RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 CAPN5O15484 640 aaPredicted RBP8.79□□□□□ -1
LSM5-206ENST00000409987 TEAD4Q15561 434 aa8.79□□□□□ -1
LSM5-206ENST00000409987 NOM1Q5C9Z4 860 aaKnown RBP8.79□□□□□ -1
LSM5-206ENST00000409987 C16orf46Q6P387 395 aa8.79□□□□□ -1
LSM5-206ENST00000409987 DNAJC14Q6Y2X3 702 aaPredicted RBP8.79□□□□□ -1
LSM5-206ENST00000409987 ZSCAN10Q96SZ4 725 aaPredicted RBP8.79□□□□□ -1
LSM5-206ENST00000409987 INSM2Q96T92 566 aaPredicted RBP8.79□□□□□ -1
LSM5-206ENST00000409987 TSEN34Q9BSV6 310 aaKnown RBP8.79□□□□□ -1
LSM5-206ENST00000409987 QTRT2Q9H974 415 aaKnown RBP8.79□□□□□ -1
LSM5-206ENST00000409987 SERTM1A2A2V5 107 aa8.78□□□□□ -1
LSM5-206ENST00000409987 SPINT1O43278 529 aa8.78□□□□□ -1
LSM5-206ENST00000409987 NOS2P35228 1153 aa8.78□□□□□ -1
LSM5-206ENST00000409987 HIRAP54198 1017 aaPredicted RBP8.78□□□□□ -1
LSM5-206ENST00000409987 MARSP56192 900 aaKnown RBP8.78□□□□□ -1
LSM5-206ENST00000409987 LINC00528Q8N1L1 170 aa8.78□□□□□ -1
LSM5-206ENST00000409987 GRIP2Q9C0E4 1043 aa8.78□□□□□ -1
LSM5-206ENST00000409987 CABP1Q9NZU7 370 aa8.78□□□□□ -1
LSM5-206ENST00000409987 PDZRN3Q9UPQ7 1066 aa8.78□□□□□ -1
LSM5-206ENST00000409987 PARP3Q9Y6F1 533 aa8.78□□□□□ -1
LSM5-206ENST00000409987 TNFRSF10BO14763 440 aa8.77□□□□□ -1.01
LSM5-206ENST00000409987 NPR3P17342 541 aa8.77□□□□□ -1.01
LSM5-206ENST00000409987 GPC1P35052 558 aa8.77□□□□□ -1.01
LSM5-206ENST00000409987 ARHGAP4P98171 946 aa8.77□□□□□ -1.01
LSM5-206ENST00000409987 COX20Q5RI15 118 aa8.77□□□□□ -1.01
LSM5-206ENST00000409987 L3MBTL2Q969R5 705 aa8.77□□□□□ -1.01
LSM5-206ENST00000409987 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.77□□□□□ -1.01
LSM5-206ENST00000409987 CHMP3Q9Y3E7 222 aa8.77□□□□□ -1.01
LSM5-206ENST00000409987 MPSTP25325 297 aa8.76□□□□□ -1.01
LSM5-206ENST00000409987 CTSOP43234 321 aaPredicted RBP8.76□□□□□ -1.01
LSM5-206ENST00000409987 RNF144AP50876 292 aaPredicted RBP8.76□□□□□ -1.01
LSM5-206ENST00000409987 TMEM214Q6NUQ4 689 aaKnown RBP8.76□□□□□ -1.01
LSM5-206ENST00000409987 RHBDD1Q8TEB9 315 aa8.76□□□□□ -1.01
LSM5-206ENST00000409987 MYO19Q96H55 970 aa8.76□□□□□ -1.01
LSM5-206ENST00000409987 NGLY1Q96IV0 654 aa8.76□□□□□ -1.01
LSM5-206ENST00000409987 NIFKQ9BYG3 293 aaKnown RBP8.76□□□□□ -1.01
LSM5-206ENST00000409987 LRFN2Q9ULH4 789 aa8.76□□□□□ -1.01
LSM5-206ENST00000409987 ZNF232Q9UNY5 417 aa8.76□□□□□ -1.01
LSM5-206ENST00000409987 SLC27A3Q5K4L6 730 aa8.75□□□□□ -1.01
LSM5-206ENST00000409987 POLMQ9NP87 494 aaPredicted RBP8.75□□□□□ -1.01
LSM5-206ENST00000409987 HCN4Q9Y3Q4 1203 aa8.75□□□□□ -1.01
LSM5-206ENST00000409987 FAM187AA6NFU0 413 aa8.74□□□□□ -1.01
LSM5-206ENST00000409987 C4orf17Q53FE4 359 aa8.74□□□□□ -1.01
LSM5-206ENST00000409987 ALDH16A1Q8IZ83 802 aa8.74□□□□□ -1.01
LSM5-206ENST00000409987 ZNF428Q96B54 188 aa8.74□□□□□ -1.01
LSM5-206ENST00000409987 FAM13AO94988 1023 aa8.73□□□□□ -1.01
LSM5-206ENST00000409987 UPP2O95045 317 aa8.73□□□□□ -1.01
LSM5-206ENST00000409987 AVPP01185 164 aa8.73□□□□□ -1.01
LSM5-206ENST00000409987 FAM26DQ5JW98 314 aa8.73□□□□□ -1.01
LSM5-206ENST00000409987 GNASQ5JWF2 1037 aa8.73□□□□□ -1.01
LSM5-206ENST00000409987 PHACTR1Q9C0D0 580 aa8.73□□□□□ -1.01
LSM5-206ENST00000409987 STIM2Q9P246 746 aa8.73□□□□□ -1.01
LSM5-206ENST00000409987 BMP2P12643 396 aa8.72□□□□□ -1.01
LSM5-206ENST00000409987 GTF2E1P29083 439 aaPredicted RBP8.72□□□□□ -1.01
LSM5-206ENST00000409987 TXLNAP40222 546 aa8.72□□□□□ -1.01
LSM5-206ENST00000409987 PLA2G4AP47712 749 aa8.72□□□□□ -1.01
LSM5-206ENST00000409987 RTN1Q16799 776 aa8.72□□□□□ -1.01
LSM5-206ENST00000409987 C6orf118Q5T5N4 469 aa8.72□□□□□ -1.01
LSM5-206ENST00000409987 MRPL14Q6P1L8 145 aaKnown RBP8.72□□□□□ -1.01
LSM5-206ENST00000409987 DCTN4Q9UJW0 460 aa8.72□□□□□ -1.01
LSM5-206ENST00000409987 AMOTL2Q9Y2J4 779 aa8.72□□□□□ -1.01
LSM5-206ENST00000409987 SPATA31C2B4DYI2 1134 aa8.71□□□□□ -1.02
LSM5-206ENST00000409987 MAPK1P28482 360 aa8.71□□□□□ -1.02
LSM5-206ENST00000409987 EIF1AXP47813 144 aaKnown RBP8.71□□□□□ -1.02
LSM5-206ENST00000409987 RNF217Q8TC41 542 aa8.71□□□□□ -1.02
LSM5-206ENST00000409987 ANKRD33BA6NCL7 494 aa8.7□□□□□ -1.02
LSM5-206ENST00000409987 BMP1P13497 986 aa8.7□□□□□ -1.02
LSM5-206ENST00000409987 ERCC3P19447 782 aa8.7□□□□□ -1.02
LSM5-206ENST00000409987 C1orf53Q5VUE5 145 aa8.7□□□□□ -1.02
LSM5-206ENST00000409987 KLK14Q9P0G3 267 aa8.7□□□□□ -1.02
LSM5-206ENST00000409987 ZBTB39O15060 712 aa8.69□□□□□ -1.02
LSM5-206ENST00000409987 PHKA2P46019 1235 aa8.69□□□□□ -1.02
LSM5-206ENST00000409987 RBM25P49756 843 aaKnown RBP8.69□□□□□ -1.02
LSM5-206ENST00000409987 POU4F2Q12837 409 aa8.69□□□□□ -1.02
LSM5-206ENST00000409987 DGKZQ13574 1117 aa8.69□□□□□ -1.02
LSM5-206ENST00000409987 C11orf91Q3C1V1 193 aa8.69□□□□□ -1.02
LSM5-206ENST00000409987 TRIM46Q7Z4K8 759 aa8.69□□□□□ -1.02
LSM5-206ENST00000409987 NPAS4Q8IUM7 802 aa8.69□□□□□ -1.02
LSM5-206ENST00000409987 ETFBKMTQ8IXQ9 262 aa8.69□□□□□ -1.02
LSM5-206ENST00000409987 FZD6O60353 706 aa8.68□□□□□ -1.02
LSM5-206ENST00000409987 BRD2P25440 801 aaKnown RBP8.68□□□□□ -1.02
LSM5-206ENST00000409987 NBPF10Q6P3W6 841 aaKnown RBP8.68□□□□□ -1.02
LSM5-206ENST00000409987 PRICKLE2Q7Z3G6 844 aa8.68□□□□□ -1.02
LSM5-206ENST00000409987 ABTB2Q8N961 1025 aa8.68□□□□□ -1.02
LSM5-206ENST00000409987 C7orf43Q8WVR3 580 aa8.68□□□□□ -1.02
LSM5-206ENST00000409987 KLRG1Q96E93 195 aa8.68□□□□□ -1.02
LSM5-206ENST00000409987 ASB16Q96NS5 453 aa8.68□□□□□ -1.02
LSM5-206ENST00000409987 CCDC87Q9NVE4 849 aa8.68□□□□□ -1.02
LSM5-206ENST00000409987 SMCPP49901 116 aaPredicted RBP8.67□□□□□ -1.02
LSM5-206ENST00000409987 LYSMD3Q7Z3D4 306 aa8.67□□□□□ -1.02
LSM5-206ENST00000409987 ATCAYQ86WG3 371 aa8.67□□□□□ -1.02
LSM5-206ENST00000409987 AIDAQ96BJ3 306 aa8.67□□□□□ -1.02
LSM5-206ENST00000409987 SOS2Q07890 1332 aaPredicted RBP8.66□□□□□ -1.02
LSM5-206ENST00000409987 TTLL8A6PVC2 850 aa8.66□□□□□ -1.02
LSM5-206ENST00000409987 DGAT1O75907 488 aa8.66□□□□□ -1.02
LSM5-206ENST00000409987 ALKBH2Q6NS38 261 aa8.66□□□□□ -1.02
LSM5-206ENST00000409987 IFT43Q96FT9 208 aa8.66□□□□□ -1.02
LSM5-206ENST00000409987 RBCK1Q9BYM8 510 aa8.66□□□□□ -1.02
LSM5-206ENST00000409987 ZDHHC3Q9NYG2 299 aa8.66□□□□□ -1.02
LSM5-206ENST00000409987 BCS1LQ9Y276 419 aa8.66□□□□□ -1.02
LSM5-206ENST00000409987 RBM47A0AV96 593 aaKnown RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms