RNA–Protein interactions for RNA: ENST00000404249.7

CDK11A-208, Transcript of cyclin dependent kinase 11A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CDK11A, Length 2,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-208ENST00000404249 HOXB7P09629 217 aa21.63■■□□□ 1.05
CDK11A-208ENST00000404249 INTS4Q96HW7 963 aaKnown RBP21.62■■□□□ 1.05
CDK11A-208ENST00000404249 EPB41L2O43491 1005 aaKnown RBP21.61■■□□□ 1.05
CDK11A-208ENST00000404249 BRD1O95696 1058 aa21.61■■□□□ 1.05
CDK11A-208ENST00000404249 FOXD4L5Q5VV16 416 aaPredicted RBP21.61■■□□□ 1.05
CDK11A-208ENST00000404249 NOL8Q76FK4 1167 aaKnown RBP21.61■■□□□ 1.05
CDK11A-208ENST00000404249 RHPN1Q8TCX5 695 aa21.61■■□□□ 1.05
CDK11A-208ENST00000404249 FOXD4L4Q8WXT5 416 aaPredicted RBP21.61■■□□□ 1.05
CDK11A-208ENST00000404249 CHAMP1Q96JM3 812 aa21.61■■□□□ 1.05
CDK11A-208ENST00000404249 NAP1L5Q96NT1 182 aaPredicted RBP21.61■■□□□ 1.05
CDK11A-208ENST00000404249 IL25Q9H293 177 aa21.61■■□□□ 1.05
CDK11A-208ENST00000404249 PHRF1Q9P1Y6 1649 aaKnown RBP21.61■■□□□ 1.05
CDK11A-208ENST00000404249 NBPF6Q5VWK0 638 aa21.61■■□□□ 1.05
CDK11A-208ENST00000404249 NBPF4Q96M43 638 aa21.61■■□□□ 1.05
CDK11A-208ENST00000404249 CHPF2Q9P2E5 772 aa21.61■■□□□ 1.05
CDK11A-208ENST00000404249 RBM27Q9P2N5 1060 aaKnown RBP21.61■■□□□ 1.05
CDK11A-208ENST00000404249 LGR6Q9HBX8 967 aa21.6■■□□□ 1.05
CDK11A-208ENST00000404249 CRYBG1Q9Y4K1 1723 aa21.6■■□□□ 1.05
CDK11A-208ENST00000404249 SRGAP3O43295 1099 aa21.6■■□□□ 1.05
CDK11A-208ENST00000404249 PI4K2BQ8TCG2 481 aa21.6■■□□□ 1.05
CDK11A-208ENST00000404249 DNAAF4Q8WXU2 420 aa21.59■■□□□ 1.05
CDK11A-208ENST00000404249 UPF3BQ9BZI7 483 aaKnown RBP21.59■■□□□ 1.05
CDK11A-208ENST00000404249 NBPF7P0C2Y1 421 aaPredicted RBP21.59■■□□□ 1.05
CDK11A-208ENST00000404249 BEND3Q5T5X7 828 aa21.59■■□□□ 1.05
CDK11A-208ENST00000404249 KIF1BPQ96EK5 621 aa21.59■■□□□ 1.05
CDK11A-208ENST00000404249 HSPA4P34932 840 aa21.58■■□□□ 1.05
CDK11A-208ENST00000404249 MAP4K4O95819 1239 aaPredicted RBP21.58■■□□□ 1.04
CDK11A-208ENST00000404249 CHMP4AQ9BY43 222 aa21.58■■□□□ 1.04
CDK11A-208ENST00000404249 RBSNQ9H1K0 784 aa21.58■■□□□ 1.04
CDK11A-208ENST00000404249 PI4KAP2A4QPH2 592 aa21.57■■□□□ 1.04
CDK11A-208ENST00000404249 PI4KAP1Q8N8J0 262 aa21.57■■□□□ 1.04
CDK11A-208ENST00000404249 TMEM63CQ9P1W3 806 aa21.57■■□□□ 1.04
CDK11A-208ENST00000404249 KCNQ3O43525 872 aa21.57■■□□□ 1.04
CDK11A-208ENST00000404249 PRIM1P49642 420 aaKnown RBP21.57■■□□□ 1.04
CDK11A-208ENST00000404249 RAD50Q92878 1312 aa21.56■■□□□ 1.04
CDK11A-208ENST00000404249 MBD3O95983 291 aa21.56■■□□□ 1.04
CDK11A-208ENST00000404249 ADCY9O60503 1353 aa21.56■■□□□ 1.04
CDK11A-208ENST00000404249 TEFQ10587 303 aa21.56■■□□□ 1.04
CDK11A-208ENST00000404249 NSFL1CQ9UNZ2 370 aaKnown RBP21.56■■□□□ 1.04
CDK11A-208ENST00000404249 ADGRL3Q9HAR2 1447 aa21.56■■□□□ 1.04
CDK11A-208ENST00000404249 ZBTB7CA1YPR0 619 aa21.55■■□□□ 1.04
CDK11A-208ENST00000404249 SGSM2O43147 1006 aa21.55■■□□□ 1.04
CDK11A-208ENST00000404249 AKAP4Q5JQC9 854 aa21.55■■□□□ 1.04
CDK11A-208ENST00000404249 ZNF530Q6P9A1 599 aaPredicted RBP21.55■■□□□ 1.04
CDK11A-208ENST00000404249 CNTROBQ8N137 903 aa21.55■■□□□ 1.04
CDK11A-208ENST00000404249 BTBD11A6QL63 1104 aa21.54■■□□□ 1.04
CDK11A-208ENST00000404249 HSP90AB4PQ58FF6 505 aa21.54■■□□□ 1.04
CDK11A-208ENST00000404249 LRSAM1Q6UWE0 723 aa21.54■■□□□ 1.04
CDK11A-208ENST00000404249 KCNH5Q8NCM2 988 aa21.54■■□□□ 1.04
CDK11A-208ENST00000404249 ANXA1P04083 346 aa21.54■■□□□ 1.04
CDK11A-208ENST00000404249 ZSCAN30Q86W11 494 aa21.53■■□□□ 1.04
CDK11A-208ENST00000404249 LRRC59Q96AG4 307 aaKnown RBP21.53■■□□□ 1.04
CDK11A-208ENST00000404249 PXDNQ92626 1479 aa21.53■■□□□ 1.04
CDK11A-208ENST00000404249 USP42Q9H9J4 1324 aaKnown RBP21.52■■□□□ 1.04
CDK11A-208ENST00000404249 NCAPD2Q15021 1401 aa21.52■■□□□ 1.04
CDK11A-208ENST00000404249 SYCE3A1L190 88 aa21.52■■□□□ 1.04
CDK11A-208ENST00000404249 PLEKHO1Q53GL0 409 aaPredicted RBP21.52■■□□□ 1.04
CDK11A-208ENST00000404249 PSME1Q06323 249 aa21.51■■□□□ 1.03
CDK11A-208ENST00000404249 MPRIPQ6WCQ1 1025 aa21.51■■□□□ 1.03
CDK11A-208ENST00000404249 LSG1Q9H089 658 aaKnown RBP21.51■■□□□ 1.03
CDK11A-208ENST00000404249 RBM33Q96EV2 1170 aaKnown RBP21.51■■□□□ 1.03
CDK11A-208ENST00000404249 SNX14Q9Y5W7 946 aa21.51■■□□□ 1.03
CDK11A-208ENST00000404249 TTC41PQ6P2S7 1318 aa21.5■■□□□ 1.03
CDK11A-208ENST00000404249 PLEKHG5O94827 1062 aa21.5■■□□□ 1.03
CDK11A-208ENST00000404249 OS9Q13438 667 aaPredicted RBP21.5■■□□□ 1.03
CDK11A-208ENST00000404249 MTX1Q13505 466 aa21.5■■□□□ 1.03
CDK11A-208ENST00000404249 ESCO1Q5FWF5 840 aa21.5■■□□□ 1.03
CDK11A-208ENST00000404249 PDLIM2Q96JY6 352 aa21.5■■□□□ 1.03
CDK11A-208ENST00000404249 DBF4Q9UBU7 674 aaPredicted RBP21.5■■□□□ 1.03
CDK11A-208ENST00000404249 OVOS2A0A0G2JMS6 1433 aa21.5■■□□□ 1.03
CDK11A-208ENST00000404249 WDR33Q9C0J8 1336 aaKnown RBP21.49■■□□□ 1.03
CDK11A-208ENST00000404249 RNMTO43148 476 aaKnown RBP21.49■■□□□ 1.03
CDK11A-208ENST00000404249 AMOTQ4VCS5 1084 aa21.49■■□□□ 1.03
CDK11A-208ENST00000404249 SIPA1L3O60292 1781 aaPredicted RBP21.49■■□□□ 1.03
CDK11A-208ENST00000404249 CAMTA1Q9Y6Y1 1673 aa21.48■■□□□ 1.03
CDK11A-208ENST00000404249 GLRX3O76003 335 aaKnown RBP21.48■■□□□ 1.03
CDK11A-208ENST00000404249 TTC14Q96N46 770 aa21.48■■□□□ 1.03
CDK11A-208ENST00000404249 RPAP1Q9BWH6 1393 aaPredicted RBP21.48■■□□□ 1.03
CDK11A-208ENST00000404249 SLIT3O75094 1523 aa21.48■■□□□ 1.03
CDK11A-208ENST00000404249 HS1BP3Q53T59 392 aa21.48■■□□□ 1.03
CDK11A-208ENST00000404249 C1orf141Q5JVX7 400 aa21.48■■□□□ 1.03
CDK11A-208ENST00000404249 ZNF142P52746 1687 aaPredicted RBP21.48■■□□□ 1.03
CDK11A-208ENST00000404249 ALDH1L1O75891 902 aa21.47■■□□□ 1.03
CDK11A-208ENST00000404249 CWC27Q6UX04 472 aaKnown RBP21.47■■□□□ 1.03
CDK11A-208ENST00000404249 KIAA1211Q6ZU35 1233 aa21.47■■□□□ 1.03
CDK11A-208ENST00000404249 MAP3K2Q9Y2U5 619 aa21.47■■□□□ 1.03
CDK11A-208ENST00000404249 TCHHQ07283 1943 aa21.47■■□□□ 1.03
CDK11A-208ENST00000404249 MSNP26038 577 aaKnown RBP21.47■■□□□ 1.03
CDK11A-208ENST00000404249 ANKLE2Q86XL3 938 aa21.46■■□□□ 1.03
CDK11A-208ENST00000404249 RASEFQ8IZ41 740 aa21.46■■□□□ 1.03
CDK11A-208ENST00000404249 CLASRPQ8N2M8 674 aaKnown RBP21.46■■□□□ 1.03
CDK11A-208ENST00000404249 SYAP1Q96A49 352 aaPredicted RBP21.46■■□□□ 1.03
CDK11A-208ENST00000404249 AK2P54819 239 aa21.45■■□□□ 1.02
CDK11A-208ENST00000404249 PROSER3Q2NL68 480 aa21.45■■□□□ 1.02
CDK11A-208ENST00000404249 DIAPH3Q9NSV4 1193 aa21.45■■□□□ 1.02
CDK11A-208ENST00000404249 C9orf78Q9NZ63 289 aaPredicted RBP21.45■■□□□ 1.02
CDK11A-208ENST00000404249 SPG7Q9UQ90 795 aa21.45■■□□□ 1.02
CDK11A-208ENST00000404249 HEG1Q9ULI3 1381 aa21.45■■□□□ 1.02
CDK11A-208ENST00000404249 GIGYF1O75420 1035 aaPredicted RBP21.45■■□□□ 1.02
CDK11A-208ENST00000404249 FOXD4L6Q3SYB3 417 aaPredicted RBP21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms