RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 LARP1Q6PKG0 1096 aaKnown RBP9.71□□□□□ -0.86
LTN1-204ENST00000475344 TSEN2Q8NCE0 465 aaKnown RBP9.71□□□□□ -0.86
LTN1-204ENST00000475344 ABHD17AQ96GS6 310 aa9.71□□□□□ -0.86
LTN1-204ENST00000475344 CRISPLD1Q9H336 500 aa9.71□□□□□ -0.86
LTN1-204ENST00000475344 PHF24Q9UPV7 400 aa9.71□□□□□ -0.86
LTN1-204ENST00000475344 LBRQ14739 615 aaKnown RBP9.7□□□□□ -0.86
LTN1-204ENST00000475344 LYPD4Q6UWN0 246 aa9.7□□□□□ -0.86
LTN1-204ENST00000475344 BICDL1Q6ZP65 573 aa9.7□□□□□ -0.86
LTN1-204ENST00000475344 ZDHHC1Q8WTX9 485 aa9.7□□□□□ -0.86
LTN1-204ENST00000475344 NSFL1CQ9UNZ2 370 aaKnown RBP9.7□□□□□ -0.86
LTN1-204ENST00000475344 GTF3C3Q9Y5Q9 886 aa9.7□□□□□ -0.86
LTN1-204ENST00000475344 GJA3Q9Y6H8 435 aa9.7□□□□□ -0.86
LTN1-204ENST00000475344 TXLNAP40222 546 aa9.69□□□□□ -0.86
LTN1-204ENST00000475344 EPHA4P54764 986 aa9.69□□□□□ -0.86
LTN1-204ENST00000475344 MAP3K10Q02779 954 aa9.69□□□□□ -0.86
LTN1-204ENST00000475344 ZNF295-AS1Q8N0V1 137 aa9.69□□□□□ -0.86
LTN1-204ENST00000475344 SIX5Q8N196 739 aa9.69□□□□□ -0.86
LTN1-204ENST00000475344 C1orf216Q8TAB5 229 aa9.69□□□□□ -0.86
LTN1-204ENST00000475344 L3MBTL2Q969R5 705 aa9.69□□□□□ -0.86
LTN1-204ENST00000475344 TSPAN10Q9H1Z9 355 aaPredicted RBP9.69□□□□□ -0.86
LTN1-204ENST00000475344 VRTNQ9H8Y1 702 aa9.69□□□□□ -0.86
LTN1-204ENST00000475344 A0A1W2PNR3 127 aa9.68□□□□□ -0.86
LTN1-204ENST00000475344 LGR5O75473 907 aa9.68□□□□□ -0.86
LTN1-204ENST00000475344 RFX1P22670 979 aa9.68□□□□□ -0.86
LTN1-204ENST00000475344 NOS2P35228 1153 aa9.68□□□□□ -0.86
LTN1-204ENST00000475344 FOXK2Q01167 660 aa9.68□□□□□ -0.86
LTN1-204ENST00000475344 CRTC2Q53ET0 693 aaPredicted RBP9.68□□□□□ -0.86
LTN1-204ENST00000475344 CDCA8Q53HL2 280 aa9.68□□□□□ -0.86
LTN1-204ENST00000475344 CFHR5Q9BXR6 569 aa9.68□□□□□ -0.86
LTN1-204ENST00000475344 ZDHHC3Q9NYG2 299 aa9.68□□□□□ -0.86
LTN1-204ENST00000475344 CHMP3Q9Y3E7 222 aa9.68□□□□□ -0.86
LTN1-204ENST00000475344 BNIP3LO60238 219 aa9.67□□□□□ -0.86
LTN1-204ENST00000475344 UBAP2LQ14157 1087 aaKnown RBP9.67□□□□□ -0.86
LTN1-204ENST00000475344 SH3PXD2AQ5TCZ1 1133 aa9.67□□□□□ -0.86
LTN1-204ENST00000475344 ZCCHC2Q9C0B9 1178 aaKnown RBP9.67□□□□□ -0.86
LTN1-204ENST00000475344 ZMYND15Q9H091 742 aa9.67□□□□□ -0.86
LTN1-204ENST00000475344 ADAMTS8Q9UP79 889 aa9.67□□□□□ -0.86
LTN1-204ENST00000475344 SERTM1A2A2V5 107 aa9.66□□□□□ -0.86
LTN1-204ENST00000475344 USP17L15C9J2P7 530 aa9.66□□□□□ -0.86
LTN1-204ENST00000475344 USP17L10C9JJH3 530 aa9.66□□□□□ -0.86
LTN1-204ENST00000475344 USP17L13C9JLJ4 530 aa9.66□□□□□ -0.86
LTN1-204ENST00000475344 USP17L12C9JPN9 530 aa9.66□□□□□ -0.86
LTN1-204ENST00000475344 USP17L11C9JVI0 530 aa9.66□□□□□ -0.86
LTN1-204ENST00000475344 USP17L21D6R901 530 aa9.66□□□□□ -0.86
LTN1-204ENST00000475344 USP17L18D6R9N7 530 aa9.66□□□□□ -0.86
LTN1-204ENST00000475344 USP17L22D6RA61 530 aa9.66□□□□□ -0.86
LTN1-204ENST00000475344 USP17L17D6RBQ6 530 aa9.66□□□□□ -0.86
LTN1-204ENST00000475344 USP17L19D6RCP7 530 aa9.66□□□□□ -0.86
LTN1-204ENST00000475344 USP17L20D6RJB6 530 aa9.66□□□□□ -0.86
LTN1-204ENST00000475344 CELA2BP08218 269 aaPredicted RBP9.66□□□□□ -0.86
LTN1-204ENST00000475344 SEC13P55735 322 aa9.66□□□□□ -0.86
LTN1-204ENST00000475344 USP17L24Q0WX57 530 aa9.66□□□□□ -0.86
LTN1-204ENST00000475344 TEAD4Q15561 434 aa9.66□□□□□ -0.86
LTN1-204ENST00000475344 FIGNL1Q6PIW4 674 aa9.66□□□□□ -0.86
LTN1-204ENST00000475344 HINFPQ9BQA5 517 aa9.66□□□□□ -0.86
LTN1-204ENST00000475344 ATXN7L1Q9ULK2 861 aaPredicted RBP9.66□□□□□ -0.86
LTN1-204ENST00000475344 DCDC2BA2VCK2 349 aa9.65□□□□□ -0.86
LTN1-204ENST00000475344 ATXN7O15265 892 aaPredicted RBP9.65□□□□□ -0.86
LTN1-204ENST00000475344 FGFR3P22607 806 aa9.65□□□□□ -0.86
LTN1-204ENST00000475344 DPYDQ12882 1025 aa9.65□□□□□ -0.86
LTN1-204ENST00000475344 KANK4Q5T7N3 995 aaPredicted RBP9.65□□□□□ -0.86
LTN1-204ENST00000475344 CHMP7Q8WUX9 453 aaPredicted RBP9.65□□□□□ -0.86
LTN1-204ENST00000475344 ZIC5Q96T25 663 aa9.65□□□□□ -0.86
LTN1-204ENST00000475344 PCDHGC4Q9Y5F7 938 aa9.65□□□□□ -0.86
LTN1-204ENST00000475344 M0R2N6 131 aa9.64□□□□□ -0.87
LTN1-204ENST00000475344 KHNYNO15037 678 aaKnown RBP9.64□□□□□ -0.87
LTN1-204ENST00000475344 PPP1R12BO60237 982 aaPredicted RBP9.64□□□□□ -0.87
LTN1-204ENST00000475344 DKK1O94907 266 aa9.64□□□□□ -0.87
LTN1-204ENST00000475344 BMP4P12644 408 aa9.64□□□□□ -0.87
LTN1-204ENST00000475344 PSMA6P60900 246 aaKnown RBP9.64□□□□□ -0.87
LTN1-204ENST00000475344 PTK7Q13308 1070 aa9.64□□□□□ -0.87
LTN1-204ENST00000475344 CFAP70Q5T0N1 1121 aa9.64□□□□□ -0.87
LTN1-204ENST00000475344 NLRP8Q86W28 1048 aa9.64□□□□□ -0.87
LTN1-204ENST00000475344 ACDQ96AP0 544 aa9.64□□□□□ -0.87
LTN1-204ENST00000475344 NEUROD4Q9HD90 331 aa9.64□□□□□ -0.87
LTN1-204ENST00000475344 HCN4Q9Y3Q4 1203 aa9.64□□□□□ -0.87
LTN1-204ENST00000475344 MAP2K3P46734 347 aa9.63□□□□□ -0.87
LTN1-204ENST00000475344 CTBSQ01459 385 aa9.63□□□□□ -0.87
LTN1-204ENST00000475344 RHPN1Q8TCX5 695 aa9.63□□□□□ -0.87
LTN1-204ENST00000475344 FAM196BA6NMK8 535 aa9.62□□□□□ -0.87
LTN1-204ENST00000475344 EML1O00423 815 aa9.62□□□□□ -0.87
LTN1-204ENST00000475344 BCRP11274 1271 aa9.62□□□□□ -0.87
LTN1-204ENST00000475344 MARSP56192 900 aaKnown RBP9.62□□□□□ -0.87
LTN1-204ENST00000475344 LRRC69Q6ZNQ3 347 aa9.62□□□□□ -0.87
LTN1-204ENST00000475344 ANKMY2Q8IV38 441 aa9.62□□□□□ -0.87
LTN1-204ENST00000475344 NEDD1Q8NHV4 660 aa9.62□□□□□ -0.87
LTN1-204ENST00000475344 SCG3Q8WXD2 468 aaKnown RBP9.62□□□□□ -0.87
LTN1-204ENST00000475344 KLRG1Q96E93 195 aa9.62□□□□□ -0.87
LTN1-204ENST00000475344 OXCT2Q9BYC2 517 aaPredicted RBP9.62□□□□□ -0.87
LTN1-204ENST00000475344 ENAMQ9NRM1 1142 aa9.62□□□□□ -0.87
LTN1-204ENST00000475344 NDFIP2Q9NV92 336 aa9.62□□□□□ -0.87
LTN1-204ENST00000475344 ATAD2Q6PL18 1390 aa9.62□□□□□ -0.87
LTN1-204ENST00000475344 ARHGEF15O94989 841 aa9.61□□□□□ -0.87
LTN1-204ENST00000475344 GAS2L2Q8NHY3 880 aa9.61□□□□□ -0.87
LTN1-204ENST00000475344 C2CD2LO14523 706 aa9.6□□□□□ -0.87
LTN1-204ENST00000475344 MAPTP10636 758 aaKnown RBP9.6□□□□□ -0.87
LTN1-204ENST00000475344 CD33P20138 364 aa9.6□□□□□ -0.87
LTN1-204ENST00000475344 NGLY1Q96IV0 654 aa9.6□□□□□ -0.87
LTN1-204ENST00000475344 PHACTR1Q9C0D0 580 aa9.6□□□□□ -0.87
LTN1-204ENST00000475344 ARID3CA6NKF2 412 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms