RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 CEBPAP49715 358 aaPredicted RBP9.78□□□□□ -0.84
BRCC3-208ENST00000453705 BIRC2Q13490 618 aa9.78□□□□□ -0.84
BRCC3-208ENST00000453705 COMMD10Q9Y6G5 202 aa9.78□□□□□ -0.84
BRCC3-208ENST00000453705 SCNN1AP37088 669 aa9.77□□□□□ -0.85
BRCC3-208ENST00000453705 FMNL3Q8IVF7 1028 aa9.77□□□□□ -0.85
BRCC3-208ENST00000453705 CPSF1Q10570 1443 aaKnown RBP9.77□□□□□ -0.85
BRCC3-208ENST00000453705 NWD1Q149M9 1564 aa9.77□□□□□ -0.85
BRCC3-208ENST00000453705 PPP1R37O75864 691 aa9.77□□□□□ -0.85
BRCC3-208ENST00000453705 PLEKHG6Q3KR16 790 aa9.77□□□□□ -0.85
BRCC3-208ENST00000453705 JAZF1Q86VZ6 243 aa9.77□□□□□ -0.85
BRCC3-208ENST00000453705 CARD14Q9BXL6 1004 aa9.77□□□□□ -0.85
BRCC3-208ENST00000453705 NUDCQ9Y266 331 aa9.77□□□□□ -0.85
BRCC3-208ENST00000453705 FMN2Q9NZ56 1722 aa9.77□□□□□ -0.85
BRCC3-208ENST00000453705 FECHP22830 423 aa9.76□□□□□ -0.85
BRCC3-208ENST00000453705 AMOTL1Q8IY63 956 aa9.76□□□□□ -0.85
BRCC3-208ENST00000453705 GTF2F1P35269 517 aaKnown RBP eCLIP9.76□□□□□ -0.85
BRCC3-208ENST00000453705 BMS1Q14692 1282 aaKnown RBP9.76□□□□□ -0.85
BRCC3-208ENST00000453705 HSP90AB2PQ58FF8 381 aa9.76□□□□□ -0.85
BRCC3-208ENST00000453705 PMFBP1Q8TBY8 1022 aa9.76□□□□□ -0.85
BRCC3-208ENST00000453705 KDM4FA0A1W2PPD8 638 aa9.75□□□□□ -0.85
BRCC3-208ENST00000453705 PDAP1Q13442 181 aaKnown RBP9.75□□□□□ -0.85
BRCC3-208ENST00000453705 IRF2BPLQ9H1B7 796 aa9.75□□□□□ -0.85
BRCC3-208ENST00000453705 ABL2P42684 1182 aa9.75□□□□□ -0.85
BRCC3-208ENST00000453705 CACTIN-AS1Q8N1I8 211 aa9.75□□□□□ -0.85
BRCC3-208ENST00000453705 POLR3EQ9NVU0 708 aa9.75□□□□□ -0.85
BRCC3-208ENST00000453705 TPX2Q9ULW0 747 aaKnown RBP9.75□□□□□ -0.85
BRCC3-208ENST00000453705 ZNF521Q96K83 1311 aa9.75□□□□□ -0.85
BRCC3-208ENST00000453705 IRF6O14896 467 aa9.74□□□□□ -0.85
BRCC3-208ENST00000453705 MMP14P50281 582 aa9.74□□□□□ -0.85
BRCC3-208ENST00000453705 CASC1Q6TDU7 716 aa9.74□□□□□ -0.85
BRCC3-208ENST00000453705 TSPAN18Q96SJ8 248 aa9.74□□□□□ -0.85
BRCC3-208ENST00000453705 TRAK1Q9UPV9 953 aa9.74□□□□□ -0.85
BRCC3-208ENST00000453705 AMHR2Q16671 573 aa9.74□□□□□ -0.85
BRCC3-208ENST00000453705 NOP9Q86U38 636 aaKnown RBP9.74□□□□□ -0.85
BRCC3-208ENST00000453705 DDX27Q96GQ7 796 aaKnown RBP9.74□□□□□ -0.85
BRCC3-208ENST00000453705 RYDENQ9NUL5 291 aaKnown RBP9.74□□□□□ -0.85
BRCC3-208ENST00000453705 APPP05067 770 aa9.73□□□□□ -0.85
BRCC3-208ENST00000453705 GIGYF2Q6Y7W6 1299 aaKnown RBP9.73□□□□□ -0.85
BRCC3-208ENST00000453705 GNEQ9Y223 722 aaKnown RBP9.73□□□□□ -0.85
BRCC3-208ENST00000453705 EDC4Q6P2E9 1401 aaKnown RBP9.73□□□□□ -0.85
BRCC3-208ENST00000453705 EIF3JO75822 258 aaKnown RBP9.73□□□□□ -0.85
BRCC3-208ENST00000453705 DDX46Q7L014 1031 aaKnown RBP9.73□□□□□ -0.85
BRCC3-208ENST00000453705 FRMD4BQ9Y2L6 1034 aa9.73□□□□□ -0.85
BRCC3-208ENST00000453705 NOP58Q9Y2X3 529 aaKnown RBP9.73□□□□□ -0.85
BRCC3-208ENST00000453705 A0A1W2PP64 1363 aa9.73□□□□□ -0.85
BRCC3-208ENST00000453705 ANKRD33BA6NCL7 494 aa9.72□□□□□ -0.85
BRCC3-208ENST00000453705 METP08581 1390 aa9.72□□□□□ -0.85
BRCC3-208ENST00000453705 TMEM132EQ6IEE7 984 aa9.72□□□□□ -0.85
BRCC3-208ENST00000453705 PNPLA6Q8IY17 1366 aa9.72□□□□□ -0.85
BRCC3-208ENST00000453705 RAVER1Q8IY67 606 aaKnown RBP9.72□□□□□ -0.85
BRCC3-208ENST00000453705 ZNF830Q96NB3 372 aaPredicted RBP9.72□□□□□ -0.85
BRCC3-208ENST00000453705 COL4A3BPQ9Y5P4 624 aa9.72□□□□□ -0.85
BRCC3-208ENST00000453705 MRPL42Q9Y6G3 142 aaKnown RBP9.72□□□□□ -0.85
BRCC3-208ENST00000453705 ANKARQ7Z5J8 1434 aa9.72□□□□□ -0.85
BRCC3-208ENST00000453705 LIG1P18858 919 aa9.72□□□□□ -0.85
BRCC3-208ENST00000453705 NUTM2DQ5VT03 806 aaPredicted RBP9.72□□□□□ -0.85
BRCC3-208ENST00000453705 PHLDB3Q6NSJ2 640 aa9.72□□□□□ -0.85
BRCC3-208ENST00000453705 THEMISQ8N1K5 641 aaPredicted RBP9.72□□□□□ -0.85
BRCC3-208ENST00000453705 AATKQ6ZMQ8 1374 aa9.71□□□□□ -0.86
BRCC3-208ENST00000453705 MAP2P11137 1827 aaKnown RBP9.71□□□□□ -0.86
BRCC3-208ENST00000453705 MARF1Q9Y4F3 1742 aaKnown RBP9.71□□□□□ -0.86
BRCC3-208ENST00000453705 CSPP1Q1MSJ5 1256 aa9.71□□□□□ -0.86
BRCC3-208ENST00000453705 C1orf131Q8NDD1 294 aaKnown RBP9.71□□□□□ -0.86
BRCC3-208ENST00000453705 CCDC85AQ96PX6 553 aaPredicted RBP9.71□□□□□ -0.86
BRCC3-208ENST00000453705 MAP9Q49MG5 647 aa9.7□□□□□ -0.86
BRCC3-208ENST00000453705 NEUROD6Q96NK8 337 aa9.7□□□□□ -0.86
BRCC3-208ENST00000453705 ZSWIM4Q9H7M6 989 aa9.7□□□□□ -0.86
BRCC3-208ENST00000453705 EID1Q9Y6B2 187 aa9.7□□□□□ -0.86
BRCC3-208ENST00000453705 USP5P45974 858 aa9.7□□□□□ -0.86
BRCC3-208ENST00000453705 ENOX2Q16206 610 aaKnown RBP9.7□□□□□ -0.86
BRCC3-208ENST00000453705 ZNF467Q7Z7K2 595 aaPredicted RBP9.7□□□□□ -0.86
BRCC3-208ENST00000453705 PIK3R5Q8WYR1 880 aa9.7□□□□□ -0.86
BRCC3-208ENST00000453705 BACH2Q9BYV9 841 aa9.7□□□□□ -0.86
BRCC3-208ENST00000453705 PDZRN3Q9UPQ7 1066 aa9.7□□□□□ -0.86
BRCC3-208ENST00000453705 RGPD1P0DJD0 1748 aa9.7□□□□□ -0.86
BRCC3-208ENST00000453705 PTPRUQ92729 1446 aa9.7□□□□□ -0.86
BRCC3-208ENST00000453705 PHRF1Q9P1Y6 1649 aaKnown RBP9.7□□□□□ -0.86
BRCC3-208ENST00000453705 NCKAP5LQ9HCH0 1330 aa9.7□□□□□ -0.86
BRCC3-208ENST00000453705 HDLBPQ00341 1268 aaKnown RBP9.69□□□□□ -0.86
BRCC3-208ENST00000453705 TRMT2AQ8IZ69 625 aaKnown RBP9.69□□□□□ -0.86
BRCC3-208ENST00000453705 TSR2Q969E8 191 aaKnown RBP9.69□□□□□ -0.86
BRCC3-208ENST00000453705 ZNF512BQ96KM6 892 aaPredicted RBP9.69□□□□□ -0.86
BRCC3-208ENST00000453705 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.69□□□□□ -0.862e-6■■■■■ 96.1
BRCC3-208ENST00000453705 PUF60Q9UHX1 559 aaKnown RBP9.69□□□□□ -0.86
BRCC3-208ENST00000453705 CDK12Q9NYV4 1490 aaPredicted RBP9.69□□□□□ -0.86
BRCC3-208ENST00000453705 SPDYE2BA6NHP3 402 aa9.69□□□□□ -0.86
BRCC3-208ENST00000453705 SPDYE5A6NIY4 337 aa9.69□□□□□ -0.86
BRCC3-208ENST00000453705 SPDYE6P0CI01 402 aa9.69□□□□□ -0.86
BRCC3-208ENST00000453705 SERPINB4P48594 390 aa9.69□□□□□ -0.86
BRCC3-208ENST00000453705 TERF1P54274 439 aa9.69□□□□□ -0.86
BRCC3-208ENST00000453705 SPDYE2Q495Y8 402 aa9.69□□□□□ -0.86
BRCC3-208ENST00000453705 CC2D1BQ5T0F9 858 aaKnown RBP9.69□□□□□ -0.86
BRCC3-208ENST00000453705 PRAM1Q96QH2 718 aa9.69□□□□□ -0.86
BRCC3-208ENST00000453705 LRRC27Q9C0I9 530 aa9.69□□□□□ -0.86
BRCC3-208ENST00000453705 TBC1D2BQ9UPU7 963 aa9.69□□□□□ -0.86
BRCC3-208ENST00000453705 HMGB1P1B2RPK0 211 aaPredicted RBP9.69□□□□□ -0.86
BRCC3-208ENST00000453705 JDP2Q8WYK2 163 aa9.69□□□□□ -0.86
BRCC3-208ENST00000453705 PRKAG2Q9UGJ0 569 aa9.69□□□□□ -0.86
BRCC3-208ENST00000453705 SFMBT1Q9UHJ3 866 aa9.69□□□□□ -0.86
BRCC3-208ENST00000453705 SSH2Q76I76 1423 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms