RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 FAM135BQ49AJ0 1406 aa19.52■□□□□ 0.71
PHTF1-205ENST00000393357 ZFYVE16Q7Z3T8 1539 aa19.51■□□□□ 0.71
PHTF1-205ENST00000393357 NUP62CLQ9H1M0 184 aa19.51■□□□□ 0.71
PHTF1-205ENST00000393357 LIMCH1Q9UPQ0 1083 aa19.51■□□□□ 0.71
PHTF1-205ENST00000393357 UBTFL1P0CB47 393 aaPredicted RBP19.51■□□□□ 0.71
PHTF1-205ENST00000393357 ZFP91Q96JP5 570 aaPredicted RBP19.51■□□□□ 0.71
PHTF1-205ENST00000393357 MROH2AA6NES4 1674 aa19.51■□□□□ 0.71
PHTF1-205ENST00000393357 CDC37L1Q7L3B6 337 aa19.51■□□□□ 0.71
PHTF1-205ENST00000393357 INTS4Q96HW7 963 aaKnown RBP19.51■□□□□ 0.71
PHTF1-205ENST00000393357 RPAP1Q9BWH6 1393 aaPredicted RBP19.5■□□□□ 0.71
PHTF1-205ENST00000393357 TYRO3Q06418 890 aa19.5■□□□□ 0.71
PHTF1-205ENST00000393357 UVSSAQ2YD98 709 aa19.5■□□□□ 0.71
PHTF1-205ENST00000393357 FMNL2Q96PY5 1086 aa19.5■□□□□ 0.71
PHTF1-205ENST00000393357 PDRG1Q9NUG6 133 aa19.5■□□□□ 0.71
PHTF1-205ENST00000393357 ADGRB2O60241 1585 aa19.5■□□□□ 0.71
PHTF1-205ENST00000393357 USP27XA6NNY8 438 aa19.5■□□□□ 0.71
PHTF1-205ENST00000393357 FGD1P98174 961 aa19.5■□□□□ 0.71
PHTF1-205ENST00000393357 PTH1RQ03431 593 aa19.5■□□□□ 0.71
PHTF1-205ENST00000393357 FLIIQ13045 1269 aa19.5■□□□□ 0.71
PHTF1-205ENST00000393357 TTC6Q86TZ1 520 aa19.5■□□□□ 0.71
PHTF1-205ENST00000393357 GTPBP4Q9BZE4 634 aaKnown RBP19.5■□□□□ 0.71
PHTF1-205ENST00000393357 PHAXQ9H814 394 aaKnown RBP19.5■□□□□ 0.71
PHTF1-205ENST00000393357 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.5■□□□□ 0.71
PHTF1-205ENST00000393357 ATP7AQ04656 1500 aa19.5■□□□□ 0.71
PHTF1-205ENST00000393357 PPP1R42Q7Z4L9 355 aa19.49■□□□□ 0.71
PHTF1-205ENST00000393357 C14orf37Q86TY3 774 aa19.49■□□□□ 0.71
PHTF1-205ENST00000393357 MAP3K11Q16584 847 aa19.49■□□□□ 0.71
PHTF1-205ENST00000393357 COL3A1P02461 1466 aaPredicted RBP19.49■□□□□ 0.71
PHTF1-205ENST00000393357 YTHDC2Q9H6S0 1430 aaKnown RBP19.49■□□□□ 0.71
PHTF1-205ENST00000393357 UTP14CQ5TAP6 766 aaKnown RBP19.49■□□□□ 0.71
PHTF1-205ENST00000393357 CLIP2Q9UDT6 1046 aa19.49■□□□□ 0.71
PHTF1-205ENST00000393357 PIK3R4Q99570 1358 aa19.48■□□□□ 0.71
PHTF1-205ENST00000393357 DEPDC5O75140 1603 aa19.48■□□□□ 0.71
PHTF1-205ENST00000393357 CHMP4AQ9BY43 222 aa19.48■□□□□ 0.71
PHTF1-205ENST00000393357 CBX8Q9HC52 389 aa19.48■□□□□ 0.71
PHTF1-205ENST00000393357 USP16Q9Y5T5 823 aa19.47■□□□□ 0.71
PHTF1-205ENST00000393357 LETM1O95202 739 aaPredicted RBP19.47■□□□□ 0.71
PHTF1-205ENST00000393357 LRRC2Q9BYS8 371 aa19.47■□□□□ 0.71
PHTF1-205ENST00000393357 CHL1O00533 1208 aa19.47■□□□□ 0.71
PHTF1-205ENST00000393357 NCBP3Q53F19 620 aaKnown RBP19.47■□□□□ 0.71
PHTF1-205ENST00000393357 MTMR6Q9Y217 621 aa19.47■□□□□ 0.71
PHTF1-205ENST00000393357 ATP6V1DQ9Y5K8 247 aa19.47■□□□□ 0.71
PHTF1-205ENST00000393357 ABCA9Q8IUA7 1624 aa19.46■□□□□ 0.71
PHTF1-205ENST00000393357 HSPA4P34932 840 aa19.46■□□□□ 0.71
PHTF1-205ENST00000393357 CACTINQ8WUQ7 758 aaKnown RBP19.46■□□□□ 0.71
PHTF1-205ENST00000393357 SPTLC3Q9NUV7 552 aa19.46■□□□□ 0.71
PHTF1-205ENST00000393357 PA2G4Q9UQ80 394 aaKnown RBP19.46■□□□□ 0.71
PHTF1-205ENST00000393357 KIF1BO60333 1816 aa19.46■□□□□ 0.71
PHTF1-205ENST00000393357 ZNF165P49910 485 aa19.46■□□□□ 0.71
PHTF1-205ENST00000393357 ME3Q16798 604 aa19.46■□□□□ 0.71
PHTF1-205ENST00000393357 MTHFSDQ2M296 383 aaKnown RBP19.46■□□□□ 0.71
PHTF1-205ENST00000393357 CCDC144BQ3MJ40 725 aa19.46■□□□□ 0.71
PHTF1-205ENST00000393357 CCDC144CPQ8IYA2 1237 aa19.46■□□□□ 0.71
PHTF1-205ENST00000393357 TMX1Q9H3N1 280 aa19.46■□□□□ 0.71
PHTF1-205ENST00000393357 ARHGEF40Q8TER5 1519 aa19.46■□□□□ 0.71
PHTF1-205ENST00000393357 CCT4P50991 539 aaKnown RBP19.46■□□□□ 0.7
PHTF1-205ENST00000393357 GTF3C6Q969F1 213 aa19.46■□□□□ 0.7
PHTF1-205ENST00000393357 NUDT16Q96DE0 195 aaKnown RBP19.46■□□□□ 0.7
PHTF1-205ENST00000393357 SIL1Q9H173 461 aa19.46■□□□□ 0.7
PHTF1-205ENST00000393357 ZNF215Q9UL58 517 aaPredicted RBP19.46■□□□□ 0.7
PHTF1-205ENST00000393357 NPM1P06748 294 aaKnown RBP eCLIP19.45■□□□□ 0.7
PHTF1-205ENST00000393357 PTPN21Q16825 1174 aa19.45■□□□□ 0.7
PHTF1-205ENST00000393357 SPATA32Q96LK8 384 aa19.45■□□□□ 0.7
PHTF1-205ENST00000393357 ELF2Q15723 593 aa19.45■□□□□ 0.7
PHTF1-205ENST00000393357 USHBP1Q8N6Y0 703 aa19.45■□□□□ 0.7
PHTF1-205ENST00000393357 FAM200AQ8TCP9 573 aa19.45■□□□□ 0.7
PHTF1-205ENST00000393357 MRVI1Q9Y6F6 885 aa19.45■□□□□ 0.7
PHTF1-205ENST00000393357 NDUFB9Q9Y6M9 179 aa19.45■□□□□ 0.7
PHTF1-205ENST00000393357 RAB11FIP3O75154 756 aa19.44■□□□□ 0.7
PHTF1-205ENST00000393357 GUCY1B3Q02153 619 aa19.44■□□□□ 0.7
PHTF1-205ENST00000393357 FTOQ9C0B1 505 aaKnown RBP eCLIP19.44■□□□□ 0.7
PHTF1-205ENST00000393357 TET3O43151 1660 aa19.44■□□□□ 0.7
PHTF1-205ENST00000393357 INO80Q9ULG1 1556 aaPredicted RBP19.44■□□□□ 0.7
PHTF1-205ENST00000393357 NR1I2O75469 434 aa19.44■□□□□ 0.7
PHTF1-205ENST00000393357 NBPF7P0C2Y1 421 aaPredicted RBP19.44■□□□□ 0.7
PHTF1-205ENST00000393357 KRT85P78386 507 aa19.44■□□□□ 0.7
PHTF1-205ENST00000393357 FAM177A1Q8N128 213 aaPredicted RBP19.44■□□□□ 0.7
PHTF1-205ENST00000393357 KNDC1Q76NI1 1749 aa19.44■□□□□ 0.7
PHTF1-205ENST00000393357 PNPLA6Q8IY17 1366 aa19.43■□□□□ 0.7
PHTF1-205ENST00000393357 ADGRB1O14514 1584 aa19.43■□□□□ 0.7
PHTF1-205ENST00000393357 RPGRIP1LQ68CZ1 1315 aa19.43■□□□□ 0.7
PHTF1-205ENST00000393357 GOLGA6L19H0YKK7 550 aa19.43■□□□□ 0.7
PHTF1-205ENST00000393357 KIF20AO95235 890 aa19.43■□□□□ 0.7
PHTF1-205ENST00000393357 HSP90B1P14625 803 aaKnown RBP19.43■□□□□ 0.7
PHTF1-205ENST00000393357 GTF2E1P29083 439 aaPredicted RBP19.43■□□□□ 0.7
PHTF1-205ENST00000393357 ZSCAN25Q6NSZ9 544 aa19.43■□□□□ 0.7
PHTF1-205ENST00000393357 GTF2F1P35269 517 aaKnown RBP eCLIP19.43■□□□□ 0.7
PHTF1-205ENST00000393357 ISM2Q6H9L7 571 aa19.43■□□□□ 0.7
PHTF1-205ENST00000393357 RHPN1Q8TCX5 695 aa19.43■□□□□ 0.7
PHTF1-205ENST00000393357 TAF6LQ9Y6J9 622 aa19.43■□□□□ 0.7
PHTF1-205ENST00000393357 RGS12O14924 1447 aa19.42■□□□□ 0.7
PHTF1-205ENST00000393357 ATP8B2P98198 1209 aa19.42■□□□□ 0.7
PHTF1-205ENST00000393357 CEP135Q66GS9 1140 aa19.42■□□□□ 0.7
PHTF1-205ENST00000393357 VWDEQ8N2E2 1590 aa19.42■□□□□ 0.7
PHTF1-205ENST00000393357 CYP46A1Q9Y6A2 500 aa19.42■□□□□ 0.7
PHTF1-205ENST00000393357 BECN2A8MW95 431 aa19.42■□□□□ 0.7
PHTF1-205ENST00000393357 POLR3GO15318 223 aaPredicted RBP19.42■□□□□ 0.7
PHTF1-205ENST00000393357 GNAI3P08754 354 aa19.42■□□□□ 0.7
PHTF1-205ENST00000393357 ANAPC15P60006 121 aa19.42■□□□□ 0.7
PHTF1-205ENST00000393357 CNTROBQ8N137 903 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms