RNA–Protein interactions for RNA: ENST00000395715.7

TRPS1-203, Transcript of transcriptional repressor GATA binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPS1, Length 9,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-203ENST00000395715 CCDC171Q6TFL3 1326 aa9.22□□□□□ -0.93
TRPS1-203ENST00000395715 CEP85LQ5SZL2 805 aa9.22□□□□□ -0.93
TRPS1-203ENST00000395715 YEATS4O95619 227 aa9.22□□□□□ -0.93
TRPS1-203ENST00000395715 CEP131Q9UPN4 1083 aa9.22□□□□□ -0.93
TRPS1-203ENST00000395715 FGFR1OPO95684 399 aaKnown RBP9.22□□□□□ -0.93
TRPS1-203ENST00000395715 AIMP1Q12904 312 aaKnown RBP9.22□□□□□ -0.93
TRPS1-203ENST00000395715 TRIM35Q9UPQ4 493 aa9.22□□□□□ -0.93
TRPS1-203ENST00000395715 VGLL3A8MV65 326 aa9.21□□□□□ -0.93
TRPS1-203ENST00000395715 CCDC50Q8IVM0 306 aa9.21□□□□□ -0.93
TRPS1-203ENST00000395715 GSDMBQ8TAX9 411 aa9.21□□□□□ -0.93
TRPS1-203ENST00000395715 GSDMDP57764 484 aa9.21□□□□□ -0.93
TRPS1-203ENST00000395715 AAMPQ13685 434 aa9.21□□□□□ -0.93
TRPS1-203ENST00000395715 FERMT2Q96AC1 680 aa9.21□□□□□ -0.93
TRPS1-203ENST00000395715 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.21□□□□□ -0.93
TRPS1-203ENST00000395715 DIAPH1O60610 1272 aaKnown RBP9.21□□□□□ -0.93
TRPS1-203ENST00000395715 CDKL5O76039 1030 aa9.21□□□□□ -0.93
TRPS1-203ENST00000395715 SH3BGRP55822 239 aaPredicted RBP9.21□□□□□ -0.93
TRPS1-203ENST00000395715 ERCC5P28715 1186 aaPredicted RBP9.21□□□□□ -0.93
TRPS1-203ENST00000395715 NEDD9Q14511 834 aa9.21□□□□□ -0.93
TRPS1-203ENST00000395715 CCDC144CPQ8IYA2 1237 aa9.21□□□□□ -0.93
TRPS1-203ENST00000395715 XAB2Q9HCS7 855 aaKnown RBP9.21□□□□□ -0.93
TRPS1-203ENST00000395715 SAMD15Q9P1V8 674 aa9.21□□□□□ -0.93
TRPS1-203ENST00000395715 SH3BP5O60239 455 aa9.21□□□□□ -0.94
TRPS1-203ENST00000395715 TSNAXIP1Q2TAA8 658 aa9.21□□□□□ -0.94
TRPS1-203ENST00000395715 ATP2B2Q01814 1243 aa9.21□□□□□ -0.94
TRPS1-203ENST00000395715 TRAK1Q9UPV9 953 aa9.21□□□□□ -0.94
TRPS1-203ENST00000395715 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.21□□□□□ -0.94
TRPS1-203ENST00000395715 CARMIL2Q6F5E8 1435 aa9.21□□□□□ -0.94
TRPS1-203ENST00000395715 KLHL10Q6JEL2 608 aa9.21□□□□□ -0.94
TRPS1-203ENST00000395715 IFT74Q96LB3 600 aa9.21□□□□□ -0.94
TRPS1-203ENST00000395715 ANO10Q9NW15 660 aa9.21□□□□□ -0.94
TRPS1-203ENST00000395715 COG3Q96JB2 828 aa9.2□□□□□ -0.94
TRPS1-203ENST00000395715 ZBTB12Q9Y330 459 aaPredicted RBP9.2□□□□□ -0.94
TRPS1-203ENST00000395715 PIBF1Q8WXW3 757 aa9.2□□□□□ -0.94
TRPS1-203ENST00000395715 SELENOSQ9BQE4 189 aa9.2□□□□□ -0.94
TRPS1-203ENST00000395715 TRIM7Q9C029 511 aa9.2□□□□□ -0.94
TRPS1-203ENST00000395715 ZEB2O60315 1214 aa9.2□□□□□ -0.94
TRPS1-203ENST00000395715 GCKP35557 465 aa9.2□□□□□ -0.94
TRPS1-203ENST00000395715 CXorf38Q8TB03 319 aa9.2□□□□□ -0.94
TRPS1-203ENST00000395715 NOP2P46087 812 aaKnown RBP9.2□□□□□ -0.94
TRPS1-203ENST00000395715 CCDC129Q6ZRS4 1044 aa9.2□□□□□ -0.94
TRPS1-203ENST00000395715 ATF3P18847 181 aa9.2□□□□□ -0.94
TRPS1-203ENST00000395715 PFDN1O60925 122 aa9.2□□□□□ -0.94
TRPS1-203ENST00000395715 LRRC45Q96CN5 670 aa9.2□□□□□ -0.94
TRPS1-203ENST00000395715 MTUS1Q9ULD2 1270 aa9.2□□□□□ -0.94
TRPS1-203ENST00000395715 FAM160A1Q05DH4 1040 aa9.2□□□□□ -0.94
TRPS1-203ENST00000395715 KRBA2Q6ZNG9 492 aa9.2□□□□□ -0.94
TRPS1-203ENST00000395715 SEC62Q99442 399 aaKnown RBP9.2□□□□□ -0.94
TRPS1-203ENST00000395715 VPS18Q9P253 973 aa9.2□□□□□ -0.94
TRPS1-203ENST00000395715 CFAP157Q5JU67 520 aa9.2□□□□□ -0.94
TRPS1-203ENST00000395715 RGS22Q8NE09 1264 aa9.2□□□□□ -0.94
TRPS1-203ENST00000395715 NBPF11Q86T75 865 aa9.19□□□□□ -0.94
TRPS1-203ENST00000395715 RSPH3Q86UC2 560 aa9.19□□□□□ -0.94
TRPS1-203ENST00000395715 EHBP1Q8NDI1 1231 aa9.19□□□□□ -0.94
TRPS1-203ENST00000395715 MAP2K2P36507 400 aa9.19□□□□□ -0.94
TRPS1-203ENST00000395715 IFI16Q16666 785 aaKnown RBP9.19□□□□□ -0.94
TRPS1-203ENST00000395715 RASAL2Q9UJF2 1139 aa9.19□□□□□ -0.94
TRPS1-203ENST00000395715 COG7P83436 770 aa9.19□□□□□ -0.94
TRPS1-203ENST00000395715 CCDC183Q5T5S1 534 aa9.19□□□□□ -0.94
TRPS1-203ENST00000395715 ZSWIM4Q9H7M6 989 aa9.19□□□□□ -0.94
TRPS1-203ENST00000395715 CCDC12Q8WUD4 166 aaPredicted RBP9.19□□□□□ -0.94
TRPS1-203ENST00000395715 FAM177BA6PVY3 158 aa9.19□□□□□ -0.94
TRPS1-203ENST00000395715 MCM5P33992 734 aa9.19□□□□□ -0.94
TRPS1-203ENST00000395715 PHLDB2Q86SQ0 1253 aa9.19□□□□□ -0.94
TRPS1-203ENST00000395715 FHAD1B1AJZ9 1412 aa9.19□□□□□ -0.94
TRPS1-203ENST00000395715 SMIM24O75264 130 aa9.19□□□□□ -0.94
TRPS1-203ENST00000395715 RNF8O76064 485 aa9.19□□□□□ -0.94
TRPS1-203ENST00000395715 ZNF76P36508 570 aa9.19□□□□□ -0.94
TRPS1-203ENST00000395715 ARHGAP35Q9NRY4 1499 aa9.19□□□□□ -0.94
TRPS1-203ENST00000395715 PLVAPQ9BX97 442 aa9.19□□□□□ -0.94
TRPS1-203ENST00000395715 PRDM2Q13029 1718 aa9.18□□□□□ -0.94
TRPS1-203ENST00000395715 B4GALNT4Q76KP1 1039 aa9.18□□□□□ -0.94
TRPS1-203ENST00000395715 MCM4P33991 863 aa9.18□□□□□ -0.94
TRPS1-203ENST00000395715 EFCAB2Q5VUJ9 269 aa9.18□□□□□ -0.94
TRPS1-203ENST00000395715 TACC3Q9Y6A5 838 aa9.18□□□□□ -0.94
TRPS1-203ENST00000395715 ATICP31939 592 aa9.18□□□□□ -0.94
TRPS1-203ENST00000395715 INPP1P49441 399 aa9.18□□□□□ -0.94
TRPS1-203ENST00000395715 INTS8Q75QN2 995 aaKnown RBP9.18□□□□□ -0.94
TRPS1-203ENST00000395715 RPAINQ86UA6 219 aa9.18□□□□□ -0.94
TRPS1-203ENST00000395715 CCDC77Q9BR77 488 aa9.18□□□□□ -0.94
TRPS1-203ENST00000395715 UBTFL1P0CB47 393 aaPredicted RBP9.18□□□□□ -0.94
TRPS1-203ENST00000395715 ALDH3A1P30838 453 aa9.18□□□□□ -0.94
TRPS1-203ENST00000395715 NUP155O75694 1391 aa9.18□□□□□ -0.94
TRPS1-203ENST00000395715 VPS41P49754 854 aa9.17□□□□□ -0.94
TRPS1-203ENST00000395715 CCDC38Q502W7 563 aa9.17□□□□□ -0.94
TRPS1-203ENST00000395715 WASHC2AQ641Q2 1341 aa9.17□□□□□ -0.94
TRPS1-203ENST00000395715 HNRNPMP52272 730 aaKnown RBP eCLIP9.17□□□□□ -0.94
TRPS1-203ENST00000395715 ERCC6LQ2NKX8 1250 aa9.17□□□□□ -0.94
TRPS1-203ENST00000395715 GBP5Q96PP8 586 aa9.17□□□□□ -0.94
TRPS1-203ENST00000395715 RIC3Q7Z5B4 369 aa9.17□□□□□ -0.94
TRPS1-203ENST00000395715 CCDC94Q9BW85 323 aaPredicted RBP9.17□□□□□ -0.94
TRPS1-203ENST00000395715 RBBP5Q15291 538 aaKnown RBP9.17□□□□□ -0.94
TRPS1-203ENST00000395715 RAB3IPQ96QF0 476 aaPredicted RBP9.17□□□□□ -0.94
TRPS1-203ENST00000395715 SELENOOQ9BVL4 669 aa9.17□□□□□ -0.94
TRPS1-203ENST00000395715 SETD5Q9C0A6 1442 aa9.17□□□□□ -0.94
TRPS1-203ENST00000395715 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.17□□□□□ -0.94
TRPS1-203ENST00000395715 SNX16P57768 344 aa9.17□□□□□ -0.94
TRPS1-203ENST00000395715 VPS52Q8N1B4 723 aa9.17□□□□□ -0.94
TRPS1-203ENST00000395715 CPLX3Q8WVH0 158 aa9.17□□□□□ -0.94
TRPS1-203ENST00000395715 MYCBPQ99417 103 aaPredicted RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms