RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 UBAP1LF5GYI3 381 aa13.69□□□□□ -0.22
FN1-212ENST00000446046 FOXO3O43524 673 aa13.69□□□□□ -0.22
FN1-212ENST00000446046 TNMDQ9H2S6 317 aa13.69□□□□□ -0.22
FN1-212ENST00000446046 TSPY26PQ9H489 355 aa13.69□□□□□ -0.22
FN1-212ENST00000446046 NBPF8Q3BBV2 869 aa13.69□□□□□ -0.22
FN1-212ENST00000446046 NBPF14Q5TI25 921 aa13.69□□□□□ -0.22
FN1-212ENST00000446046 CETN1Q12798 172 aa13.69□□□□□ -0.22
FN1-212ENST00000446046 CABP5Q9NP86 173 aa13.69□□□□□ -0.22
FN1-212ENST00000446046 CWC25Q9NXE8 425 aaPredicted RBP13.69□□□□□ -0.22
FN1-212ENST00000446046 PLEKHH1Q9ULM0 1364 aa13.68□□□□□ -0.22
FN1-212ENST00000446046 SSBP05455 408 aaKnown RBP eCLIP13.68□□□□□ -0.22
FN1-212ENST00000446046 NF2P35240 595 aa13.68□□□□□ -0.22
FN1-212ENST00000446046 CCDC178Q5BJE1 867 aa13.68□□□□□ -0.22
FN1-212ENST00000446046 NKTRP30414 1462 aaKnown RBP13.68□□□□□ -0.22
FN1-212ENST00000446046 POLD1P28340 1107 aa13.68□□□□□ -0.22
FN1-212ENST00000446046 C6orf229H3BNL8 230 aa13.68□□□□□ -0.22
FN1-212ENST00000446046 CCDC152Q4G0S7 254 aa13.68□□□□□ -0.22
FN1-212ENST00000446046 CWC15Q9P013 229 aaKnown RBP13.68□□□□□ -0.22
FN1-212ENST00000446046 WDR7Q9Y4E6 1490 aa13.68□□□□□ -0.22
FN1-212ENST00000446046 WDR78Q5VTH9 848 aa13.68□□□□□ -0.22
FN1-212ENST00000446046 ABCC5O15440 1437 aa13.68□□□□□ -0.22
FN1-212ENST00000446046 CCDC96Q2M329 555 aa13.68□□□□□ -0.22
FN1-212ENST00000446046 KDM5AP29375 1690 aaKnown RBP13.67□□□□□ -0.22
FN1-212ENST00000446046 MINDY4BA8MYZ0 360 aa13.67□□□□□ -0.22
FN1-212ENST00000446046 A2MP01023 1474 aa13.67□□□□□ -0.22
FN1-212ENST00000446046 STK11IPQ8N1F8 1099 aa13.67□□□□□ -0.22
FN1-212ENST00000446046 SETDB2Q96T68 719 aa13.67□□□□□ -0.22
FN1-212ENST00000446046 PATL2C9JE40 543 aaKnown RBP13.66□□□□□ -0.22
FN1-212ENST00000446046 NAIPQ13075 1403 aa13.66□□□□□ -0.22
FN1-212ENST00000446046 PDRG1Q9NUG6 133 aa13.66□□□□□ -0.22
FN1-212ENST00000446046 CWC27Q6UX04 472 aaKnown RBP13.66□□□□□ -0.22
FN1-212ENST00000446046 C1orf115Q9H7X2 142 aa13.66□□□□□ -0.22
FN1-212ENST00000446046 TSR2Q969E8 191 aaKnown RBP13.66□□□□□ -0.22
FN1-212ENST00000446046 URB2Q14146 1524 aaKnown RBP13.66□□□□□ -0.22
FN1-212ENST00000446046 CAVIN1Q6NZI2 390 aaKnown RBP13.65□□□□□ -0.22
FN1-212ENST00000446046 ANAPC15P60006 121 aa13.65□□□□□ -0.22
FN1-212ENST00000446046 TTLL5Q6EMB2 1281 aa13.65□□□□□ -0.22
FN1-212ENST00000446046 WAPLQ7Z5K2 1190 aa13.65□□□□□ -0.22
FN1-212ENST00000446046 FERMT1Q9BQL6 677 aa13.65□□□□□ -0.22
FN1-212ENST00000446046 ZNF213O14771 459 aa13.65□□□□□ -0.22
FN1-212ENST00000446046 KDM4AO75164 1064 aa13.65□□□□□ -0.22
FN1-212ENST00000446046 MYD88Q99836 296 aa13.65□□□□□ -0.22
FN1-212ENST00000446046 ASXL2Q76L83 1435 aa13.65□□□□□ -0.22
FN1-212ENST00000446046 ZNF771Q7L3S4 317 aaPredicted RBP13.65□□□□□ -0.23
FN1-212ENST00000446046 MAP7D2Q96T17 732 aa13.64□□□□□ -0.23
FN1-212ENST00000446046 RALGAPBQ86X10 1494 aa13.64□□□□□ -0.23
FN1-212ENST00000446046 FIBPO43427 364 aa13.64□□□□□ -0.23
FN1-212ENST00000446046 CEBPZQ03701 1054 aaKnown RBP13.64□□□□□ -0.23
FN1-212ENST00000446046 SEPT11Q9NVA2 429 aaKnown RBP13.64□□□□□ -0.23
FN1-212ENST00000446046 AMPD3Q01432 767 aa13.64□□□□□ -0.23
FN1-212ENST00000446046 NBPF6Q5VWK0 638 aa13.64□□□□□ -0.23
FN1-212ENST00000446046 NBPF5PQ86XG9 351 aaPredicted RBP13.64□□□□□ -0.23
FN1-212ENST00000446046 NBPF4Q96M43 638 aa13.64□□□□□ -0.23
FN1-212ENST00000446046 MRE11P49959 708 aa13.64□□□□□ -0.23
FN1-212ENST00000446046 KIAA0556O60303 1618 aa13.64□□□□□ -0.23
FN1-212ENST00000446046 ABCC10Q5T3U5 1492 aa13.63□□□□□ -0.23
FN1-212ENST00000446046 SLC12A7Q9Y666 1083 aa13.63□□□□□ -0.23
FN1-212ENST00000446046 HMGN5P82970 282 aaKnown RBP13.63□□□□□ -0.23
FN1-212ENST00000446046 ZNF622Q969S3 477 aaKnown RBP eCLIP13.63□□□□□ -0.23
FN1-212ENST00000446046 CCDC97Q96F63 343 aaPredicted RBP13.63□□□□□ -0.23
FN1-212ENST00000446046 JAKMIP1Q96N16 626 aaKnown RBP13.63□□□□□ -0.23
FN1-212ENST00000446046 C11orf95C9JLR9 678 aaPredicted RBP13.63□□□□□ -0.23
FN1-212ENST00000446046 SPATA32Q96LK8 384 aa13.63□□□□□ -0.23
FN1-212ENST00000446046 SNRPA1P09661 255 aaKnown RBP13.63□□□□□ -0.23
FN1-212ENST00000446046 STK3Q13188 491 aa13.63□□□□□ -0.23
FN1-212ENST00000446046 FANCIQ9NVI1 1328 aa13.63□□□□□ -0.23
FN1-212ENST00000446046 GOLGA6L7A0A1B0GV03 622 aa13.63□□□□□ -0.23
FN1-212ENST00000446046 K7ELQ4 463 aaPredicted RBP13.63□□□□□ -0.23
FN1-212ENST00000446046 KIF4AO95239 1232 aa13.63□□□□□ -0.23
FN1-212ENST00000446046 LRRC27Q9C0I9 530 aa13.63□□□□□ -0.23
FN1-212ENST00000446046 TRPM2O94759 1503 aa13.63□□□□□ -0.23
FN1-212ENST00000446046 PIK3R4Q99570 1358 aa13.63□□□□□ -0.23
FN1-212ENST00000446046 SH2B1Q9NRF2 756 aaPredicted RBP13.63□□□□□ -0.23
FN1-212ENST00000446046 PDZRN3Q9UPQ7 1066 aa13.63□□□□□ -0.23
FN1-212ENST00000446046 BCAR3O75815 825 aa13.62□□□□□ -0.23
FN1-212ENST00000446046 FKBP15Q5T1M5 1219 aa13.62□□□□□ -0.23
FN1-212ENST00000446046 SYCP2Q9BX26 1530 aa13.62□□□□□ -0.23
FN1-212ENST00000446046 ADAMTS12P58397 1594 aa13.62□□□□□ -0.23
FN1-212ENST00000446046 ABCA5Q8WWZ7 1642 aa13.62□□□□□ -0.23
FN1-212ENST00000446046 CASTP20810 708 aaKnown RBP13.62□□□□□ -0.23
FN1-212ENST00000446046 LRRC45Q96CN5 670 aa13.62□□□□□ -0.23
FN1-212ENST00000446046 CRNKL1Q9BZJ0 848 aaKnown RBP13.62□□□□□ -0.23
FN1-212ENST00000446046 ASXL1Q8IXJ9 1541 aa13.61□□□□□ -0.23
FN1-212ENST00000446046 EIF5P55010 431 aaKnown RBP13.61□□□□□ -0.23
FN1-212ENST00000446046 KIAA1328Q86T90 577 aa13.61□□□□□ -0.23
FN1-212ENST00000446046 SSRP1Q08945 709 aaKnown RBP13.61□□□□□ -0.23
FN1-212ENST00000446046 DNAAF4Q8WXU2 420 aa13.61□□□□□ -0.23
FN1-212ENST00000446046 SPINK5Q9NQ38 1064 aaPredicted RBP13.61□□□□□ -0.23
FN1-212ENST00000446046 EPB41L2O43491 1005 aaKnown RBP13.61□□□□□ -0.23
FN1-212ENST00000446046 RANBP6O60518 1105 aaKnown RBP13.61□□□□□ -0.23
FN1-212ENST00000446046 USP37Q86T82 979 aa13.61□□□□□ -0.23
FN1-212ENST00000446046 CALML4Q96GE6 196 aa13.61□□□□□ -0.23
FN1-212ENST00000446046 NCBP1Q09161 790 aaKnown RBP13.61□□□□□ -0.23
FN1-212ENST00000446046 CCDC91Q7Z6B0 441 aa13.61□□□□□ -0.23
FN1-212ENST00000446046 FAM43AQ8N2R8 423 aa13.61□□□□□ -0.23
FN1-212ENST00000446046 ANKRD36BQ8N2N9 1353 aa13.6□□□□□ -0.23
FN1-212ENST00000446046 LMOD1P29536 600 aaPredicted RBP13.6□□□□□ -0.23
FN1-212ENST00000446046 ENOX2Q16206 610 aaKnown RBP13.6□□□□□ -0.23
FN1-212ENST00000446046 UQCRFS1P1P0C7P4 283 aa13.6□□□□□ -0.23
FN1-212ENST00000446046 IDI1Q13907 227 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms