RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 CLASRPQ8N2M8 674 aaKnown RBP20.26■□□□□ 0.83
TTC3-209ENST00000438055 IFIT2P09913 472 aaKnown RBP20.26■□□□□ 0.83
TTC3-209ENST00000438055 ZDHHC9Q9Y397 364 aa20.26■□□□□ 0.83
TTC3-209ENST00000438055 ERBB4Q15303 1308 aa20.26■□□□□ 0.83
TTC3-209ENST00000438055 RAB11FIP3O75154 756 aa20.25■□□□□ 0.83
TTC3-209ENST00000438055 GPT2Q8TD30 523 aa20.24■□□□□ 0.83
TTC3-209ENST00000438055 CHMP4AQ9BY43 222 aa20.24■□□□□ 0.83
TTC3-209ENST00000438055 EIF4A1P60842 406 aaKnown RBP20.24■□□□□ 0.83
TTC3-209ENST00000438055 SSH3Q8TE77 659 aa20.24■□□□□ 0.83
TTC3-209ENST00000438055 IP6K1Q92551 441 aa20.24■□□□□ 0.83
TTC3-209ENST00000438055 HSP90AB4PQ58FF6 505 aa20.23■□□□□ 0.83
TTC3-209ENST00000438055 RBSNQ9H1K0 784 aa20.23■□□□□ 0.83
TTC3-209ENST00000438055 PA2G4Q9UQ80 394 aaKnown RBP20.23■□□□□ 0.83
TTC3-209ENST00000438055 RIMS1Q86UR5 1692 aaKnown RBP20.23■□□□□ 0.83
TTC3-209ENST00000438055 SETD1BQ9UPS6 1966 aaKnown RBP20.23■□□□□ 0.83
TTC3-209ENST00000438055 CYP2E1P05181 493 aaPredicted RBP20.23■□□□□ 0.83
TTC3-209ENST00000438055 PLCB2Q00722 1185 aa20.23■□□□□ 0.83
TTC3-209ENST00000438055 SIL1Q9H173 461 aa20.23■□□□□ 0.83
TTC3-209ENST00000438055 MAP3K2Q9Y2U5 619 aa20.23■□□□□ 0.83
TTC3-209ENST00000438055 PEAK1Q9H792 1746 aa20.23■□□□□ 0.83
TTC3-209ENST00000438055 CPA1P15085 419 aa20.22■□□□□ 0.83
TTC3-209ENST00000438055 IL25Q9H293 177 aa20.22■□□□□ 0.83
TTC3-209ENST00000438055 NSFL1CQ9UNZ2 370 aaKnown RBP20.22■□□□□ 0.83
TTC3-209ENST00000438055 SSH2Q76I76 1423 aa20.22■□□□□ 0.83
TTC3-209ENST00000438055 ANAPC15P60006 121 aa20.22■□□□□ 0.83
TTC3-209ENST00000438055 CLEC17AQ6ZS10 378 aa20.22■□□□□ 0.83
TTC3-209ENST00000438055 ANKLE2Q86XL3 938 aa20.22■□□□□ 0.83
TTC3-209ENST00000438055 GPATCH3Q96I76 525 aa20.22■□□□□ 0.83
TTC3-209ENST00000438055 MBD3O95983 291 aa20.21■□□□□ 0.83
TTC3-209ENST00000438055 CWF19L2Q2TBE0 894 aaKnown RBP20.21■□□□□ 0.83
TTC3-209ENST00000438055 TMEM63CQ9P1W3 806 aa20.21■□□□□ 0.83
TTC3-209ENST00000438055 AKAP12Q02952 1782 aa20.21■□□□□ 0.83
TTC3-209ENST00000438055 STAP2Q9UGK3 403 aa20.21■□□□□ 0.83
TTC3-209ENST00000438055 SYAP1Q96A49 352 aaPredicted RBP20.21■□□□□ 0.83
TTC3-209ENST00000438055 AACSQ86V21 672 aa20.2■□□□□ 0.82
TTC3-209ENST00000438055 DBF4Q9UBU7 674 aaPredicted RBP20.2■□□□□ 0.82
TTC3-209ENST00000438055 SMC3Q9UQE7 1217 aa20.2■□□□□ 0.82
TTC3-209ENST00000438055 CASTP20810 708 aaKnown RBP20.2■□□□□ 0.82
TTC3-209ENST00000438055 MPNDQ8N594 471 aa20.2■□□□□ 0.82
TTC3-209ENST00000438055 ZNF445P59923 1031 aa20.19■□□□□ 0.82
TTC3-209ENST00000438055 ZC3H6P61129 1189 aaKnown RBP20.19■□□□□ 0.82
TTC3-209ENST00000438055 KCNH5Q8NCM2 988 aa20.19■□□□□ 0.82
TTC3-209ENST00000438055 NRKQ7Z2Y5 1582 aa20.19■□□□□ 0.82
TTC3-209ENST00000438055 RUFY2Q8WXA3 655 aa20.19■□□□□ 0.82
TTC3-209ENST00000438055 CCDC9Q9Y3X0 531 aaKnown RBP20.19■□□□□ 0.82
TTC3-209ENST00000438055 MYL6BP14649 208 aa20.18■□□□□ 0.82
TTC3-209ENST00000438055 G3BP1Q13283 466 aaKnown RBP eCLIP20.18■□□□□ 0.82
TTC3-209ENST00000438055 BEND3Q5T5X7 828 aa20.18■□□□□ 0.82
TTC3-209ENST00000438055 ZSCAN30Q86W11 494 aa20.18■□□□□ 0.82
TTC3-209ENST00000438055 SALL3Q9BXA9 1300 aa20.18■□□□□ 0.82
TTC3-209ENST00000438055 WDR33Q9C0J8 1336 aaKnown RBP20.18■□□□□ 0.82
TTC3-209ENST00000438055 GLRX3O76003 335 aaKnown RBP20.18■□□□□ 0.82
TTC3-209ENST00000438055 PRPF40BQ6NWY9 871 aaKnown RBP20.18■□□□□ 0.82
TTC3-209ENST00000438055 FIBPO43427 364 aa20.17■□□□□ 0.82
TTC3-209ENST00000438055 RIC3Q7Z5B4 369 aa20.17■□□□□ 0.82
TTC3-209ENST00000438055 JAKMIP1Q96N16 626 aaKnown RBP20.17■□□□□ 0.82
TTC3-209ENST00000438055 ORAI2Q96SN7 254 aa20.17■□□□□ 0.82
TTC3-209ENST00000438055 BABAM1Q9NWV8 329 aa20.17■□□□□ 0.82
TTC3-209ENST00000438055 UBR1Q8IWV7 1749 aa20.17■□□□□ 0.82
TTC3-209ENST00000438055 PRAMEF22A3QJZ6 481 aa20.17■□□□□ 0.82
TTC3-209ENST00000438055 BRD1O95696 1058 aa20.17■□□□□ 0.82
TTC3-209ENST00000438055 CSB-PGBD3P0DP91 1061 aa20.17■□□□□ 0.82
TTC3-209ENST00000438055 PROSER3Q2NL68 480 aa20.17■□□□□ 0.82
TTC3-209ENST00000438055 AKAP4Q5JQC9 854 aa20.17■□□□□ 0.82
TTC3-209ENST00000438055 NLRP2Q9NX02 1062 aa20.17■□□□□ 0.82
TTC3-209ENST00000438055 CCDC8Q9H0W5 538 aaPredicted RBP20.17■□□□□ 0.82
TTC3-209ENST00000438055 DIP2AQ14689 1571 aa20.16■□□□□ 0.82
TTC3-209ENST00000438055 SGSM2O43147 1006 aa20.16■□□□□ 0.82
TTC3-209ENST00000438055 VPS37CA5D8V6 355 aaPredicted RBP20.16■□□□□ 0.82
TTC3-209ENST00000438055 GCP02774 474 aa20.16■□□□□ 0.82
TTC3-209ENST00000438055 ANKRD24Q8TF21 1146 aa20.16■□□□□ 0.82
TTC3-209ENST00000438055 HSPA4P34932 840 aa20.15■□□□□ 0.82
TTC3-209ENST00000438055 CCDC83Q8IWF9 413 aa20.15■□□□□ 0.82
TTC3-209ENST00000438055 AK2P54819 239 aa20.15■□□□□ 0.82
TTC3-209ENST00000438055 SLC39A6Q13433 755 aa20.15■□□□□ 0.82
TTC3-209ENST00000438055 LRSAM1Q6UWE0 723 aa20.15■□□□□ 0.82
TTC3-209ENST00000438055 RASEFQ8IZ41 740 aa20.15■□□□□ 0.82
TTC3-209ENST00000438055 SNX14Q9Y5W7 946 aa20.15■□□□□ 0.82
TTC3-209ENST00000438055 DDX58O95786 925 aaKnown RBP20.15■□□□□ 0.82
TTC3-209ENST00000438055 PI4K2BQ8TCG2 481 aa20.15■□□□□ 0.82
TTC3-209ENST00000438055 INTS4Q96HW7 963 aaKnown RBP20.15■□□□□ 0.82
TTC3-209ENST00000438055 JARID2Q92833 1246 aaPredicted RBP20.14■□□□□ 0.82
TTC3-209ENST00000438055 ECHDC1Q9NTX5 307 aa20.14■□□□□ 0.82
TTC3-209ENST00000438055 CHMP3Q9Y3E7 222 aa20.14■□□□□ 0.82
TTC3-209ENST00000438055 ZKSCAN1P17029 563 aaPredicted RBP20.14■□□□□ 0.81
TTC3-209ENST00000438055 TSPY26PQ9H489 355 aa20.14■□□□□ 0.81
TTC3-209ENST00000438055 HDAC5Q9UQL6 1122 aa20.14■□□□□ 0.81
TTC3-209ENST00000438055 RNMTO43148 476 aaKnown RBP20.14■□□□□ 0.81
TTC3-209ENST00000438055 GADD45BO75293 160 aaPredicted RBP20.14■□□□□ 0.81
TTC3-209ENST00000438055 USP48Q86UV5 1035 aa20.14■□□□□ 0.81
TTC3-209ENST00000438055 CUL4AQ13619 759 aa20.13■□□□□ 0.81
TTC3-209ENST00000438055 AMOTQ4VCS5 1084 aa20.13■□□□□ 0.81
TTC3-209ENST00000438055 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.13■□□□□ 0.81
TTC3-209ENST00000438055 RAD50Q92878 1312 aa20.13■□□□□ 0.81
TTC3-209ENST00000438055 POLA2Q14181 598 aa20.13■□□□□ 0.81
TTC3-209ENST00000438055 RAPGEF4Q8WZA2 1011 aa20.13■□□□□ 0.81
TTC3-209ENST00000438055 BOLA2Q9H3K6 86 aa20.13■□□□□ 0.81
TTC3-209ENST00000438055 LIMCH1Q9UPQ0 1083 aa20.13■□□□□ 0.81
TTC3-209ENST00000438055 FSD1Q9BTV5 496 aa20.13■□□□□ 0.81
TTC3-209ENST00000438055 PIP4K2AP48426 406 aaPredicted RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms