RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 EPHA4P54764 986 aa10.29□□□□□ -0.76
HMGB3P5-201ENST00000428894 FOXK2Q01167 660 aa10.29□□□□□ -0.76
HMGB3P5-201ENST00000428894 TBCELQ5QJ74 424 aa10.29□□□□□ -0.76
HMGB3P5-201ENST00000428894 NSFL1CQ9UNZ2 370 aaKnown RBP10.29□□□□□ -0.76
HMGB3P5-201ENST00000428894 ADAMTS8Q9UP79 889 aa10.29□□□□□ -0.76
HMGB3P5-201ENST00000428894 RBM19Q9Y4C8 960 aaKnown RBP10.29□□□□□ -0.76
HMGB3P5-201ENST00000428894 TATP17735 454 aaPredicted RBP10.28□□□□□ -0.76
HMGB3P5-201ENST00000428894 ARSJQ5FYB0 599 aaPredicted RBP10.28□□□□□ -0.76
HMGB3P5-201ENST00000428894 SLC9A9Q8IVB4 645 aa10.28□□□□□ -0.76
HMGB3P5-201ENST00000428894 ZDHHC3Q9NYG2 299 aa10.28□□□□□ -0.76
HMGB3P5-201ENST00000428894 CELA2BP08218 269 aaPredicted RBP10.27□□□□□ -0.77
HMGB3P5-201ENST00000428894 LMOD1P29536 600 aaPredicted RBP10.27□□□□□ -0.77
HMGB3P5-201ENST00000428894 SIX5Q8N196 739 aa10.27□□□□□ -0.77
HMGB3P5-201ENST00000428894 ZDHHC1Q8WTX9 485 aa10.27□□□□□ -0.77
HMGB3P5-201ENST00000428894 A0A1W2PNR3 127 aa10.26□□□□□ -0.77
HMGB3P5-201ENST00000428894 SFI1A8K8P3 1242 aa10.26□□□□□ -0.77
HMGB3P5-201ENST00000428894 ARHGEF15O94989 841 aa10.26□□□□□ -0.77
HMGB3P5-201ENST00000428894 NOS2P35228 1153 aa10.26□□□□□ -0.77
HMGB3P5-201ENST00000428894 MAP3K10Q02779 954 aa10.26□□□□□ -0.77
HMGB3P5-201ENST00000428894 TEAD4Q15561 434 aa10.26□□□□□ -0.77
HMGB3P5-201ENST00000428894 LARP1Q6PKG0 1096 aaKnown RBP10.26□□□□□ -0.77
HMGB3P5-201ENST00000428894 L3MBTL2Q969R5 705 aa10.26□□□□□ -0.77
HMGB3P5-201ENST00000428894 ABHD17AQ96GS6 310 aa10.26□□□□□ -0.77
HMGB3P5-201ENST00000428894 ZCCHC2Q9C0B9 1178 aaKnown RBP10.26□□□□□ -0.77
HMGB3P5-201ENST00000428894 M0R2N6 131 aa10.25□□□□□ -0.77
HMGB3P5-201ENST00000428894 BNIP3LO60238 219 aa10.25□□□□□ -0.77
HMGB3P5-201ENST00000428894 DKK1O94907 266 aa10.25□□□□□ -0.77
HMGB3P5-201ENST00000428894 TXLNAP40222 546 aa10.25□□□□□ -0.77
HMGB3P5-201ENST00000428894 FIGNL1Q6PIW4 674 aa10.25□□□□□ -0.77
HMGB3P5-201ENST00000428894 NLRP8Q86W28 1048 aa10.25□□□□□ -0.77
HMGB3P5-201ENST00000428894 TSEN2Q8NCE0 465 aaKnown RBP10.25□□□□□ -0.77
HMGB3P5-201ENST00000428894 ZIC5Q96T25 663 aa10.25□□□□□ -0.77
HMGB3P5-201ENST00000428894 ATXN7L1Q9ULK2 861 aaPredicted RBP10.25□□□□□ -0.77
HMGB3P5-201ENST00000428894 ZNF232Q9UNY5 417 aa10.25□□□□□ -0.77
HMGB3P5-201ENST00000428894 MAP2K3P46734 347 aa10.24□□□□□ -0.77
HMGB3P5-201ENST00000428894 KANK4Q5T7N3 995 aaPredicted RBP10.24□□□□□ -0.77
HMGB3P5-201ENST00000428894 BICDL1Q6ZP65 573 aa10.24□□□□□ -0.77
HMGB3P5-201ENST00000428894 ACDQ96AP0 544 aa10.24□□□□□ -0.77
HMGB3P5-201ENST00000428894 TSPAN10Q9H1Z9 355 aaPredicted RBP10.24□□□□□ -0.77
HMGB3P5-201ENST00000428894 VRTNQ9H8Y1 702 aa10.24□□□□□ -0.77
HMGB3P5-201ENST00000428894 NDFIP2Q9NV92 336 aa10.24□□□□□ -0.77
HMGB3P5-201ENST00000428894 PCDHGC4Q9Y5F7 938 aa10.24□□□□□ -0.77
HMGB3P5-201ENST00000428894 GJA3Q9Y6H8 435 aa10.23□□□□□ -0.77
HMGB3P5-201ENST00000428894 SERTM1A2A2V5 107 aa10.22□□□□□ -0.77
HMGB3P5-201ENST00000428894 ATXN7O15265 892 aaPredicted RBP10.22□□□□□ -0.77
HMGB3P5-201ENST00000428894 BCRP11274 1271 aa10.22□□□□□ -0.77
HMGB3P5-201ENST00000428894 FGFR3P22607 806 aa10.22□□□□□ -0.77
HMGB3P5-201ENST00000428894 SEC13P55735 322 aa10.22□□□□□ -0.77
HMGB3P5-201ENST00000428894 CRTC2Q53ET0 693 aaPredicted RBP10.22□□□□□ -0.77
HMGB3P5-201ENST00000428894 ENAMQ9NRM1 1142 aa10.22□□□□□ -0.77
HMGB3P5-201ENST00000428894 MARSP56192 900 aaKnown RBP10.21□□□□□ -0.77
HMGB3P5-201ENST00000428894 CTBSQ01459 385 aa10.21□□□□□ -0.77
HMGB3P5-201ENST00000428894 PTK7Q13308 1070 aa10.21□□□□□ -0.77
HMGB3P5-201ENST00000428894 SH3PXD2AQ5TCZ1 1133 aa10.21□□□□□ -0.77
HMGB3P5-201ENST00000428894 KLRG1Q96E93 195 aa10.21□□□□□ -0.77
HMGB3P5-201ENST00000428894 EML1O00423 815 aa10.2□□□□□ -0.78
HMGB3P5-201ENST00000428894 BMP4P12644 408 aa10.2□□□□□ -0.78
HMGB3P5-201ENST00000428894 PSMA6P60900 246 aaKnown RBP10.2□□□□□ -0.78
HMGB3P5-201ENST00000428894 DPYDQ12882 1025 aa10.2□□□□□ -0.78
HMGB3P5-201ENST00000428894 OXCT2Q9BYC2 517 aaPredicted RBP10.2□□□□□ -0.78
HMGB3P5-201ENST00000428894 ZMYND15Q9H091 742 aa10.2□□□□□ -0.78
HMGB3P5-201ENST00000428894 CHMP3Q9Y3E7 222 aa10.2□□□□□ -0.78
HMGB3P5-201ENST00000428894 USP17L15C9J2P7 530 aa10.19□□□□□ -0.78
HMGB3P5-201ENST00000428894 USP17L10C9JJH3 530 aa10.19□□□□□ -0.78
HMGB3P5-201ENST00000428894 USP17L13C9JLJ4 530 aa10.19□□□□□ -0.78
HMGB3P5-201ENST00000428894 USP17L12C9JPN9 530 aa10.19□□□□□ -0.78
HMGB3P5-201ENST00000428894 USP17L11C9JVI0 530 aa10.19□□□□□ -0.78
HMGB3P5-201ENST00000428894 USP17L21D6R901 530 aa10.19□□□□□ -0.78
HMGB3P5-201ENST00000428894 USP17L18D6R9N7 530 aa10.19□□□□□ -0.78
HMGB3P5-201ENST00000428894 USP17L22D6RA61 530 aa10.19□□□□□ -0.78
HMGB3P5-201ENST00000428894 USP17L17D6RBQ6 530 aa10.19□□□□□ -0.78
HMGB3P5-201ENST00000428894 USP17L19D6RCP7 530 aa10.19□□□□□ -0.78
HMGB3P5-201ENST00000428894 USP17L20D6RJB6 530 aa10.19□□□□□ -0.78
HMGB3P5-201ENST00000428894 C2CD2LO14523 706 aa10.19□□□□□ -0.78
HMGB3P5-201ENST00000428894 USP17L24Q0WX57 530 aa10.19□□□□□ -0.78
HMGB3P5-201ENST00000428894 CFAP70Q5T0N1 1121 aa10.19□□□□□ -0.78
HMGB3P5-201ENST00000428894 HCN4Q9Y3Q4 1203 aa10.19□□□□□ -0.78
HMGB3P5-201ENST00000428894 GTF3C3Q9Y5Q9 886 aa10.19□□□□□ -0.78
HMGB3P5-201ENST00000428894 ATAD2Q6PL18 1390 aa10.18□□□□□ -0.78
HMGB3P5-201ENST00000428894 DCDC2BA2VCK2 349 aa10.18□□□□□ -0.78
HMGB3P5-201ENST00000428894 FAM196BA6NMK8 535 aa10.18□□□□□ -0.78
HMGB3P5-201ENST00000428894 KHNYNO15037 678 aaKnown RBP10.18□□□□□ -0.78
HMGB3P5-201ENST00000428894 PPP1R12BO60237 982 aaPredicted RBP10.18□□□□□ -0.78
HMGB3P5-201ENST00000428894 MAPTP10636 758 aaKnown RBP10.18□□□□□ -0.78
HMGB3P5-201ENST00000428894 TNP2Q05952 138 aa10.18□□□□□ -0.78
HMGB3P5-201ENST00000428894 KCNMA1Q12791 1236 aa10.18□□□□□ -0.78
HMGB3P5-201ENST00000428894 ANKMY2Q8IV38 441 aa10.18□□□□□ -0.78
HMGB3P5-201ENST00000428894 NEDD1Q8NHV4 660 aa10.18□□□□□ -0.78
HMGB3P5-201ENST00000428894 HINFPQ9BQA5 517 aa10.18□□□□□ -0.78
HMGB3P5-201ENST00000428894 NEUROD4Q9HD90 331 aa10.18□□□□□ -0.78
HMGB3P5-201ENST00000428894 RFX1P22670 979 aa10.17□□□□□ -0.78
HMGB3P5-201ENST00000428894 CDCA8Q53HL2 280 aa10.17□□□□□ -0.78
HMGB3P5-201ENST00000428894 LRRC69Q6ZNQ3 347 aa10.17□□□□□ -0.78
HMGB3P5-201ENST00000428894 SCG3Q8WXD2 468 aaKnown RBP10.17□□□□□ -0.78
HMGB3P5-201ENST00000428894 OIP5O43482 229 aa10.16□□□□□ -0.78
HMGB3P5-201ENST00000428894 C21orf2O43822 256 aa10.16□□□□□ -0.78
HMGB3P5-201ENST00000428894 LGR5O75473 907 aa10.16□□□□□ -0.78
HMGB3P5-201ENST00000428894 RHPN1Q8TCX5 695 aa10.16□□□□□ -0.78
HMGB3P5-201ENST00000428894 C7orf43Q8WVR3 580 aa10.16□□□□□ -0.78
HMGB3P5-201ENST00000428894 RNF225M0QZC1 329 aaPredicted RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms