RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 SULT6B1Q6IMI4 303 aa17.18■□□□□ 0.34
SGCE-203ENST00000425444 SRP68Q9UHB9 627 aaKnown RBP17.18■□□□□ 0.34
SGCE-203ENST00000425444 NPC1L1Q9UHC9 1359 aa17.17■□□□□ 0.34
SGCE-203ENST00000425444 IL13P35225 146 aa17.17■□□□□ 0.34
SGCE-203ENST00000425444 PLEKHO1Q53GL0 409 aaPredicted RBP17.17■□□□□ 0.34
SGCE-203ENST00000425444 AEBP1Q8IUX7 1158 aa17.17■□□□□ 0.34
SGCE-203ENST00000425444 MYH14Q7Z406 1995 aaKnown RBP17.17■□□□□ 0.34
SGCE-203ENST00000425444 POTECB2RU33 542 aa17.16■□□□□ 0.34
SGCE-203ENST00000425444 AMOTQ4VCS5 1084 aa17.16■□□□□ 0.34
SGCE-203ENST00000425444 CHADLQ6NUI6 762 aa17.15■□□□□ 0.34
SGCE-203ENST00000425444 DPY19L2Q6NUT2 758 aa17.15■□□□□ 0.34
SGCE-203ENST00000425444 ZNF530Q6P9A1 599 aaPredicted RBP17.15■□□□□ 0.34
SGCE-203ENST00000425444 ABHD8Q96I13 439 aa17.15■□□□□ 0.34
SGCE-203ENST00000425444 CCDC88AQ3V6T2 1871 aa17.15■□□□□ 0.34
SGCE-203ENST00000425444 COL5A3P25940 1745 aaPredicted RBP17.14■□□□□ 0.33
SGCE-203ENST00000425444 HSP90AB1P08238 724 aaKnown RBP17.14■□□□□ 0.33
SGCE-203ENST00000425444 LBX1P52954 281 aa17.14■□□□□ 0.33
SGCE-203ENST00000425444 C1orf141Q5JVX7 400 aa17.14■□□□□ 0.33
SGCE-203ENST00000425444 CNTNAP1P78357 1384 aa17.14■□□□□ 0.33
SGCE-203ENST00000425444 TIAM2Q8IVF5 1701 aa17.13■□□□□ 0.33
SGCE-203ENST00000425444 POLRMTO00411 1230 aaKnown RBP17.13■□□□□ 0.33
SGCE-203ENST00000425444 DIAPH1O60610 1272 aaKnown RBP17.13■□□□□ 0.33
SGCE-203ENST00000425444 USP42Q9H9J4 1324 aaKnown RBP17.13■□□□□ 0.33
SGCE-203ENST00000425444 MLLT1Q03111 559 aaPredicted RBP17.12■□□□□ 0.33
SGCE-203ENST00000425444 ZNF831Q5JPB2 1677 aa17.12■□□□□ 0.33
SGCE-203ENST00000425444 HMOX1P09601 288 aa17.11■□□□□ 0.33
SGCE-203ENST00000425444 CRKLP46109 303 aaKnown RBP17.11■□□□□ 0.33
SGCE-203ENST00000425444 PDE4DIPQ5VU43 2346 aa17.11■□□□□ 0.33
SGCE-203ENST00000425444 ERVV-2B6SEH9 535 aa17.1■□□□□ 0.33
SGCE-203ENST00000425444 POTEIP0CG38 1075 aa17.1■□□□□ 0.33
SGCE-203ENST00000425444 POTEJP0CG39 1038 aa17.1■□□□□ 0.33
SGCE-203ENST00000425444 VEGFBP49765 207 aa17.1■□□□□ 0.33
SGCE-203ENST00000425444 TTLL6Q8N841 843 aa17.1■□□□□ 0.33
SGCE-203ENST00000425444 NFKBIEO00221 500 aa17.09■□□□□ 0.33
SGCE-203ENST00000425444 U2SURPO15042 1029 aaKnown RBP17.09■□□□□ 0.33
SGCE-203ENST00000425444 PTCD1O75127 700 aaKnown RBP17.09■□□□□ 0.33
SGCE-203ENST00000425444 TM4SF1P30408 202 aa17.09■□□□□ 0.33
SGCE-203ENST00000425444 WBP1LQ9NX94 342 aa17.09■□□□□ 0.33
SGCE-203ENST00000425444 COL3A1P02461 1466 aaPredicted RBP17.08■□□□□ 0.32
SGCE-203ENST00000425444 ZPR1O75312 459 aa17.08■□□□□ 0.32
SGCE-203ENST00000425444 CABP4P57796 275 aa17.08■□□□□ 0.32
SGCE-203ENST00000425444 CFAP53Q96M91 514 aa17.08■□□□□ 0.32
SGCE-203ENST00000425444 TNRC18O15417 2968 aaPredicted RBP17.08■□□□□ 0.32
SGCE-203ENST00000425444 CCDC85CA6NKD9 419 aa17.07■□□□□ 0.32
SGCE-203ENST00000425444 ERFEQ4G0M1 354 aa17.07■□□□□ 0.32
SGCE-203ENST00000425444 AKAP4Q5JQC9 854 aa17.06■□□□□ 0.32
SGCE-203ENST00000425444 C2CD5Q86YS7 1000 aa17.06■□□□□ 0.32
SGCE-203ENST00000425444 TMEM88BA6NKF7 163 aa17.05■□□□□ 0.32
SGCE-203ENST00000425444 HSPA8P11142 646 aaKnown RBP17.05■□□□□ 0.32
SGCE-203ENST00000425444 USPL1Q5W0Q7 1092 aa17.05■□□□□ 0.32
SGCE-203ENST00000425444 PASKQ96RG2 1323 aa17.04■□□□□ 0.32
SGCE-203ENST00000425444 H0YIN7 160 aa17.04■□□□□ 0.32
SGCE-203ENST00000425444 AFDNP55196 1824 aaKnown RBP17.04■□□□□ 0.32
SGCE-203ENST00000425444 DDNO94850 711 aaPredicted RBP17.03■□□□□ 0.32
SGCE-203ENST00000425444 PPP2R1AP30153 589 aa17.03■□□□□ 0.32
SGCE-203ENST00000425444 NFIXQ14938 502 aa17.03■□□□□ 0.32
SGCE-203ENST00000425444 ZNF219Q9P2Y4 722 aaPredicted RBP17.03■□□□□ 0.32
SGCE-203ENST00000425444 DLEC1Q9Y238 1755 aa17.02■□□□□ 0.32
SGCE-203ENST00000425444 DICER1Q9UPY3 1922 aaKnown RBP17.02■□□□□ 0.32
SGCE-203ENST00000425444 RGS19P49795 217 aa17.02■□□□□ 0.32
SGCE-203ENST00000425444 MTHFSDQ2M296 383 aaKnown RBP17.02■□□□□ 0.32
SGCE-203ENST00000425444 INTS5Q6P9B9 1019 aaKnown RBP17.02■□□□□ 0.32
SGCE-203ENST00000425444 LDHDQ86WU2 507 aa17.02■□□□□ 0.32
SGCE-203ENST00000425444 VIRMAQ69YN4 1812 aaKnown RBP17.02■□□□□ 0.31
SGCE-203ENST00000425444 SERPINB2P05120 415 aa17.01■□□□□ 0.31
SGCE-203ENST00000425444 NFATC2IPQ8NCF5 419 aa17.01■□□□□ 0.31
SGCE-203ENST00000425444 NUDCQ9Y266 331 aa17.01■□□□□ 0.31
SGCE-203ENST00000425444 IQCA1LA6NCM1 817 aa17■□□□□ 0.31
SGCE-203ENST00000425444 C21orf2O43822 256 aa17■□□□□ 0.31
SGCE-203ENST00000425444 MAP2K1Q02750 393 aaPredicted RBP17■□□□□ 0.31
SGCE-203ENST00000425444 ZNF622Q969S3 477 aaKnown RBP eCLIP17■□□□□ 0.31
SGCE-203ENST00000425444 SCN11AQ9UI33 1791 aa17■□□□□ 0.31
SGCE-203ENST00000425444 ADAMTS7Q9UKP4 1686 aa16.98■□□□□ 0.31
SGCE-203ENST00000425444 RNMTO43148 476 aaKnown RBP16.98■□□□□ 0.31
SGCE-203ENST00000425444 DEFB115Q30KQ5 88 aa16.98■□□□□ 0.31
SGCE-203ENST00000425444 EAPPQ56P03 285 aaPredicted RBP16.98■□□□□ 0.31
SGCE-203ENST00000425444 GAS2L2Q8NHY3 880 aa16.98■□□□□ 0.31
SGCE-203ENST00000425444 CFAP44Q96MT7 982 aa16.98■□□□□ 0.31
SGCE-203ENST00000425444 TAOK3Q9H2K8 898 aa16.98■□□□□ 0.31
SGCE-203ENST00000425444 SLC52A2Q9HAB3 445 aa16.98■□□□□ 0.31
SGCE-203ENST00000425444 LGR6Q9HBX8 967 aa16.98■□□□□ 0.31
SGCE-203ENST00000425444 NRXN2Q9P2S2 1712 aa16.98■□□□□ 0.31
SGCE-203ENST00000425444 MRC1P22897 1456 aa16.98■□□□□ 0.31
SGCE-203ENST00000425444 SOS1Q07889 1333 aaPredicted RBP16.97■□□□□ 0.31
SGCE-203ENST00000425444 TJP1Q07157 1748 aa16.97■□□□□ 0.31
SGCE-203ENST00000425444 RASSF10A6NK89 507 aa16.97■□□□□ 0.31
SGCE-203ENST00000425444 ITGBL1O95965 494 aaPredicted RBP16.97■□□□□ 0.31
SGCE-203ENST00000425444 U2AF1L5P0DN76 240 aaPredicted RBP16.97■□□□□ 0.31
SGCE-203ENST00000425444 U2AF1Q01081 240 aaKnown RBP eCLIP16.97■□□□□ 0.31
SGCE-203ENST00000425444 TAF1DQ9H5J8 278 aaPredicted RBP16.97■□□□□ 0.31
SGCE-203ENST00000425444 NARFQ9UHQ1 456 aa16.97■□□□□ 0.31
SGCE-203ENST00000425444 CLEC11AQ9Y240 323 aa16.97■□□□□ 0.31
SGCE-203ENST00000425444 CARMIL3Q8ND23 1372 aa16.97■□□□□ 0.31
SGCE-203ENST00000425444 FER1L6Q2WGJ9 1857 aa16.97■□□□□ 0.31
SGCE-203ENST00000425444 WDR33Q9C0J8 1336 aaKnown RBP16.96■□□□□ 0.31
SGCE-203ENST00000425444 PRKAR2BP31323 418 aa16.96■□□□□ 0.31
SGCE-203ENST00000425444 DNAJC10Q8IXB1 793 aa16.96■□□□□ 0.31
SGCE-203ENST00000425444 BEGAINQ9BUH8 593 aa16.95■□□□□ 0.3
SGCE-203ENST00000425444 RSPH6AQ9H0K4 717 aa16.95■□□□□ 0.3
SGCE-203ENST00000425444 LTBP3Q9NS15 1303 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms