RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 TIAM2Q8IVF5 1701 aa15.56■□□□□ 0.08
LSM2-212ENST00000477182 CCDC88AQ3V6T2 1871 aa15.56■□□□□ 0.08
LSM2-212ENST00000477182 CNTNAP1P78357 1384 aa15.55■□□□□ 0.08
LSM2-212ENST00000477182 CHADLQ6NUI6 762 aa15.55■□□□□ 0.08
LSM2-212ENST00000477182 POTECB2RU33 542 aa15.54■□□□□ 0.08
LSM2-212ENST00000477182 TNNT2P45379 298 aaPredicted RBP15.54■□□□□ 0.08
LSM2-212ENST00000477182 DDR1Q08345 913 aa15.54■□□□□ 0.08
LSM2-212ENST00000477182 FKBP8Q14318 412 aa15.54■□□□□ 0.08
LSM2-212ENST00000477182 SLC4A9Q96Q91 983 aa15.54■□□□□ 0.08
LSM2-212ENST00000477182 MYH14Q7Z406 1995 aaKnown RBP15.54■□□□□ 0.08
LSM2-212ENST00000477182 USP42Q9H9J4 1324 aaKnown RBP15.53■□□□□ 0.08
LSM2-212ENST00000477182 ERVV-2B6SEH9 535 aa15.53■□□□□ 0.08
LSM2-212ENST00000477182 MLLT1Q03111 559 aaPredicted RBP15.53■□□□□ 0.08
LSM2-212ENST00000477182 RALBP1Q15311 655 aa15.53■□□□□ 0.08
LSM2-212ENST00000477182 ABHD8Q96I13 439 aa15.53■□□□□ 0.08
LSM2-212ENST00000477182 POLRMTO00411 1230 aaKnown RBP15.52■□□□□ 0.08
LSM2-212ENST00000477182 LBX1P52954 281 aa15.51■□□□□ 0.07
LSM2-212ENST00000477182 MIER1Q8N108 512 aa15.51■□□□□ 0.07
LSM2-212ENST00000477182 TTLL6Q8N841 843 aa15.51■□□□□ 0.07
LSM2-212ENST00000477182 SRP68Q9UHB9 627 aaKnown RBP15.51■□□□□ 0.07
LSM2-212ENST00000477182 DLEC1Q9Y238 1755 aa15.5■□□□□ 0.07
LSM2-212ENST00000477182 HSP90AB1P08238 724 aaKnown RBP15.5■□□□□ 0.07
LSM2-212ENST00000477182 TM4SF1P30408 202 aa15.5■□□□□ 0.07
LSM2-212ENST00000477182 WBP1LQ9NX94 342 aa15.5■□□□□ 0.07
LSM2-212ENST00000477182 MYBBP1AQ9BQG0 1328 aaKnown RBP15.49■□□□□ 0.07
LSM2-212ENST00000477182 PPP2R1AP30153 589 aa15.49■□□□□ 0.07
LSM2-212ENST00000477182 CRKLP46109 303 aaKnown RBP15.49■□□□□ 0.07
LSM2-212ENST00000477182 RGS19P49795 217 aa15.49■□□□□ 0.07
LSM2-212ENST00000477182 DICER1Q9UPY3 1922 aaKnown RBP15.49■□□□□ 0.07
LSM2-212ENST00000477182 VIRMAQ69YN4 1812 aaKnown RBP15.48■□□□□ 0.07
LSM2-212ENST00000477182 ZPR1O75312 459 aa15.48■□□□□ 0.07
LSM2-212ENST00000477182 VEGFBP49765 207 aa15.48■□□□□ 0.07
LSM2-212ENST00000477182 EYA1Q99502 592 aa15.48■□□□□ 0.07
LSM2-212ENST00000477182 EMILIN1Q9Y6C2 1016 aa15.48■□□□□ 0.07
LSM2-212ENST00000477182 TMEM88BA6NKF7 163 aa15.47■□□□□ 0.07
LSM2-212ENST00000477182 NFKBIEO00221 500 aa15.47■□□□□ 0.07
LSM2-212ENST00000477182 ERFEQ4G0M1 354 aa15.47■□□□□ 0.07
LSM2-212ENST00000477182 PASKQ96RG2 1323 aa15.46■□□□□ 0.07
LSM2-212ENST00000477182 AFDNP55196 1824 aaKnown RBP15.46■□□□□ 0.07
LSM2-212ENST00000477182 PPM1GO15355 546 aaPredicted RBP15.46■□□□□ 0.07
LSM2-212ENST00000477182 CABP4P57796 275 aa15.46■□□□□ 0.07
LSM2-212ENST00000477182 IQCA1LA6NCM1 817 aa15.45■□□□□ 0.06
LSM2-212ENST00000477182 H0YIN7 160 aa15.45■□□□□ 0.06
LSM2-212ENST00000477182 HSPA8P11142 646 aaKnown RBP15.45■□□□□ 0.06
LSM2-212ENST00000477182 MAP2K1Q02750 393 aaPredicted RBP15.45■□□□□ 0.06
LSM2-212ENST00000477182 LDHDQ86WU2 507 aa15.45■□□□□ 0.06
LSM2-212ENST00000477182 POLKQ9UBT6 870 aa15.45■□□□□ 0.06
LSM2-212ENST00000477182 NRXN2Q9P2S2 1712 aa15.44■□□□□ 0.06
LSM2-212ENST00000477182 CCDC85CA6NKD9 419 aa15.44■□□□□ 0.06
LSM2-212ENST00000477182 PTCD1O75127 700 aaKnown RBP15.44■□□□□ 0.06
LSM2-212ENST00000477182 MTHFSP49914 203 aa15.44■□□□□ 0.06
LSM2-212ENST00000477182 USPL1Q5W0Q7 1092 aa15.44■□□□□ 0.06
LSM2-212ENST00000477182 C2CD5Q86YS7 1000 aa15.44■□□□□ 0.06
LSM2-212ENST00000477182 POTEIP0CG38 1075 aa15.43■□□□□ 0.06
LSM2-212ENST00000477182 POTEJP0CG39 1038 aa15.43■□□□□ 0.06
LSM2-212ENST00000477182 ADAMTS7Q9UKP4 1686 aa15.42■□□□□ 0.06
LSM2-212ENST00000477182 CCDC184Q52MB2 194 aa15.42■□□□□ 0.06
LSM2-212ENST00000477182 PDZRN3Q9UPQ7 1066 aa15.42■□□□□ 0.06
LSM2-212ENST00000477182 SCN4AP35499 1836 aa15.42■□□□□ 0.06
LSM2-212ENST00000477182 FER1L6Q2WGJ9 1857 aa15.42■□□□□ 0.06
LSM2-212ENST00000477182 TJP1Q07157 1748 aa15.41■□□□□ 0.06
LSM2-212ENST00000477182 DDNO94850 711 aaPredicted RBP15.41■□□□□ 0.06
LSM2-212ENST00000477182 SERPINB2P05120 415 aa15.41■□□□□ 0.06
LSM2-212ENST00000477182 NFIXQ14938 502 aa15.41■□□□□ 0.06
LSM2-212ENST00000477182 DEFB115Q30KQ5 88 aa15.41■□□□□ 0.06
LSM2-212ENST00000477182 INTS5Q6P9B9 1019 aaKnown RBP15.41■□□□□ 0.06
LSM2-212ENST00000477182 LTBP3Q9NS15 1303 aa15.41■□□□□ 0.06
LSM2-212ENST00000477182 RASSF10A6NK89 507 aa15.4■□□□□ 0.06
LSM2-212ENST00000477182 PLEKHO1Q53GL0 409 aaPredicted RBP15.4■□□□□ 0.06
LSM2-212ENST00000477182 NARFQ9UHQ1 456 aa15.4■□□□□ 0.06
LSM2-212ENST00000477182 CCER2I3L3R5 266 aa15.39■□□□□ 0.05
LSM2-212ENST00000477182 ITGBL1O95965 494 aaPredicted RBP15.39■□□□□ 0.05
LSM2-212ENST00000477182 TAOK3Q9H2K8 898 aa15.39■□□□□ 0.05
LSM2-212ENST00000477182 MRS2Q9HD23 443 aa15.39■□□□□ 0.05
LSM2-212ENST00000477182 COL3A1P02461 1466 aaPredicted RBP15.39■□□□□ 0.05
LSM2-212ENST00000477182 C21orf2O43822 256 aa15.38■□□□□ 0.05
LSM2-212ENST00000477182 AMOTQ4VCS5 1084 aa15.38■□□□□ 0.05
LSM2-212ENST00000477182 L3MBTL3Q96JM7 780 aaPredicted RBP15.38■□□□□ 0.05
LSM2-212ENST00000477182 CFAP53Q96M91 514 aa15.38■□□□□ 0.05
LSM2-212ENST00000477182 BEGAINQ9BUH8 593 aa15.38■□□□□ 0.05
LSM2-212ENST00000477182 TAF1DQ9H5J8 278 aaPredicted RBP15.38■□□□□ 0.05
LSM2-212ENST00000477182 SOS1Q07889 1333 aaPredicted RBP15.38■□□□□ 0.05
LSM2-212ENST00000477182 WDR33Q9C0J8 1336 aaKnown RBP15.38■□□□□ 0.05
LSM2-212ENST00000477182 ZNF530Q6P9A1 599 aaPredicted RBP15.37■□□□□ 0.05
LSM2-212ENST00000477182 NFATC2IPQ8NCF5 419 aa15.37■□□□□ 0.05
LSM2-212ENST00000477182 ZNF622Q969S3 477 aaKnown RBP eCLIP15.37■□□□□ 0.05
LSM2-212ENST00000477182 PDE6BP35913 854 aa15.36■□□□□ 0.05
LSM2-212ENST00000477182 C1orf141Q5JVX7 400 aa15.36■□□□□ 0.05
LSM2-212ENST00000477182 SOGA3Q5TF21 947 aa15.36■□□□□ 0.05
LSM2-212ENST00000477182 EIF4A2Q14240 407 aaKnown RBP15.35■□□□□ 0.05
LSM2-212ENST00000477182 EAPPQ56P03 285 aaPredicted RBP15.35■□□□□ 0.05
LSM2-212ENST00000477182 ZNF219Q9P2Y4 722 aaPredicted RBP15.35■□□□□ 0.05
LSM2-212ENST00000477182 CLEC11AQ9Y240 323 aa15.35■□□□□ 0.05
LSM2-212ENST00000477182 COL15A1P39059 1388 aa15.35■□□□□ 0.05
LSM2-212ENST00000477182 PNMA8AQ86V59 439 aaPredicted RBP15.34■□□□□ 0.05
LSM2-212ENST00000477182 BRIP1Q9BX63 1249 aa15.34■□□□□ 0.05
LSM2-212ENST00000477182 ABT1Q9ULW3 272 aaKnown RBP15.34■□□□□ 0.05
LSM2-212ENST00000477182 CARMIL3Q8ND23 1372 aa15.34■□□□□ 0.05
LSM2-212ENST00000477182 DIAPH1O60610 1272 aaKnown RBP15.33■□□□□ 0.04
LSM2-212ENST00000477182 ECE1P42892 770 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms