RNA–Protein interactions for RNA: ENST00000424643.3

SDCBPP2-201, Transcript of syndecan binding protein pseudogene 2, humanhuman

BASIC

Gene SDCBPP2, Length 885 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP2-201ENST00000424643 GMCL1Q96IK5 515 aa7.09□□□□□ -1.27
SDCBPP2-201ENST00000424643 NUCKS1Q9H1E3 243 aaKnown RBP7.09□□□□□ -1.27
SDCBPP2-201ENST00000424643 RUBCNLQ9H714 662 aa7.09□□□□□ -1.27
SDCBPP2-201ENST00000424643 ADAMTS8Q9UP79 889 aa7.09□□□□□ -1.27
SDCBPP2-201ENST00000424643 A0A1B0GTH6 734 aa7.08□□□□□ -1.28
SDCBPP2-201ENST00000424643 THBS1P07996 1170 aa7.08□□□□□ -1.28
SDCBPP2-201ENST00000424643 SLURP2P0DP57 97 aa7.08□□□□□ -1.28
SDCBPP2-201ENST00000424643 MSX1P28360 303 aa7.08□□□□□ -1.28
SDCBPP2-201ENST00000424643 PLA2G4AP47712 749 aa7.08□□□□□ -1.28
SDCBPP2-201ENST00000424643 ZNF385CQ66K41 422 aaPredicted RBP7.08□□□□□ -1.28
SDCBPP2-201ENST00000424643 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.08□□□□□ -1.28
SDCBPP2-201ENST00000424643 AIDAQ96BJ3 306 aa7.08□□□□□ -1.28
SDCBPP2-201ENST00000424643 USP3Q9Y6I4 520 aa7.08□□□□□ -1.28
SDCBPP2-201ENST00000424643 LZTS3O60299 673 aaPredicted RBP7.07□□□□□ -1.28
SDCBPP2-201ENST00000424643 MFAP1P55081 439 aaKnown RBP7.07□□□□□ -1.28
SDCBPP2-201ENST00000424643 PLEKHM2Q8IWE5 1019 aa7.07□□□□□ -1.28
SDCBPP2-201ENST00000424643 SVOPQ8N4V2 548 aa7.07□□□□□ -1.28
SDCBPP2-201ENST00000424643 TRERF1Q96PN7 1200 aa7.07□□□□□ -1.28
SDCBPP2-201ENST00000424643 SLC4A9Q96Q91 983 aa7.07□□□□□ -1.28
SDCBPP2-201ENST00000424643 ZMIZ1Q9ULJ6 1067 aa7.07□□□□□ -1.28
SDCBPP2-201ENST00000424643 DCAF1Q9Y4B6 1507 aa7.06□□□□□ -1.28
SDCBPP2-201ENST00000424643 A6NJY4 79 aa7.06□□□□□ -1.28
SDCBPP2-201ENST00000424643 RNF225M0QZC1 329 aaPredicted RBP7.06□□□□□ -1.28
SDCBPP2-201ENST00000424643 SRSF11Q05519 484 aaKnown RBP7.06□□□□□ -1.28
SDCBPP2-201ENST00000424643 ELOAQ14241 798 aaKnown RBP7.06□□□□□ -1.28
SDCBPP2-201ENST00000424643 LYPD4Q6UWN0 246 aa7.06□□□□□ -1.28
SDCBPP2-201ENST00000424643 STK32AQ8WU08 396 aa7.06□□□□□ -1.28
SDCBPP2-201ENST00000424643 NIFKQ9BYG3 293 aaKnown RBP7.06□□□□□ -1.28
SDCBPP2-201ENST00000424643 MKRN1Q9UHC7 482 aaKnown RBP7.06□□□□□ -1.28
SDCBPP2-201ENST00000424643 NOVA2Q9UNW9 492 aaKnown RBP7.06□□□□□ -1.28
SDCBPP2-201ENST00000424643 IVNS1ABPQ9Y6Y0 642 aa7.06□□□□□ -1.28
SDCBPP2-201ENST00000424643 CDK2AP1O14519 115 aa7.05□□□□□ -1.28
SDCBPP2-201ENST00000424643 TMEM164Q5U3C3 297 aa7.05□□□□□ -1.28
SDCBPP2-201ENST00000424643 PGBD3Q8N328 593 aa7.05□□□□□ -1.28
SDCBPP2-201ENST00000424643 MBIPQ9NS73 344 aa7.05□□□□□ -1.28
SDCBPP2-201ENST00000424643 ZNF358Q9NW07 568 aa7.05□□□□□ -1.28
SDCBPP2-201ENST00000424643 KIAA1024Q9UPX6 916 aa7.05□□□□□ -1.28
SDCBPP2-201ENST00000424643 PARP3Q9Y6F1 533 aa7.05□□□□□ -1.28
SDCBPP2-201ENST00000424643 FAM196BA6NMK8 535 aa7.04□□□□□ -1.28
SDCBPP2-201ENST00000424643 USP17L15C9J2P7 530 aa7.04□□□□□ -1.28
SDCBPP2-201ENST00000424643 USP17L10C9JJH3 530 aa7.04□□□□□ -1.28
SDCBPP2-201ENST00000424643 USP17L13C9JLJ4 530 aa7.04□□□□□ -1.28
SDCBPP2-201ENST00000424643 USP17L12C9JPN9 530 aa7.04□□□□□ -1.28
SDCBPP2-201ENST00000424643 USP17L11C9JVI0 530 aa7.04□□□□□ -1.28
SDCBPP2-201ENST00000424643 USP17L21D6R901 530 aa7.04□□□□□ -1.28
SDCBPP2-201ENST00000424643 USP17L18D6R9N7 530 aa7.04□□□□□ -1.28
SDCBPP2-201ENST00000424643 USP17L22D6RA61 530 aa7.04□□□□□ -1.28
SDCBPP2-201ENST00000424643 USP17L17D6RBQ6 530 aa7.04□□□□□ -1.28
SDCBPP2-201ENST00000424643 USP17L19D6RCP7 530 aa7.04□□□□□ -1.28
SDCBPP2-201ENST00000424643 USP17L20D6RJB6 530 aa7.04□□□□□ -1.28
SDCBPP2-201ENST00000424643 ZBTB7BO15156 539 aaPredicted RBP7.04□□□□□ -1.28
SDCBPP2-201ENST00000424643 CLDN10P78369 228 aa7.04□□□□□ -1.28
SDCBPP2-201ENST00000424643 USP17L24Q0WX57 530 aa7.04□□□□□ -1.28
SDCBPP2-201ENST00000424643 MTFR1Q15390 333 aa7.04□□□□□ -1.28
SDCBPP2-201ENST00000424643 CRTC2Q53ET0 693 aaPredicted RBP7.04□□□□□ -1.28
SDCBPP2-201ENST00000424643 TPCN2Q8NHX9 752 aa7.04□□□□□ -1.28
SDCBPP2-201ENST00000424643 CABP1Q9NZU7 370 aa7.04□□□□□ -1.28
SDCBPP2-201ENST00000424643 IQSEC3Q9UPP2 1182 aaPredicted RBP7.04□□□□□ -1.28
SDCBPP2-201ENST00000424643 IGF1RP08069 1367 aa7.04□□□□□ -1.28
SDCBPP2-201ENST00000424643 BACH1O14867 736 aa7.03□□□□□ -1.28
SDCBPP2-201ENST00000424643 MX2P20592 715 aa7.03□□□□□ -1.28
SDCBPP2-201ENST00000424643 UBAP2LQ14157 1087 aaKnown RBP7.03□□□□□ -1.28
SDCBPP2-201ENST00000424643 TBCELQ5QJ74 424 aa7.03□□□□□ -1.28
SDCBPP2-201ENST00000424643 LARP1Q6PKG0 1096 aaKnown RBP7.03□□□□□ -1.28
SDCBPP2-201ENST00000424643 TRIM50Q86XT4 487 aa7.03□□□□□ -1.28
SDCBPP2-201ENST00000424643 TNS4Q8IZW8 715 aa7.03□□□□□ -1.28
SDCBPP2-201ENST00000424643 ZNF295-AS1Q8N0V1 137 aa7.03□□□□□ -1.28
SDCBPP2-201ENST00000424643 RGS22Q8NE09 1264 aa7.03□□□□□ -1.28
SDCBPP2-201ENST00000424643 ARHGEF15O94989 841 aa7.02□□□□□ -1.29
SDCBPP2-201ENST00000424643 CELA2BP08218 269 aaPredicted RBP7.02□□□□□ -1.29
SDCBPP2-201ENST00000424643 ATP4AP20648 1035 aa7.02□□□□□ -1.29
SDCBPP2-201ENST00000424643 RASA1P20936 1047 aa7.02□□□□□ -1.29
SDCBPP2-201ENST00000424643 EFHC2Q5JST6 749 aa7.02□□□□□ -1.29
SDCBPP2-201ENST00000424643 CCDC102BQ68D86 513 aa7.02□□□□□ -1.29
SDCBPP2-201ENST00000424643 B4GALNT3Q6L9W6 998 aa7.02□□□□□ -1.29
SDCBPP2-201ENST00000424643 OGFOD1Q8N543 542 aa7.02□□□□□ -1.29
SDCBPP2-201ENST00000424643 SCHIP1Q9P0W5 487 aaPredicted RBP7.02□□□□□ -1.29
SDCBPP2-201ENST00000424643 MTMR7Q9Y216 660 aa7.02□□□□□ -1.29
SDCBPP2-201ENST00000424643 PTK7Q13308 1070 aa7.01□□□□□ -1.29
SDCBPP2-201ENST00000424643 ARSJQ5FYB0 599 aaPredicted RBP7.01□□□□□ -1.29
SDCBPP2-201ENST00000424643 ACDQ96AP0 544 aa7.01□□□□□ -1.29
SDCBPP2-201ENST00000424643 ZNF594Q96JF6 807 aaPredicted RBP7.01□□□□□ -1.29
SDCBPP2-201ENST00000424643 CFHR5Q9BXR6 569 aa7.01□□□□□ -1.29
SDCBPP2-201ENST00000424643 CRISPLD1Q9H336 500 aa7.01□□□□□ -1.29
SDCBPP2-201ENST00000424643 DNAAF2Q9NVR5 837 aaKnown RBP7.01□□□□□ -1.29
SDCBPP2-201ENST00000424643 MYO15BQ96JP2 1530 aa7.01□□□□□ -1.29
SDCBPP2-201ENST00000424643 BNIP3LO60238 219 aa7□□□□□ -1.29
SDCBPP2-201ENST00000424643 ATP1A2P50993 1020 aa7□□□□□ -1.29
SDCBPP2-201ENST00000424643 EPHA4P54764 986 aa7□□□□□ -1.29
SDCBPP2-201ENST00000424643 MAP3K10Q02779 954 aa7□□□□□ -1.29
SDCBPP2-201ENST00000424643 LBRQ14739 615 aaKnown RBP7□□□□□ -1.29
SDCBPP2-201ENST00000424643 GPAT2Q6NUI2 795 aa7□□□□□ -1.29
SDCBPP2-201ENST00000424643 SLC9A9Q8IVB4 645 aa7□□□□□ -1.29
SDCBPP2-201ENST00000424643 FAM200AQ8TCP9 573 aa7□□□□□ -1.29
SDCBPP2-201ENST00000424643 ZDHHC1Q8WTX9 485 aa7□□□□□ -1.29
SDCBPP2-201ENST00000424643 ABHD17AQ96GS6 310 aa7□□□□□ -1.29
SDCBPP2-201ENST00000424643 PHF24Q9UPV7 400 aa7□□□□□ -1.29
SDCBPP2-201ENST00000424643 A0A1W2PNR3 127 aa6.99□□□□□ -1.29
SDCBPP2-201ENST00000424643 TXLNAP40222 546 aa6.99□□□□□ -1.29
SDCBPP2-201ENST00000424643 FOXK2Q01167 660 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms