RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 NECAB1Q8N987 351 aa13.99□□□□□ -0.17
UBR4-205ENST00000417040 STX1AQ16623 288 aa13.99□□□□□ -0.17
UBR4-205ENST00000417040 C9orf84Q5VXU9 1444 aa13.99□□□□□ -0.17
UBR4-205ENST00000417040 RBM5P52756 815 aaKnown RBP eCLIP13.98□□□□□ -0.17
UBR4-205ENST00000417040 AQRO60306 1485 aaKnown RBP eCLIP13.98□□□□□ -0.174e-7■■■■□ 25.4
UBR4-205ENST00000417040 FCHSD2O94868 740 aa13.98□□□□□ -0.17
UBR4-205ENST00000417040 CLCN1P35523 988 aa13.98□□□□□ -0.17
UBR4-205ENST00000417040 CCDC12Q8WUD4 166 aaPredicted RBP13.98□□□□□ -0.17
UBR4-205ENST00000417040 UBA5Q9GZZ9 404 aa13.98□□□□□ -0.17
UBR4-205ENST00000417040 TTC12Q9H892 705 aaPredicted RBP13.98□□□□□ -0.17
UBR4-205ENST00000417040 ANO6Q4KMQ2 910 aa13.98□□□□□ -0.17
UBR4-205ENST00000417040 TIGD1Q96MW7 591 aa13.98□□□□□ -0.17
UBR4-205ENST00000417040 SLC26A8Q96RN1 970 aa13.98□□□□□ -0.17
UBR4-205ENST00000417040 MYD88Q99836 296 aa13.98□□□□□ -0.17
UBR4-205ENST00000417040 USP48Q86UV5 1035 aa13.98□□□□□ -0.17
UBR4-205ENST00000417040 STAC3Q96MF2 364 aa13.98□□□□□ -0.17
UBR4-205ENST00000417040 ERICH3Q5RHP9 1530 aa13.98□□□□□ -0.17
UBR4-205ENST00000417040 BBXQ8WY36 941 aaPredicted RBP13.98□□□□□ -0.17
UBR4-205ENST00000417040 WASF1Q92558 559 aa13.98□□□□□ -0.17
UBR4-205ENST00000417040 ZNF76P36508 570 aa13.97□□□□□ -0.17
UBR4-205ENST00000417040 BICDL1Q6ZP65 573 aa13.97□□□□□ -0.17
UBR4-205ENST00000417040 MAATS1Q7Z4T9 603 aa13.97□□□□□ -0.17
UBR4-205ENST00000417040 KLHL40Q2TBA0 621 aa13.97□□□□□ -0.17
UBR4-205ENST00000417040 CTNNBL1Q8WYA6 563 aaPredicted RBP13.97□□□□□ -0.17
UBR4-205ENST00000417040 BMP2KQ9NSY1 1161 aaPredicted RBP13.97□□□□□ -0.17
UBR4-205ENST00000417040 ZNF165P49910 485 aa13.97□□□□□ -0.17
UBR4-205ENST00000417040 CEP126Q9P2H0 1117 aa13.97□□□□□ -0.17
UBR4-205ENST00000417040 ABCF2Q9UG63 623 aa13.97□□□□□ -0.17
UBR4-205ENST00000417040 GTF2A1P52655 376 aaPredicted RBP13.97□□□□□ -0.17
UBR4-205ENST00000417040 GNG11P61952 73 aa13.97□□□□□ -0.17
UBR4-205ENST00000417040 HLTFQ14527 1009 aaKnown RBP eCLIP13.97□□□□□ -0.176e-7■□□□□ 10.6
UBR4-205ENST00000417040 RSPH14Q9UHP6 348 aa13.97□□□□□ -0.17
UBR4-205ENST00000417040 BMS1Q14692 1282 aaKnown RBP13.97□□□□□ -0.17
UBR4-205ENST00000417040 SLC4A8Q2Y0W8 1093 aa13.97□□□□□ -0.17
UBR4-205ENST00000417040 TDRD12Q587J7 1177 aaKnown RBP13.97□□□□□ -0.17
UBR4-205ENST00000417040 FKBP15Q5T1M5 1219 aa13.97□□□□□ -0.17
UBR4-205ENST00000417040 GNAT3A8MTJ3 354 aa13.96□□□□□ -0.17
UBR4-205ENST00000417040 PRIM1P49642 420 aaKnown RBP13.96□□□□□ -0.17
UBR4-205ENST00000417040 SH2B1Q9NRF2 756 aaPredicted RBP13.96□□□□□ -0.17
UBR4-205ENST00000417040 GLRX3O76003 335 aaKnown RBP13.96□□□□□ -0.17
UBR4-205ENST00000417040 HFM1A2PYH4 1435 aa13.96□□□□□ -0.17
UBR4-205ENST00000417040 RTEL1-TNFRSF6BF6WH68 1400 aa13.96□□□□□ -0.17
UBR4-205ENST00000417040 MPHOSPH10O00566 681 aaKnown RBP13.96□□□□□ -0.18
UBR4-205ENST00000417040 GOLGA8BA8MQT2 603 aa13.96□□□□□ -0.18
UBR4-205ENST00000417040 CCDC186Q7Z3E2 898 aa13.96□□□□□ -0.18
UBR4-205ENST00000417040 PLEKHH1Q9ULM0 1364 aa13.96□□□□□ -0.18
UBR4-205ENST00000417040 U3KPZ7 1027 aaPredicted RBP13.95□□□□□ -0.18
UBR4-205ENST00000417040 EZRP15311 586 aaKnown RBP13.95□□□□□ -0.18
UBR4-205ENST00000417040 TAF7Q15545 349 aaPredicted RBP13.95□□□□□ -0.18
UBR4-205ENST00000417040 TMX3Q96JJ7 454 aa13.95□□□□□ -0.18
UBR4-205ENST00000417040 PRIMPOLQ96LW4 560 aa13.95□□□□□ -0.18
UBR4-205ENST00000417040 JADE2Q9NQC1 790 aa13.95□□□□□ -0.18
UBR4-205ENST00000417040 SYNJ1O43426 1573 aa13.95□□□□□ -0.18
UBR4-205ENST00000417040 DAPK1P53355 1430 aa13.95□□□□□ -0.18
UBR4-205ENST00000417040 MNAT1P51948 309 aa13.95□□□□□ -0.18
UBR4-205ENST00000417040 WWC2Q6AWC2 1192 aa13.95□□□□□ -0.18
UBR4-205ENST00000417040 KRT222Q8N1A0 295 aa13.95□□□□□ -0.18
UBR4-205ENST00000417040 UBE2HP62256 183 aa13.95□□□□□ -0.18
UBR4-205ENST00000417040 METTL24Q5JXM2 366 aa13.95□□□□□ -0.18
UBR4-205ENST00000417040 DDX19AQ9NUU7 478 aaKnown RBP13.95□□□□□ -0.18
UBR4-205ENST00000417040 TIAM1Q13009 1591 aa13.95□□□□□ -0.18
UBR4-205ENST00000417040 YEATS4O95619 227 aa13.94□□□□□ -0.18
UBR4-205ENST00000417040 C8orf34Q49A92 452 aa13.94□□□□□ -0.18
UBR4-205ENST00000417040 PAXBP1Q9Y5B6 917 aa13.94□□□□□ -0.18
UBR4-205ENST00000417040 IFIT1P09914 478 aaKnown RBP13.94□□□□□ -0.18
UBR4-205ENST00000417040 MCM5P33992 734 aa13.94□□□□□ -0.18
UBR4-205ENST00000417040 HAND2P61296 217 aa13.94□□□□□ -0.18
UBR4-205ENST00000417040 SSRP1Q08945 709 aaKnown RBP13.94□□□□□ -0.18
UBR4-205ENST00000417040 TTC22Q5TAA0 569 aa13.94□□□□□ -0.18
UBR4-205ENST00000417040 GSDMDP57764 484 aa13.94□□□□□ -0.18
UBR4-205ENST00000417040 KRI1Q8N9T8 703 aaKnown RBP13.94□□□□□ -0.18
UBR4-205ENST00000417040 JARID2Q92833 1246 aaPredicted RBP13.94□□□□□ -0.18
UBR4-205ENST00000417040 LRRC2Q9BYS8 371 aa13.94□□□□□ -0.18
UBR4-205ENST00000417040 SERPINA10Q9UK55 444 aa13.94□□□□□ -0.18
UBR4-205ENST00000417040 PRG4Q92954 1404 aaPredicted RBP13.94□□□□□ -0.18
UBR4-205ENST00000417040 CTAGE5O15320 804 aa13.94□□□□□ -0.18
UBR4-205ENST00000417040 PRPF4BQ13523 1007 aaKnown RBP13.94□□□□□ -0.18
UBR4-205ENST00000417040 MCM6Q14566 821 aa13.94□□□□□ -0.18
UBR4-205ENST00000417040 ALDH1L2Q3SY69 923 aa13.94□□□□□ -0.18
UBR4-205ENST00000417040 MICALCLQ6ZW33 695 aa13.94□□□□□ -0.18
UBR4-205ENST00000417040 TCEANC2Q96MN5 208 aa13.94□□□□□ -0.18
UBR4-205ENST00000417040 DNAI1Q9UI46 699 aa13.94□□□□□ -0.18
UBR4-205ENST00000417040 EHBP1L1Q8N3D4 1523 aa13.93□□□□□ -0.18
UBR4-205ENST00000417040 TMCO5BA8MYB1 307 aa13.93□□□□□ -0.18
UBR4-205ENST00000417040 MCM3P25205 808 aa13.93□□□□□ -0.18
UBR4-205ENST00000417040 FAM69CQ0P6D2 419 aa13.93□□□□□ -0.18
UBR4-205ENST00000417040 SPECC1Q5M775 1068 aa13.93□□□□□ -0.18
UBR4-205ENST00000417040 TOM1L2Q6ZVM7 507 aa13.93□□□□□ -0.18
UBR4-205ENST00000417040 MACROD2A1Z1Q3 448 aa13.93□□□□□ -0.18
UBR4-205ENST00000417040 ZSCAN29Q8IWY8 852 aaPredicted RBP13.93□□□□□ -0.18
UBR4-205ENST00000417040 GSTTP1A0A1W2PQM5 241 aa13.93□□□□□ -0.18
UBR4-205ENST00000417040 C16orf71Q8IYS4 520 aaPredicted RBP13.93□□□□□ -0.18
UBR4-205ENST00000417040 DRC1Q96MC2 740 aa13.93□□□□□ -0.18
UBR4-205ENST00000417040 SLC12A7Q9Y666 1083 aa13.93□□□□□ -0.18
UBR4-205ENST00000417040 PAFAH1B1P43034 410 aa13.92□□□□□ -0.18
UBR4-205ENST00000417040 TNNQ9UQP3 1299 aa13.92□□□□□ -0.18
UBR4-205ENST00000417040 SKILP12757 684 aa13.92□□□□□ -0.18
UBR4-205ENST00000417040 TERF1P54274 439 aa13.92□□□□□ -0.18
UBR4-205ENST00000417040 SPTY2D1Q68D10 685 aaPredicted RBP13.92□□□□□ -0.18
UBR4-205ENST00000417040 DNAJC25Q9H1X3 360 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms