RNA–Protein interactions for RNA: ENST00000404970.3

VAMP2-202, Transcript of vesicle associated membrane protein 2, humanhuman

TSL 2 BASIC

Gene VAMP2, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-202ENST00000404970 SPON1Q9HCB6 807 aa18.45■□□□□ 0.54
VAMP2-202ENST00000404970 SOS1Q07889 1333 aaPredicted RBP18.44■□□□□ 0.54
VAMP2-202ENST00000404970 MSH5O43196 834 aa18.44■□□□□ 0.54
VAMP2-202ENST00000404970 USP16Q9Y5T5 823 aa18.44■□□□□ 0.54
VAMP2-202ENST00000404970 SCN7AQ01118 1682 aa18.44■□□□□ 0.54
VAMP2-202ENST00000404970 ARHGEF1Q92888 912 aaKnown RBP18.43■□□□□ 0.54
VAMP2-202ENST00000404970 RTCBQ9Y3I0 505 aaKnown RBP18.43■□□□□ 0.54
VAMP2-202ENST00000404970 BCORQ6W2J9 1755 aa18.43■□□□□ 0.54
VAMP2-202ENST00000404970 CHL1O00533 1208 aa18.42■□□□□ 0.54
VAMP2-202ENST00000404970 PIP4K2AP48426 406 aaPredicted RBP18.42■□□□□ 0.54
VAMP2-202ENST00000404970 SLC16A10Q8TF71 515 aa18.42■□□□□ 0.54
VAMP2-202ENST00000404970 TSPYL4Q9UJ04 414 aa18.42■□□□□ 0.54
VAMP2-202ENST00000404970 CCER2I3L3R5 266 aa18.41■□□□□ 0.54
VAMP2-202ENST00000404970 A1BGP04217 495 aa18.41■□□□□ 0.54
VAMP2-202ENST00000404970 KRT24Q2M2I5 525 aa18.41■□□□□ 0.54
VAMP2-202ENST00000404970 FLAD1Q8NFF5 587 aa18.41■□□□□ 0.54
VAMP2-202ENST00000404970 COL15A1P39059 1388 aa18.41■□□□□ 0.54
VAMP2-202ENST00000404970 ZNF853P0CG23 659 aa18.4■□□□□ 0.54
VAMP2-202ENST00000404970 SRP68Q9UHB9 627 aaKnown RBP18.4■□□□□ 0.54
VAMP2-202ENST00000404970 GIGYF1O75420 1035 aaPredicted RBP18.39■□□□□ 0.54
VAMP2-202ENST00000404970 SNRPA1P09661 255 aaKnown RBP18.39■□□□□ 0.54
VAMP2-202ENST00000404970 HMGB2P26583 209 aaKnown RBP18.39■□□□□ 0.54
VAMP2-202ENST00000404970 CANXP27824 592 aaKnown RBP18.39■□□□□ 0.54
VAMP2-202ENST00000404970 LAS1LQ9Y4W2 734 aaKnown RBP18.39■□□□□ 0.54
VAMP2-202ENST00000404970 NBPF26B4DH59 902 aa18.39■□□□□ 0.53
VAMP2-202ENST00000404970 ADRA2BP18089 450 aa18.39■□□□□ 0.53
VAMP2-202ENST00000404970 TRAPPC3LQ5T215 181 aa18.39■□□□□ 0.53
VAMP2-202ENST00000404970 NBPF10Q6P3W6 841 aaKnown RBP18.39■□□□□ 0.53
VAMP2-202ENST00000404970 WWC1Q8IX03 1113 aa18.39■□□□□ 0.53
VAMP2-202ENST00000404970 NBPF15Q8N660 670 aa18.39■□□□□ 0.53
VAMP2-202ENST00000404970 BABAM1Q9NWV8 329 aa18.39■□□□□ 0.53
VAMP2-202ENST00000404970 STARD3NLO95772 234 aa18.38■□□□□ 0.53
VAMP2-202ENST00000404970 EIF5P55010 431 aaKnown RBP18.38■□□□□ 0.53
VAMP2-202ENST00000404970 CCDC27Q2M243 656 aa18.38■□□□□ 0.53
VAMP2-202ENST00000404970 TEX13AQ9BXU3 409 aaPredicted RBP18.38■□□□□ 0.53
VAMP2-202ENST00000404970 MBIPQ9NS73 344 aa18.38■□□□□ 0.53
VAMP2-202ENST00000404970 SALL2Q9Y467 1007 aaPredicted RBP18.38■□□□□ 0.53
VAMP2-202ENST00000404970 USP42Q9H9J4 1324 aaKnown RBP18.37■□□□□ 0.53
VAMP2-202ENST00000404970 GYS1P13807 737 aa18.37■□□□□ 0.53
VAMP2-202ENST00000404970 CFAP44Q96MT7 982 aa18.37■□□□□ 0.53
VAMP2-202ENST00000404970 BCL2L12Q9HB09 334 aa18.35■□□□□ 0.53
VAMP2-202ENST00000404970 IFT57Q9NWB7 429 aa18.35■□□□□ 0.53
VAMP2-202ENST00000404970 AFDNP55196 1824 aaKnown RBP18.35■□□□□ 0.53
VAMP2-202ENST00000404970 KIAA1551Q9HCM1 1747 aa18.34■□□□□ 0.53
VAMP2-202ENST00000404970 RFC4P35249 363 aa18.34■□□□□ 0.53
VAMP2-202ENST00000404970 KIF13BQ9NQT8 1826 aa18.33■□□□□ 0.53
VAMP2-202ENST00000404970 FKBP8Q14318 412 aa18.33■□□□□ 0.53
VAMP2-202ENST00000404970 NCBP3Q53F19 620 aaKnown RBP18.33■□□□□ 0.53
VAMP2-202ENST00000404970 USPL1Q5W0Q7 1092 aa18.33■□□□□ 0.53
VAMP2-202ENST00000404970 ARXQ96QS3 562 aa18.33■□□□□ 0.53
VAMP2-202ENST00000404970 IL6STP40189 918 aaPredicted RBP18.33■□□□□ 0.52
VAMP2-202ENST00000404970 TSR2Q969E8 191 aaKnown RBP18.33■□□□□ 0.52
VAMP2-202ENST00000404970 SPINK5Q9NQ38 1064 aaPredicted RBP18.33■□□□□ 0.52
VAMP2-202ENST00000404970 ZNF330Q9Y3S2 320 aaPredicted RBP18.33■□□□□ 0.52
VAMP2-202ENST00000404970 NRXN2Q9P2S2 1712 aa18.32■□□□□ 0.52
VAMP2-202ENST00000404970 NARFQ9UHQ1 456 aa18.32■□□□□ 0.52
VAMP2-202ENST00000404970 ZNF521Q96K83 1311 aa18.32■□□□□ 0.52
VAMP2-202ENST00000404970 NUP98P52948 1817 aa18.31■□□□□ 0.52
VAMP2-202ENST00000404970 MMP10P09238 476 aa18.31■□□□□ 0.52
VAMP2-202ENST00000404970 GNAI1P63096 354 aa18.31■□□□□ 0.52
VAMP2-202ENST00000404970 PDIA6Q15084 440 aa18.31■□□□□ 0.52
VAMP2-202ENST00000404970 PROSER3Q2NL68 480 aa18.31■□□□□ 0.52
VAMP2-202ENST00000404970 LRP10Q7Z4F1 713 aa18.31■□□□□ 0.52
VAMP2-202ENST00000404970 FHDC1Q9C0D6 1143 aaPredicted RBP18.31■□□□□ 0.52
VAMP2-202ENST00000404970 PPP1R1BQ9UD71 204 aaPredicted RBP18.31■□□□□ 0.52
VAMP2-202ENST00000404970 TBC1D2BQ9UPU7 963 aa18.31■□□□□ 0.52
VAMP2-202ENST00000404970 POLD1P28340 1107 aa18.3■□□□□ 0.52
VAMP2-202ENST00000404970 DDR1Q08345 913 aa18.3■□□□□ 0.52
VAMP2-202ENST00000404970 NECTIN2Q92692 538 aa18.3■□□□□ 0.52
VAMP2-202ENST00000404970 IL16Q14005 1332 aa18.29■□□□□ 0.52
VAMP2-202ENST00000404970 CAMTA2O94983 1202 aa18.29■□□□□ 0.52
VAMP2-202ENST00000404970 ANXA1P04083 346 aa18.29■□□□□ 0.52
VAMP2-202ENST00000404970 CALD1Q05682 793 aaKnown RBP18.29■□□□□ 0.52
VAMP2-202ENST00000404970 C8orf58Q8NAV2 365 aa18.29■□□□□ 0.52
VAMP2-202ENST00000404970 EIF2S2P20042 333 aaKnown RBP18.28■□□□□ 0.52
VAMP2-202ENST00000404970 TSPYL6Q8N831 410 aa18.28■□□□□ 0.52
VAMP2-202ENST00000404970 FANCIQ9NVI1 1328 aa18.27■□□□□ 0.52
VAMP2-202ENST00000404970 ZPR1O75312 459 aa18.27■□□□□ 0.52
VAMP2-202ENST00000404970 DUSP27Q5VZP5 1158 aa18.27■□□□□ 0.52
VAMP2-202ENST00000404970 NLGN1Q8N2Q7 840 aa18.27■□□□□ 0.52
VAMP2-202ENST00000404970 N4BP2Q86UW6 1770 aaPredicted RBP18.27■□□□□ 0.52
VAMP2-202ENST00000404970 MYL6BP14649 208 aa18.26■□□□□ 0.51
VAMP2-202ENST00000404970 TM4SF1P30408 202 aa18.26■□□□□ 0.51
VAMP2-202ENST00000404970 TTLL7Q6ZT98 887 aa18.26■□□□□ 0.51
VAMP2-202ENST00000404970 DZIP3Q86Y13 1208 aaKnown RBP18.26■□□□□ 0.51
VAMP2-202ENST00000404970 WDR63Q8IWG1 891 aa18.26■□□□□ 0.51
VAMP2-202ENST00000404970 NLGN2Q8NFZ4 835 aa18.26■□□□□ 0.51
VAMP2-202ENST00000404970 SYT17Q9BSW7 474 aa18.26■□□□□ 0.51
VAMP2-202ENST00000404970 ANKRD31Q8N7Z5 1873 aa18.26■□□□□ 0.51
VAMP2-202ENST00000404970 C10orf71Q711Q0 1435 aa18.26■□□□□ 0.51
VAMP2-202ENST00000404970 A0A087WZG4 1122 aa18.26■□□□□ 0.51
VAMP2-202ENST00000404970 ELL2O00472 640 aaPredicted RBP18.26■□□□□ 0.51
VAMP2-202ENST00000404970 NFIXQ14938 502 aa18.26■□□□□ 0.51
VAMP2-202ENST00000404970 NGEFQ8N5V2 710 aa18.26■□□□□ 0.51
VAMP2-202ENST00000404970 ANKRD36CQ5JPF3 1778 aa18.25■□□□□ 0.51
VAMP2-202ENST00000404970 ERBB4Q15303 1308 aa18.25■□□□□ 0.51
VAMP2-202ENST00000404970 POLRMTO00411 1230 aaKnown RBP18.25■□□□□ 0.51
VAMP2-202ENST00000404970 TBC1D9BQ66K14 1250 aa18.25■□□□□ 0.51
VAMP2-202ENST00000404970 BRCA1P38398 1863 aaKnown RBP18.24■□□□□ 0.51
VAMP2-202ENST00000404970 HOXB7P09629 217 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms