RNA–Protein interactions for RNA: ENST00000444457.5

PMPCB-204, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 2,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-204ENST00000444457 CASC1Q6TDU7 716 aa22.96■■□□□ 1.27
PMPCB-204ENST00000444457 NECTIN2Q92692 538 aa22.95■■□□□ 1.26
PMPCB-204ENST00000444457 PRIMPOLQ96LW4 560 aa22.95■■□□□ 1.26
PMPCB-204ENST00000444457 NFAT5O94916 1531 aa22.95■■□□□ 1.26
PMPCB-204ENST00000444457 GTF2F1P35269 517 aaKnown RBP eCLIP22.94■■□□□ 1.26
PMPCB-204ENST00000444457 USHBP1Q8N6Y0 703 aa22.94■■□□□ 1.26
PMPCB-204ENST00000444457 OSBPL3Q9H4L5 887 aa22.94■■□□□ 1.26
PMPCB-204ENST00000444457 GNAI3P08754 354 aa22.94■■□□□ 1.26
PMPCB-204ENST00000444457 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.94■■□□□ 1.26
PMPCB-204ENST00000444457 MBD3O95983 291 aa22.93■■□□□ 1.26
PMPCB-204ENST00000444457 PXDNLA1KZ92 1463 aa22.93■■□□□ 1.26
PMPCB-204ENST00000444457 SETD1BQ9UPS6 1966 aaKnown RBP22.93■■□□□ 1.26
PMPCB-204ENST00000444457 TUBGCP6Q96RT7 1819 aa22.93■■□□□ 1.26
PMPCB-204ENST00000444457 ZNF710Q8N1W2 664 aa22.93■■□□□ 1.26
PMPCB-204ENST00000444457 ZGPATQ8N5A5 531 aaKnown RBP22.93■■□□□ 1.26
PMPCB-204ENST00000444457 NSFL1CQ9UNZ2 370 aaKnown RBP22.93■■□□□ 1.26
PMPCB-204ENST00000444457 ZNF142P52746 1687 aaPredicted RBP22.92■■□□□ 1.26
PMPCB-204ENST00000444457 PDE1AP54750 535 aa22.92■■□□□ 1.26
PMPCB-204ENST00000444457 IP6K1Q92551 441 aa22.92■■□□□ 1.26
PMPCB-204ENST00000444457 GTPBP4Q9BZE4 634 aaKnown RBP22.92■■□□□ 1.26
PMPCB-204ENST00000444457 EXOC6BQ9Y2D4 811 aa22.92■■□□□ 1.26
PMPCB-204ENST00000444457 HMGN5P82970 282 aaKnown RBP22.91■■□□□ 1.26
PMPCB-204ENST00000444457 ANKLE2Q86XL3 938 aa22.91■■□□□ 1.26
PMPCB-204ENST00000444457 ST18O60284 1047 aa22.9■■□□□ 1.26
PMPCB-204ENST00000444457 CEMIPQ8WUJ3 1361 aa22.9■■□□□ 1.26
PMPCB-204ENST00000444457 MED1Q15648 1581 aaPredicted RBP22.9■■□□□ 1.26
PMPCB-204ENST00000444457 PTMAP06454 111 aaKnown RBP22.9■■□□□ 1.26
PMPCB-204ENST00000444457 PNMA6EA0A0J9YXQ4 647 aa22.89■■□□□ 1.26
PMPCB-204ENST00000444457 ATP8B2P98198 1209 aa22.89■■□□□ 1.26
PMPCB-204ENST00000444457 RNF214Q8ND24 703 aa22.89■■□□□ 1.26
PMPCB-204ENST00000444457 RGPD2P0DJD1 1756 aa22.89■■□□□ 1.25
PMPCB-204ENST00000444457 SALL3Q9BXA9 1300 aa22.89■■□□□ 1.25
PMPCB-204ENST00000444457 REC8O95072 547 aa22.89■■□□□ 1.25
PMPCB-204ENST00000444457 PIBF1Q8WXW3 757 aa22.89■■□□□ 1.25
PMPCB-204ENST00000444457 PHRF1Q9P1Y6 1649 aaKnown RBP22.88■■□□□ 1.25
PMPCB-204ENST00000444457 ADGRL3Q9HAR2 1447 aa22.88■■□□□ 1.25
PMPCB-204ENST00000444457 RBM33Q96EV2 1170 aaKnown RBP22.88■■□□□ 1.25
PMPCB-204ENST00000444457 LRRCC1Q9C099 1032 aa22.88■■□□□ 1.25
PMPCB-204ENST00000444457 KDM3BQ7LBC6 1761 aa22.87■■□□□ 1.25
PMPCB-204ENST00000444457 KIF20AO95235 890 aa22.87■■□□□ 1.25
PMPCB-204ENST00000444457 HDGFL1Q5TGJ6 251 aa22.87■■□□□ 1.25
PMPCB-204ENST00000444457 TSPY26PQ9H489 355 aa22.87■■□□□ 1.25
PMPCB-204ENST00000444457 NBPF6Q5VWK0 638 aa22.87■■□□□ 1.25
PMPCB-204ENST00000444457 NBPF4Q96M43 638 aa22.87■■□□□ 1.25
PMPCB-204ENST00000444457 ERC2O15083 957 aa22.86■■□□□ 1.25
PMPCB-204ENST00000444457 DNTTIP2Q5QJE6 756 aaKnown RBP22.86■■□□□ 1.25
PMPCB-204ENST00000444457 LRRFIP2Q9Y608 721 aaKnown RBP22.86■■□□□ 1.25
PMPCB-204ENST00000444457 CHAMP1Q96JM3 812 aa22.85■■□□□ 1.25
PMPCB-204ENST00000444457 LMO7Q8WWI1 1683 aa22.85■■□□□ 1.25
PMPCB-204ENST00000444457 JARID2Q92833 1246 aaPredicted RBP22.85■■□□□ 1.25
PMPCB-204ENST00000444457 USP44Q9H0E7 712 aa22.85■■□□□ 1.25
PMPCB-204ENST00000444457 FGD1P98174 961 aa22.84■■□□□ 1.25
PMPCB-204ENST00000444457 PSME1Q06323 249 aa22.84■■□□□ 1.25
PMPCB-204ENST00000444457 ESCO1Q5FWF5 840 aa22.84■■□□□ 1.25
PMPCB-204ENST00000444457 KCNH5Q8NCM2 988 aa22.84■■□□□ 1.25
PMPCB-204ENST00000444457 PHAXQ9H814 394 aaKnown RBP22.84■■□□□ 1.25
PMPCB-204ENST00000444457 LETM1O95202 739 aaPredicted RBP22.83■■□□□ 1.25
PMPCB-204ENST00000444457 MX1P20591 662 aa22.83■■□□□ 1.25
PMPCB-204ENST00000444457 NOLC1Q14978 699 aaKnown RBP eCLIP22.83■■□□□ 1.25
PMPCB-204ENST00000444457 TSHZ3Q63HK5 1081 aa22.83■■□□□ 1.25
PMPCB-204ENST00000444457 UBTFL1P0CB47 393 aaPredicted RBP22.83■■□□□ 1.24
PMPCB-204ENST00000444457 TSC1Q92574 1164 aa22.83■■□□□ 1.24
PMPCB-204ENST00000444457 CBX1P83916 185 aa22.82■■□□□ 1.24
PMPCB-204ENST00000444457 LGR6Q9HBX8 967 aa22.82■■□□□ 1.24
PMPCB-204ENST00000444457 EIF4A1P60842 406 aaKnown RBP22.82■■□□□ 1.24
PMPCB-204ENST00000444457 SYAP1Q96A49 352 aaPredicted RBP22.82■■□□□ 1.24
PMPCB-204ENST00000444457 ZBTB7CA1YPR0 619 aa22.81■■□□□ 1.24
PMPCB-204ENST00000444457 ATP2B3Q16720 1220 aa22.81■■□□□ 1.24
PMPCB-204ENST00000444457 PPP4R3BQ5MIZ7 849 aa22.81■■□□□ 1.24
PMPCB-204ENST00000444457 SPTLC3Q9NUV7 552 aa22.81■■□□□ 1.24
PMPCB-204ENST00000444457 KIF3AQ9Y496 699 aa22.81■■□□□ 1.24
PMPCB-204ENST00000444457 HOXB7P09629 217 aa22.8■■□□□ 1.24
PMPCB-204ENST00000444457 UVSSAQ2YD98 709 aa22.8■■□□□ 1.24
PMPCB-204ENST00000444457 BRD1O95696 1058 aa22.79■■□□□ 1.24
PMPCB-204ENST00000444457 EIF2S2P20042 333 aaKnown RBP22.79■■□□□ 1.24
PMPCB-204ENST00000444457 FAM184AQ8NB25 1140 aa22.79■■□□□ 1.24
PMPCB-204ENST00000444457 STAP2Q9UGK3 403 aa22.79■■□□□ 1.24
PMPCB-204ENST00000444457 SSH3Q8TE77 659 aa22.78■■□□□ 1.24
PMPCB-204ENST00000444457 LRRC59Q96AG4 307 aaKnown RBP22.78■■□□□ 1.24
PMPCB-204ENST00000444457 SRCIN1Q9C0H9 1055 aa22.78■■□□□ 1.24
PMPCB-204ENST00000444457 PHF14O94880 888 aa22.78■■□□□ 1.24
PMPCB-204ENST00000444457 AKAP4Q5JQC9 854 aa22.78■■□□□ 1.24
PMPCB-204ENST00000444457 ESYT1Q9BSJ8 1104 aa22.78■■□□□ 1.24
PMPCB-204ENST00000444457 ZNF530Q6P9A1 599 aaPredicted RBP22.77■■□□□ 1.24
PMPCB-204ENST00000444457 CHPF2Q9P2E5 772 aa22.77■■□□□ 1.24
PMPCB-204ENST00000444457 SLIT3O75094 1523 aa22.76■■□□□ 1.23
PMPCB-204ENST00000444457 NCAPD2Q15021 1401 aa22.76■■□□□ 1.23
PMPCB-204ENST00000444457 KCNQ3O43525 872 aa22.76■■□□□ 1.23
PMPCB-204ENST00000444457 TEFQ10587 303 aa22.76■■□□□ 1.23
PMPCB-204ENST00000444457 CHMP4AQ9BY43 222 aa22.76■■□□□ 1.23
PMPCB-204ENST00000444457 BCL2L12Q9HB09 334 aa22.76■■□□□ 1.23
PMPCB-204ENST00000444457 AOX1Q06278 1338 aa22.76■■□□□ 1.23
PMPCB-204ENST00000444457 KDM4FA0A1W2PPD8 638 aa22.75■■□□□ 1.23
PMPCB-204ENST00000444457 PLEKHO1Q53GL0 409 aaPredicted RBP22.75■■□□□ 1.23
PMPCB-204ENST00000444457 TRIM6-TRIM34B2RNG4 842 aa22.75■■□□□ 1.23
PMPCB-204ENST00000444457 POLA2Q14181 598 aa22.75■■□□□ 1.23
PMPCB-204ENST00000444457 RILPL2Q969X0 211 aa22.75■■□□□ 1.23
PMPCB-204ENST00000444457 ZNF830Q96NB3 372 aaPredicted RBP22.75■■□□□ 1.23
PMPCB-204ENST00000444457 PXDNQ92626 1479 aa22.74■■□□□ 1.23
PMPCB-204ENST00000444457 CHMLP26374 656 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 915.5 ms