RNA–Protein interactions for RNA: ENST00000469939.1

TTC3-213, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-213ENST00000469939 USP17L17D6RBQ6 530 aa7.24□□□□□ -1.25
TTC3-213ENST00000469939 USP17L19D6RCP7 530 aa7.24□□□□□ -1.25
TTC3-213ENST00000469939 USP17L20D6RJB6 530 aa7.24□□□□□ -1.25
TTC3-213ENST00000469939 M0R2N6 131 aa7.24□□□□□ -1.25
TTC3-213ENST00000469939 USP17L24Q0WX57 530 aa7.24□□□□□ -1.25
TTC3-213ENST00000469939 TMEM151AQ8N4L1 468 aa7.24□□□□□ -1.25
TTC3-213ENST00000469939 PBXIP1Q96AQ6 731 aa7.24□□□□□ -1.25
TTC3-213ENST00000469939 NIFKQ9BYG3 293 aaKnown RBP7.24□□□□□ -1.25
TTC3-213ENST00000469939 SCHIP1Q9P0W5 487 aaPredicted RBP7.24□□□□□ -1.25
TTC3-213ENST00000469939 IQSEC3Q9UPP2 1182 aaPredicted RBP7.24□□□□□ -1.25
TTC3-213ENST00000469939 SFI1A8K8P3 1242 aa7.23□□□□□ -1.25
TTC3-213ENST00000469939 RNF225M0QZC1 329 aaPredicted RBP7.23□□□□□ -1.25
TTC3-213ENST00000469939 EPHA4P54764 986 aa7.23□□□□□ -1.25
TTC3-213ENST00000469939 SEC13P55735 322 aa7.23□□□□□ -1.25
TTC3-213ENST00000469939 CDCA8Q53HL2 280 aa7.23□□□□□ -1.25
TTC3-213ENST00000469939 TNS4Q8IZW8 715 aa7.23□□□□□ -1.25
TTC3-213ENST00000469939 NANOS1Q8WY41 292 aaKnown RBP7.23□□□□□ -1.25
TTC3-213ENST00000469939 GAS2L1Q99501 681 aaPredicted RBP7.23□□□□□ -1.25
TTC3-213ENST00000469939 USP3Q9Y6I4 520 aa7.23□□□□□ -1.25
TTC3-213ENST00000469939 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.22□□□□□ -1.25
TTC3-213ENST00000469939 A0A1B0GTH6 734 aa7.22□□□□□ -1.25
TTC3-213ENST00000469939 PATL2C9JE40 543 aaKnown RBP7.22□□□□□ -1.25
TTC3-213ENST00000469939 GDF11O95390 407 aa7.22□□□□□ -1.25
TTC3-213ENST00000469939 BRD1O95696 1058 aa7.22□□□□□ -1.25
TTC3-213ENST00000469939 RBM25P49756 843 aaKnown RBP7.22□□□□□ -1.25
TTC3-213ENST00000469939 SRPK2P78362 688 aaKnown RBP7.22□□□□□ -1.25
TTC3-213ENST00000469939 FOXK2Q01167 660 aa7.22□□□□□ -1.25
TTC3-213ENST00000469939 KCNA1Q09470 495 aa7.22□□□□□ -1.25
TTC3-213ENST00000469939 DPYDQ12882 1025 aa7.22□□□□□ -1.25
TTC3-213ENST00000469939 ANKMY2Q8IV38 441 aa7.22□□□□□ -1.25
TTC3-213ENST00000469939 ZNF295-AS1Q8N0V1 137 aa7.22□□□□□ -1.25
TTC3-213ENST00000469939 GPR161Q8N6U8 529 aaKnown RBP7.22□□□□□ -1.25
TTC3-213ENST00000469939 CDC14CA4D256 554 aa7.21□□□□□ -1.26
TTC3-213ENST00000469939 F11P03951 625 aa7.21□□□□□ -1.26
TTC3-213ENST00000469939 PLA2G4AP47712 749 aa7.21□□□□□ -1.26
TTC3-213ENST00000469939 RASSF7Q02833 373 aa7.21□□□□□ -1.26
TTC3-213ENST00000469939 RIPOR1Q6ZS17 1223 aa7.21□□□□□ -1.26
TTC3-213ENST00000469939 SLC9A9Q8IVB4 645 aa7.21□□□□□ -1.26
TTC3-213ENST00000469939 TSEN2Q8NCE0 465 aaKnown RBP7.21□□□□□ -1.26
TTC3-213ENST00000469939 CUEDC1Q9NWM3 386 aaPredicted RBP7.21□□□□□ -1.26
TTC3-213ENST00000469939 CABP1Q9NZU7 370 aa7.21□□□□□ -1.26
TTC3-213ENST00000469939 ADAMTS8Q9UP79 889 aa7.21□□□□□ -1.26
TTC3-213ENST00000469939 USTQ9Y2C2 406 aa7.21□□□□□ -1.26
TTC3-213ENST00000469939 H7C1W4 665 aa7.2□□□□□ -1.26
TTC3-213ENST00000469939 KRT76Q01546 638 aa7.2□□□□□ -1.26
TTC3-213ENST00000469939 SV2AQ7L0J3 742 aa7.2□□□□□ -1.26
TTC3-213ENST00000469939 TRIM22Q8IYM9 498 aa7.2□□□□□ -1.26
TTC3-213ENST00000469939 VWA5B2Q8N398 1253 aa7.2□□□□□ -1.26
TTC3-213ENST00000469939 SVOPQ8N4V2 548 aa7.2□□□□□ -1.26
TTC3-213ENST00000469939 GMCL1Q96IK5 515 aa7.2□□□□□ -1.26
TTC3-213ENST00000469939 COL25A1Q9BXS0 654 aaPredicted RBP7.2□□□□□ -1.26
TTC3-213ENST00000469939 GPAMQ9HCL2 828 aa7.2□□□□□ -1.26
TTC3-213ENST00000469939 MSX1P28360 303 aa7.19□□□□□ -1.26
TTC3-213ENST00000469939 TBCELQ5QJ74 424 aa7.19□□□□□ -1.26
TTC3-213ENST00000469939 AIDAQ96BJ3 306 aa7.19□□□□□ -1.26
TTC3-213ENST00000469939 TSPAN10Q9H1Z9 355 aaPredicted RBP7.19□□□□□ -1.26
TTC3-213ENST00000469939 NOVA2Q9UNW9 492 aaKnown RBP7.19□□□□□ -1.26
TTC3-213ENST00000469939 CARNS1A5YM72 827 aa7.18□□□□□ -1.26
TTC3-213ENST00000469939 CSB-PGBD3P0DP91 1061 aa7.18□□□□□ -1.26
TTC3-213ENST00000469939 GSK3AP49840 483 aa7.18□□□□□ -1.26
TTC3-213ENST00000469939 TEAD4Q15561 434 aa7.18□□□□□ -1.26
TTC3-213ENST00000469939 DBN1Q16643 649 aa7.18□□□□□ -1.26
TTC3-213ENST00000469939 NBPF1Q3BBV0 1214 aa7.18□□□□□ -1.26
TTC3-213ENST00000469939 C1orf216Q8TAB5 229 aa7.18□□□□□ -1.26
TTC3-213ENST00000469939 FAM200AQ8TCP9 573 aa7.18□□□□□ -1.26
TTC3-213ENST00000469939 ZNF837Q96EG3 531 aaPredicted RBP7.18□□□□□ -1.26
TTC3-213ENST00000469939 HINFPQ9BQA5 517 aa7.18□□□□□ -1.26
TTC3-213ENST00000469939 PARP3Q9Y6F1 533 aa7.18□□□□□ -1.26
TTC3-213ENST00000469939 NOS2P35228 1153 aa7.17□□□□□ -1.26
TTC3-213ENST00000469939 ELOAQ14241 798 aaKnown RBP7.17□□□□□ -1.26
TTC3-213ENST00000469939 PGBD3Q8N328 593 aa7.17□□□□□ -1.26
TTC3-213ENST00000469939 ZDHHC1Q8WTX9 485 aa7.17□□□□□ -1.26
TTC3-213ENST00000469939 L3MBTL2Q969R5 705 aa7.17□□□□□ -1.26
TTC3-213ENST00000469939 NUCKS1Q9H1E3 243 aaKnown RBP7.17□□□□□ -1.26
TTC3-213ENST00000469939 ZDHHC3Q9NYG2 299 aa7.17□□□□□ -1.26
TTC3-213ENST00000469939 LOC105371045A0A1W2PR82 267 aa7.16□□□□□ -1.26
TTC3-213ENST00000469939 SERTM1A2A2V5 107 aa7.16□□□□□ -1.26
TTC3-213ENST00000469939 ATG7O95352 703 aa7.16□□□□□ -1.26
TTC3-213ENST00000469939 ATP4AP20648 1035 aa7.16□□□□□ -1.26
TTC3-213ENST00000469939 PSMA6P60900 246 aaKnown RBP7.16□□□□□ -1.26
TTC3-213ENST00000469939 CRISPLD1Q9H336 500 aa7.16□□□□□ -1.26
TTC3-213ENST00000469939 RUBCNLQ9H714 662 aa7.16□□□□□ -1.26
TTC3-213ENST00000469939 ZMIZ1Q9ULJ6 1067 aa7.16□□□□□ -1.26
TTC3-213ENST00000469939 ZNF232Q9UNY5 417 aa7.16□□□□□ -1.26
TTC3-213ENST00000469939 CHMP3Q9Y3E7 222 aa7.16□□□□□ -1.26
TTC3-213ENST00000469939 C21orf2O43822 256 aa7.15□□□□□ -1.26
TTC3-213ENST00000469939 PPP1R12BO60237 982 aaPredicted RBP7.15□□□□□ -1.26
TTC3-213ENST00000469939 TATP17735 454 aaPredicted RBP7.15□□□□□ -1.26
TTC3-213ENST00000469939 LBRQ14739 615 aaKnown RBP7.15□□□□□ -1.26
TTC3-213ENST00000469939 ZNF385CQ66K41 422 aaPredicted RBP7.15□□□□□ -1.26
TTC3-213ENST00000469939 FOXR1Q6PIV2 292 aa7.15□□□□□ -1.26
TTC3-213ENST00000469939 GAS2L2Q8NHY3 880 aa7.15□□□□□ -1.26
TTC3-213ENST00000469939 SCG3Q8WXD2 468 aaKnown RBP7.15□□□□□ -1.26
TTC3-213ENST00000469939 ATAD2Q6PL18 1390 aa7.15□□□□□ -1.26
TTC3-213ENST00000469939 EML1O00423 815 aa7.14□□□□□ -1.27
TTC3-213ENST00000469939 IGSF3O75054 1194 aa7.14□□□□□ -1.27
TTC3-213ENST00000469939 LGR5O75473 907 aa7.14□□□□□ -1.27
TTC3-213ENST00000469939 THBS1P07996 1170 aa7.14□□□□□ -1.27
TTC3-213ENST00000469939 IRS1P35568 1242 aa7.14□□□□□ -1.27
TTC3-213ENST00000469939 TXLNAP40222 546 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms