RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 TINF2Q9BSI4 451 aa6.14□□□□□ -1.43
CDC42BPA-207ENST00000441725 C2orf49Q9BVC5 232 aaPredicted RBP6.14□□□□□ -1.43
CDC42BPA-207ENST00000441725 QTRT2Q9H974 415 aaKnown RBP6.14□□□□□ -1.43
CDC42BPA-207ENST00000441725 LRFN2Q9ULH4 789 aa6.14□□□□□ -1.43
CDC42BPA-207ENST00000441725 ANKLE1Q8NAG6 615 aa6.13□□□□□ -1.43
CDC42BPA-207ENST00000441725 MAP4K5Q9Y4K4 846 aa6.13□□□□□ -1.43
CDC42BPA-207ENST00000441725 PPEF1O14829 653 aaPredicted RBP6.13□□□□□ -1.43
CDC42BPA-207ENST00000441725 FOXK2Q01167 660 aa6.13□□□□□ -1.43
CDC42BPA-207ENST00000441725 ALKBH2Q6NS38 261 aa6.13□□□□□ -1.43
CDC42BPA-207ENST00000441725 SLC9A9Q8IVB4 645 aa6.13□□□□□ -1.43
CDC42BPA-207ENST00000441725 SLC4A9Q96Q91 983 aa6.13□□□□□ -1.43
CDC42BPA-207ENST00000441725 TANGO6Q9C0B7 1094 aa6.13□□□□□ -1.43
CDC42BPA-207ENST00000441725 SCHIP1Q9P0W5 487 aaPredicted RBP6.13□□□□□ -1.43
CDC42BPA-207ENST00000441725 VTI1BQ9UEU0 232 aa6.13□□□□□ -1.43
CDC42BPA-207ENST00000441725 PSMD2Q13200 908 aa6.12□□□□□ -1.43
CDC42BPA-207ENST00000441725 ALKBH8Q96BT7 664 aaKnown RBP6.12□□□□□ -1.43
CDC42BPA-207ENST00000441725 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.12□□□□□ -1.438e-8■■■■■ 59.6
CDC42BPA-207ENST00000441725 V9GY48 417 aaPredicted RBP6.12□□□□□ -1.43
CDC42BPA-207ENST00000441725 SKOR1P84550 965 aa6.11□□□□□ -1.43
CDC42BPA-207ENST00000441725 FGD1P98174 961 aa6.11□□□□□ -1.43
CDC42BPA-207ENST00000441725 PDE3BQ13370 1112 aa6.11□□□□□ -1.43
CDC42BPA-207ENST00000441725 GIMAP6Q6P9H5 292 aa6.11□□□□□ -1.43
CDC42BPA-207ENST00000441725 DPH6Q7L8W6 267 aa6.11□□□□□ -1.43
CDC42BPA-207ENST00000441725 ZNF784Q8NCA9 323 aaPredicted RBP6.11□□□□□ -1.43
CDC42BPA-207ENST00000441725 RNF34Q969K3 372 aa6.11□□□□□ -1.43
CDC42BPA-207ENST00000441725 NIF3L1Q9GZT8 377 aa6.11□□□□□ -1.43
CDC42BPA-207ENST00000441725 FSHRP23945 695 aa6.11□□□□□ -1.43
CDC42BPA-207ENST00000441725 VARSP26640 1264 aaKnown RBP6.11□□□□□ -1.43
CDC42BPA-207ENST00000441725 ATP2B2Q01814 1243 aa6.11□□□□□ -1.43
CDC42BPA-207ENST00000441725 ARID5BQ14865 1188 aa6.11□□□□□ -1.43
CDC42BPA-207ENST00000441725 STAG2Q8N3U4 1231 aa6.11□□□□□ -1.43
CDC42BPA-207ENST00000441725 DNAJC2Q99543 621 aaKnown RBP6.11□□□□□ -1.43
CDC42BPA-207ENST00000441725 TGIF2Q9GZN2 237 aa6.11□□□□□ -1.43
CDC42BPA-207ENST00000441725 METTL5Q9NRN9 209 aaKnown RBP6.11□□□□□ -1.43
CDC42BPA-207ENST00000441725 RAB6BQ9NRW1 208 aa6.11□□□□□ -1.43
CDC42BPA-207ENST00000441725 USP3Q9Y6I4 520 aa6.11□□□□□ -1.43
CDC42BPA-207ENST00000441725 PNMA6FA0A0J9YX94 578 aa6.1□□□□□ -1.43
CDC42BPA-207ENST00000441725 A6NJY4 79 aa6.1□□□□□ -1.43
CDC42BPA-207ENST00000441725 CANXP27824 592 aaKnown RBP6.1□□□□□ -1.43
CDC42BPA-207ENST00000441725 TRIM32Q13049 653 aa6.1□□□□□ -1.43
CDC42BPA-207ENST00000441725 POLIQ9UNA4 740 aa6.1□□□□□ -1.43
CDC42BPA-207ENST00000441725 CADPSQ9ULU8 1353 aa6.1□□□□□ -1.43
CDC42BPA-207ENST00000441725 ZNF76P36508 570 aa6.1□□□□□ -1.43
CDC42BPA-207ENST00000441725 MTFR1Q15390 333 aa6.1□□□□□ -1.43
CDC42BPA-207ENST00000441725 ENOX2Q16206 610 aaKnown RBP6.1□□□□□ -1.43
CDC42BPA-207ENST00000441725 EMID1Q96A84 441 aaPredicted RBP6.1□□□□□ -1.43
CDC42BPA-207ENST00000441725 ACBD3Q9H3P7 528 aa6.1□□□□□ -1.43
CDC42BPA-207ENST00000441725 CAPN10Q9HC96 672 aa6.1□□□□□ -1.43
CDC42BPA-207ENST00000441725 PRKAG2Q9UGJ0 569 aa6.1□□□□□ -1.43
CDC42BPA-207ENST00000441725 EMILIN1Q9Y6C2 1016 aa6.1□□□□□ -1.43
CDC42BPA-207ENST00000441725 PPM1GO15355 546 aaPredicted RBP6.09□□□□□ -1.43
CDC42BPA-207ENST00000441725 LILRA1O75019 489 aa6.09□□□□□ -1.43
CDC42BPA-207ENST00000441725 GRM5P41594 1212 aa6.09□□□□□ -1.43
CDC42BPA-207ENST00000441725 TNNI2P48788 182 aa6.09□□□□□ -1.43
CDC42BPA-207ENST00000441725 SMTNP53814 917 aa6.09□□□□□ -1.43
CDC42BPA-207ENST00000441725 PSMA6P60900 246 aaKnown RBP6.09□□□□□ -1.43
CDC42BPA-207ENST00000441725 GJD3Q8N144 294 aa6.09□□□□□ -1.43
CDC42BPA-207ENST00000441725 ABTB2Q8N961 1025 aa6.09□□□□□ -1.43
CDC42BPA-207ENST00000441725 CFHR5Q9BXR6 569 aa6.09□□□□□ -1.43
CDC42BPA-207ENST00000441725 CCSER2Q9H7U1 834 aa6.09□□□□□ -1.43
CDC42BPA-207ENST00000441725 GNRH1P01148 92 aa6.08□□□□□ -1.44
CDC42BPA-207ENST00000441725 PLA2G2CQ5R387 149 aa6.08□□□□□ -1.44
CDC42BPA-207ENST00000441725 SH3PXD2AQ5TCZ1 1133 aa6.08□□□□□ -1.44
CDC42BPA-207ENST00000441725 MYO19Q96H55 970 aa6.08□□□□□ -1.44
CDC42BPA-207ENST00000441725 ZBTB24O43167 697 aaPredicted RBP6.08□□□□□ -1.44
CDC42BPA-207ENST00000441725 SLC19A1P41440 591 aa6.08□□□□□ -1.44
CDC42BPA-207ENST00000441725 DNM1Q05193 864 aaKnown RBP6.08□□□□□ -1.44
CDC42BPA-207ENST00000441725 CYP2U1Q7Z449 544 aa6.08□□□□□ -1.44
CDC42BPA-207ENST00000441725 ETFBKMTQ8IXQ9 262 aa6.08□□□□□ -1.44
CDC42BPA-207ENST00000441725 DHX38Q92620 1227 aaKnown RBP6.08□□□□□ -1.44
CDC42BPA-207ENST00000441725 NGLY1Q96IV0 654 aa6.08□□□□□ -1.44
CDC42BPA-207ENST00000441725 IRX2Q9BZI1 471 aaPredicted RBP6.08□□□□□ -1.44
CDC42BPA-207ENST00000441725 BRD2P25440 801 aaKnown RBP6.07□□□□□ -1.44
CDC42BPA-207ENST00000441725 GNA15P30679 374 aa6.07□□□□□ -1.44
CDC42BPA-207ENST00000441725 ADD1P35611 737 aaKnown RBP6.07□□□□□ -1.44
CDC42BPA-207ENST00000441725 ALG1LQ6GMV1 187 aa6.07□□□□□ -1.44
CDC42BPA-207ENST00000441725 LIAT1Q6ZQX7 453 aa6.07□□□□□ -1.44
CDC42BPA-207ENST00000441725 SLC43A3Q8NBI5 491 aa6.07□□□□□ -1.44
CDC42BPA-207ENST00000441725 CDK15Q96Q40 435 aa6.07□□□□□ -1.44
CDC42BPA-207ENST00000441725 LNPKQ9C0E8 428 aa6.07□□□□□ -1.44
CDC42BPA-207ENST00000441725 ARHGEF10LQ9HCE6 1279 aa6.07□□□□□ -1.44
CDC42BPA-207ENST00000441725 IQSEC3Q9UPP2 1182 aaPredicted RBP6.07□□□□□ -1.44
CDC42BPA-207ENST00000441725 CTSHP09668 335 aa6.07□□□□□ -1.44
CDC42BPA-207ENST00000441725 ITGAEP38570 1179 aa6.07□□□□□ -1.44
CDC42BPA-207ENST00000441725 WNT7BP56706 349 aa6.07□□□□□ -1.44
CDC42BPA-207ENST00000441725 DHX9Q08211 1270 aaKnown RBP6.07□□□□□ -1.44
CDC42BPA-207ENST00000441725 ESCO1Q5FWF5 840 aa6.07□□□□□ -1.44
CDC42BPA-207ENST00000441725 POTEAQ6S8J7 498 aa6.07□□□□□ -1.44
CDC42BPA-207ENST00000441725 TLL2Q9Y6L7 1015 aa6.07□□□□□ -1.44
CDC42BPA-207ENST00000441725 IL2RAP01589 272 aa6.06□□□□□ -1.44
CDC42BPA-207ENST00000441725 GTF2F1P35269 517 aaKnown RBP eCLIP6.06□□□□□ -1.44
CDC42BPA-207ENST00000441725 ORC1Q13415 861 aa6.06□□□□□ -1.44
CDC42BPA-207ENST00000441725 EHBP1Q8NDI1 1231 aa6.06□□□□□ -1.44
CDC42BPA-207ENST00000441725 EDEM1Q92611 657 aa6.06□□□□□ -1.44
CDC42BPA-207ENST00000441725 EML1O00423 815 aa6.06□□□□□ -1.44
CDC42BPA-207ENST00000441725 PDGFAP04085 211 aa6.06□□□□□ -1.44
CDC42BPA-207ENST00000441725 MZF1P28698 734 aaPredicted RBP6.06□□□□□ -1.44
CDC42BPA-207ENST00000441725 DNAJA1P31689 397 aaKnown RBP6.06□□□□□ -1.44
CDC42BPA-207ENST00000441725 PPP1R26Q5T8A7 1209 aaPredicted RBP6.06□□□□□ -1.44
CDC42BPA-207ENST00000441725 SPRYD7Q5W111 196 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms