RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 TIMMDC1Q9NPL8 285 aa5.2□□□□□ -1.58
FNDC3B-209ENST00000478016 BCCIPQ9P287 314 aaKnown RBP eCLIP5.2□□□□□ -1.584e-6■□□□□ 10.2
FNDC3B-209ENST00000478016 USP3Q9Y6I4 520 aa5.2□□□□□ -1.58
FNDC3B-209ENST00000478016 SENP3-EIF4A1A0A087X0R7 540 aa5.19□□□□□ -1.58
FNDC3B-209ENST00000478016 SLC35F4A4IF30 521 aa5.19□□□□□ -1.58
FNDC3B-209ENST00000478016 CSB-PGBD3P0DP91 1061 aa5.19□□□□□ -1.58
FNDC3B-209ENST00000478016 PHKA2P46019 1235 aa5.19□□□□□ -1.58
FNDC3B-209ENST00000478016 PLA2G4AP47712 749 aa5.19□□□□□ -1.58
FNDC3B-209ENST00000478016 PSMA6P60900 246 aaKnown RBP5.19□□□□□ -1.58
FNDC3B-209ENST00000478016 TMEM164Q5U3C3 297 aa5.19□□□□□ -1.58
FNDC3B-209ENST00000478016 ZNF295-AS1Q8N0V1 137 aa5.19□□□□□ -1.58
FNDC3B-209ENST00000478016 CCDC155Q8N6L0 562 aa5.19□□□□□ -1.58
FNDC3B-209ENST00000478016 GAS2L2Q8NHY3 880 aa5.19□□□□□ -1.58
FNDC3B-209ENST00000478016 CABP1Q9NZU7 370 aa5.19□□□□□ -1.58
FNDC3B-209ENST00000478016 NXF1Q9UBU9 619 aaKnown RBP5.19□□□□□ -1.58
FNDC3B-209ENST00000478016 CHMP3Q9Y3E7 222 aa5.19□□□□□ -1.58
FNDC3B-209ENST00000478016 DYRK1BQ9Y463 629 aa5.19□□□□□ -1.58
FNDC3B-209ENST00000478016 A0A1B0GTH6 734 aa5.18□□□□□ -1.58
FNDC3B-209ENST00000478016 ZBTB7CA1YPR0 619 aa5.18□□□□□ -1.58
FNDC3B-209ENST00000478016 PPP1R12BO60237 982 aaPredicted RBP5.18□□□□□ -1.58
FNDC3B-209ENST00000478016 FAM69CQ0P6D2 419 aa5.18□□□□□ -1.58
FNDC3B-209ENST00000478016 TEAD4Q15561 434 aa5.18□□□□□ -1.58
FNDC3B-209ENST00000478016 NBPF1Q3BBV0 1214 aa5.18□□□□□ -1.58
FNDC3B-209ENST00000478016 TBCELQ5QJ74 424 aa5.18□□□□□ -1.58
FNDC3B-209ENST00000478016 NPAS3Q8IXF0 933 aa5.18□□□□□ -1.58
FNDC3B-209ENST00000478016 DHX37Q8IY37 1157 aaKnown RBP5.18□□□□□ -1.58
FNDC3B-209ENST00000478016 SCG3Q8WXD2 468 aaKnown RBP5.18□□□□□ -1.58
FNDC3B-209ENST00000478016 SERTM1A2A2V5 107 aa5.17□□□□□ -1.58
FNDC3B-209ENST00000478016 PPFIA3O75145 1194 aa5.17□□□□□ -1.58
FNDC3B-209ENST00000478016 LGR5O75473 907 aa5.17□□□□□ -1.58
FNDC3B-209ENST00000478016 IGFBP4P22692 258 aa5.17□□□□□ -1.58
FNDC3B-209ENST00000478016 WEE1P30291 646 aa5.17□□□□□ -1.58
FNDC3B-209ENST00000478016 NOS2P35228 1153 aa5.17□□□□□ -1.58
FNDC3B-209ENST00000478016 STAG2Q8N3U4 1231 aa5.17□□□□□ -1.58
FNDC3B-209ENST00000478016 C1orf216Q8TAB5 229 aa5.17□□□□□ -1.58
FNDC3B-209ENST00000478016 ZDHHC1Q8WTX9 485 aa5.17□□□□□ -1.58
FNDC3B-209ENST00000478016 CLP1Q92989 425 aaKnown RBP5.17□□□□□ -1.58
FNDC3B-209ENST00000478016 L3MBTL2Q969R5 705 aa5.17□□□□□ -1.58
FNDC3B-209ENST00000478016 ZNF232Q9UNY5 417 aa5.17□□□□□ -1.58
FNDC3B-209ENST00000478016 ATAD2Q6PL18 1390 aa5.16□□□□□ -1.58
FNDC3B-209ENST00000478016 EML1O00423 815 aa5.16□□□□□ -1.58
FNDC3B-209ENST00000478016 C21orf2O43822 256 aa5.16□□□□□ -1.58
FNDC3B-209ENST00000478016 F11P03951 625 aa5.16□□□□□ -1.58
FNDC3B-209ENST00000478016 TATP17735 454 aaPredicted RBP5.16□□□□□ -1.58
FNDC3B-209ENST00000478016 ITGA6P23229 1130 aa5.16□□□□□ -1.58
FNDC3B-209ENST00000478016 HIRAP54198 1017 aaPredicted RBP5.16□□□□□ -1.58
FNDC3B-209ENST00000478016 POTEAQ6S8J7 498 aa5.16□□□□□ -1.58
FNDC3B-209ENST00000478016 RIPOR1Q6ZS17 1223 aa5.16□□□□□ -1.58
FNDC3B-209ENST00000478016 AIDAQ96BJ3 306 aa5.16□□□□□ -1.58
FNDC3B-209ENST00000478016 GAS2L1Q99501 681 aaPredicted RBP5.16□□□□□ -1.58
FNDC3B-209ENST00000478016 ZDHHC3Q9NYG2 299 aa5.16□□□□□ -1.58
FNDC3B-209ENST00000478016 USTQ9Y2C2 406 aa5.16□□□□□ -1.58
FNDC3B-209ENST00000478016 PARP3Q9Y6F1 533 aa5.16□□□□□ -1.58
FNDC3B-209ENST00000478016 TMEM88BA6NKF7 163 aa5.15□□□□□ -1.59
FNDC3B-209ENST00000478016 H3BM21 787 aa5.15□□□□□ -1.59
FNDC3B-209ENST00000478016 H7C1W4 665 aa5.15□□□□□ -1.59
FNDC3B-209ENST00000478016 TERTO14746 1132 aaKnown RBP5.15□□□□□ -1.59
FNDC3B-209ENST00000478016 FOXO3O43524 673 aa5.15□□□□□ -1.59
FNDC3B-209ENST00000478016 PRMT3O60678 531 aa5.15□□□□□ -1.59
FNDC3B-209ENST00000478016 MSX1P28360 303 aa5.15□□□□□ -1.59
FNDC3B-209ENST00000478016 OCLNQ16625 522 aa5.15□□□□□ -1.59
FNDC3B-209ENST00000478016 PGBD3Q8N328 593 aa5.15□□□□□ -1.59
FNDC3B-209ENST00000478016 SLC16A10Q8TF71 515 aa5.15□□□□□ -1.59
FNDC3B-209ENST00000478016 CHMP7Q8WUX9 453 aaPredicted RBP5.15□□□□□ -1.59
FNDC3B-209ENST00000478016 PKNOX2Q96KN3 472 aa5.15□□□□□ -1.59
FNDC3B-209ENST00000478016 PRIMPOLQ96LW4 560 aa5.15□□□□□ -1.59
FNDC3B-209ENST00000478016 C2orf49Q9BVC5 232 aaPredicted RBP5.15□□□□□ -1.59
FNDC3B-209ENST00000478016 GPAMQ9HCL2 828 aa5.15□□□□□ -1.59
FNDC3B-209ENST00000478016 ATP4AP20648 1035 aa5.14□□□□□ -1.59
FNDC3B-209ENST00000478016 VEGFBP49765 207 aa5.14□□□□□ -1.59
FNDC3B-209ENST00000478016 LBRQ14739 615 aaKnown RBP5.14□□□□□ -1.59
FNDC3B-209ENST00000478016 TRIM22Q8IYM9 498 aa5.14□□□□□ -1.59
FNDC3B-209ENST00000478016 RETREG2Q8NC44 543 aa5.14□□□□□ -1.59
FNDC3B-209ENST00000478016 VTI1AQ96AJ9 217 aa5.14□□□□□ -1.59
FNDC3B-209ENST00000478016 ZNF775Q96BV0 537 aaPredicted RBP5.14□□□□□ -1.59
FNDC3B-209ENST00000478016 GMCL1Q96IK5 515 aa5.14□□□□□ -1.59
FNDC3B-209ENST00000478016 ATP2B4P23634 1241 aa5.13□□□□□ -1.59
FNDC3B-209ENST00000478016 TXLNAP40222 546 aa5.13□□□□□ -1.59
FNDC3B-209ENST00000478016 FGD1P98174 961 aa5.13□□□□□ -1.59
FNDC3B-209ENST00000478016 ARSJQ5FYB0 599 aaPredicted RBP5.13□□□□□ -1.59
FNDC3B-209ENST00000478016 EFHC2Q5JST6 749 aa5.13□□□□□ -1.59
FNDC3B-209ENST00000478016 SH3PXD2AQ5TCZ1 1133 aa5.13□□□□□ -1.59
FNDC3B-209ENST00000478016 C1orf53Q5VUE5 145 aa5.13□□□□□ -1.59
FNDC3B-209ENST00000478016 NANOS1Q8WY41 292 aaKnown RBP5.13□□□□□ -1.59
FNDC3B-209ENST00000478016 CRISPLD1Q9H336 500 aa5.13□□□□□ -1.59
FNDC3B-209ENST00000478016 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.13□□□□□ -1.593e-6■■■■■ 30.8
FNDC3B-209ENST00000478016 CUEDC1Q9NWM3 386 aaPredicted RBP5.13□□□□□ -1.59
FNDC3B-209ENST00000478016 CXXC1Q9P0U4 656 aaPredicted RBP5.13□□□□□ -1.59
FNDC3B-209ENST00000478016 HCN4Q9Y3Q4 1203 aa5.13□□□□□ -1.59
FNDC3B-209ENST00000478016 GPC6Q9Y625 555 aaPredicted RBP5.13□□□□□ -1.59
FNDC3B-209ENST00000478016 CDC14CA4D256 554 aa5.12□□□□□ -1.59
FNDC3B-209ENST00000478016 VSIG8P0DPA2 414 aa5.12□□□□□ -1.59
FNDC3B-209ENST00000478016 NFX1Q12986 1120 aaKnown RBP5.12□□□□□ -1.59
FNDC3B-209ENST00000478016 FKBP5Q13451 457 aaPredicted RBP5.12□□□□□ -1.59
FNDC3B-209ENST00000478016 DBN1Q16643 649 aa5.12□□□□□ -1.59
FNDC3B-209ENST00000478016 BICDL1Q6ZP65 573 aa5.12□□□□□ -1.59
FNDC3B-209ENST00000478016 SV2AQ7L0J3 742 aa5.12□□□□□ -1.59
FNDC3B-209ENST00000478016 VWA5B2Q8N398 1253 aa5.12□□□□□ -1.59
FNDC3B-209ENST00000478016 IRF7Q92985 503 aa5.12□□□□□ -1.59
FNDC3B-209ENST00000478016 ZNF837Q96EG3 531 aaPredicted RBP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms