RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 PI4K2BQ8TCG2 481 aa13.33□□□□□ -0.28
BEST1-201ENST00000378043 ESPNB1AK53 854 aa13.33□□□□□ -0.28
BEST1-201ENST00000378043 RHPN1Q8TCX5 695 aa13.33□□□□□ -0.28
BEST1-201ENST00000378043 PI4KAP2A4QPH2 592 aa13.32□□□□□ -0.28
BEST1-201ENST00000378043 ANXA1P04083 346 aa13.32□□□□□ -0.28
BEST1-201ENST00000378043 NASPP49321 788 aaPredicted RBP13.32□□□□□ -0.28
BEST1-201ENST00000378043 PI4KAP1Q8N8J0 262 aa13.32□□□□□ -0.28
BEST1-201ENST00000378043 LRRC59Q96AG4 307 aaKnown RBP13.32□□□□□ -0.28
BEST1-201ENST00000378043 PHRF1Q9P1Y6 1649 aaKnown RBP13.32□□□□□ -0.28
BEST1-201ENST00000378043 SRGAP3O43295 1099 aa13.32□□□□□ -0.28
BEST1-201ENST00000378043 RAB11FIP3O75154 756 aa13.32□□□□□ -0.28
BEST1-201ENST00000378043 HOXB7P09629 217 aa13.32□□□□□ -0.28
BEST1-201ENST00000378043 MCM2P49736 904 aa13.32□□□□□ -0.28
BEST1-201ENST00000378043 NCLP19338 710 aaKnown RBP13.31□□□□□ -0.28
BEST1-201ENST00000378043 MCCP23508 829 aa13.31□□□□□ -0.28
BEST1-201ENST00000378043 DNAAF4Q8WXU2 420 aa13.31□□□□□ -0.28
BEST1-201ENST00000378043 PPP1R9BQ96SB3 815 aa13.31□□□□□ -0.28
BEST1-201ENST00000378043 UPF3BQ9BZI7 483 aaKnown RBP13.31□□□□□ -0.28
BEST1-201ENST00000378043 NSFL1CQ9UNZ2 370 aaKnown RBP13.31□□□□□ -0.28
BEST1-201ENST00000378043 ADCY9O60503 1353 aa13.31□□□□□ -0.28
BEST1-201ENST00000378043 MAP4K4O95819 1239 aaPredicted RBP13.31□□□□□ -0.28
BEST1-201ENST00000378043 FOXD4L5Q5VV16 416 aaPredicted RBP13.31□□□□□ -0.28
BEST1-201ENST00000378043 FOXD4L4Q8WXT5 416 aaPredicted RBP13.31□□□□□ -0.28
BEST1-201ENST00000378043 BRD1O95696 1058 aa13.3□□□□□ -0.28
BEST1-201ENST00000378043 NOL8Q76FK4 1167 aaKnown RBP13.3□□□□□ -0.28
BEST1-201ENST00000378043 RBM27Q9P2N5 1060 aaKnown RBP13.3□□□□□ -0.28
BEST1-201ENST00000378043 HSPA4P34932 840 aa13.3□□□□□ -0.28
BEST1-201ENST00000378043 MPRIPQ6WCQ1 1025 aa13.3□□□□□ -0.28
BEST1-201ENST00000378043 INTS4Q96HW7 963 aaKnown RBP13.3□□□□□ -0.28
BEST1-201ENST00000378043 PXDNQ92626 1479 aa13.29□□□□□ -0.28
BEST1-201ENST00000378043 CRYBG1Q9Y4K1 1723 aa13.29□□□□□ -0.28
BEST1-201ENST00000378043 PSME1Q06323 249 aa13.29□□□□□ -0.28
BEST1-201ENST00000378043 ESCO1Q5FWF5 840 aa13.29□□□□□ -0.28
BEST1-201ENST00000378043 KIF1BPQ96EK5 621 aa13.29□□□□□ -0.28
BEST1-201ENST00000378043 TCHHQ07283 1943 aa13.29□□□□□ -0.28
BEST1-201ENST00000378043 ZBTB7CA1YPR0 619 aa13.29□□□□□ -0.28
BEST1-201ENST00000378043 BTBD11A6QL63 1104 aa13.29□□□□□ -0.28
BEST1-201ENST00000378043 AKAP4Q5JQC9 854 aa13.29□□□□□ -0.28
BEST1-201ENST00000378043 ZNF530Q6P9A1 599 aaPredicted RBP13.29□□□□□ -0.28
BEST1-201ENST00000378043 TMEM63CQ9P1W3 806 aa13.29□□□□□ -0.28
BEST1-201ENST00000378043 SGSM2O43147 1006 aa13.28□□□□□ -0.28
BEST1-201ENST00000378043 EPB41L2O43491 1005 aaKnown RBP13.28□□□□□ -0.28
BEST1-201ENST00000378043 PRIM1P49642 420 aaKnown RBP13.28□□□□□ -0.28
BEST1-201ENST00000378043 CCDC173Q0VFZ6 552 aa13.28□□□□□ -0.28
BEST1-201ENST00000378043 TRIM44Q96DX7 344 aaPredicted RBP13.28□□□□□ -0.28
BEST1-201ENST00000378043 RBSNQ9H1K0 784 aa13.28□□□□□ -0.28
BEST1-201ENST00000378043 TEFQ10587 303 aa13.28□□□□□ -0.28
BEST1-201ENST00000378043 KCNH5Q8NCM2 988 aa13.28□□□□□ -0.28
BEST1-201ENST00000378043 NCAPD2Q15021 1401 aa13.28□□□□□ -0.28
BEST1-201ENST00000378043 ADGRL3Q9HAR2 1447 aa13.28□□□□□ -0.28
BEST1-201ENST00000378043 RAD50Q92878 1312 aa13.27□□□□□ -0.28
BEST1-201ENST00000378043 PROSER3Q2NL68 480 aa13.27□□□□□ -0.29
BEST1-201ENST00000378043 ARHGEF25Q86VW2 580 aa13.26□□□□□ -0.29
BEST1-201ENST00000378043 ANKLE2Q86XL3 938 aa13.26□□□□□ -0.29
BEST1-201ENST00000378043 LSG1Q9H089 658 aaKnown RBP13.26□□□□□ -0.29
BEST1-201ENST00000378043 HEG1Q9ULI3 1381 aa13.26□□□□□ -0.29
BEST1-201ENST00000378043 PRAMEF22A3QJZ6 481 aa13.26□□□□□ -0.29
BEST1-201ENST00000378043 RNMTO43148 476 aaKnown RBP13.26□□□□□ -0.29
BEST1-201ENST00000378043 GCP02774 474 aa13.26□□□□□ -0.29
BEST1-201ENST00000378043 MTX1Q13505 466 aa13.26□□□□□ -0.29
BEST1-201ENST00000378043 PLEKHO1Q53GL0 409 aaPredicted RBP13.26□□□□□ -0.29
BEST1-201ENST00000378043 USP42Q9H9J4 1324 aaKnown RBP13.26□□□□□ -0.29
BEST1-201ENST00000378043 GIGYF1O75420 1035 aaPredicted RBP13.26□□□□□ -0.29
BEST1-201ENST00000378043 XPCQ01831 940 aaPredicted RBP13.26□□□□□ -0.29
BEST1-201ENST00000378043 RASEFQ8IZ41 740 aa13.26□□□□□ -0.29
BEST1-201ENST00000378043 ORAI2Q96SN7 254 aa13.26□□□□□ -0.29
BEST1-201ENST00000378043 DBF4Q9UBU7 674 aaPredicted RBP13.26□□□□□ -0.29
BEST1-201ENST00000378043 SNX14Q9Y5W7 946 aa13.26□□□□□ -0.29
BEST1-201ENST00000378043 SIPA1L3O60292 1781 aaPredicted RBP13.25□□□□□ -0.29
BEST1-201ENST00000378043 PLEKHG5O94827 1062 aa13.25□□□□□ -0.29
BEST1-201ENST00000378043 MAP3K2Q9Y2U5 619 aa13.25□□□□□ -0.29
BEST1-201ENST00000378043 TTC14Q96N46 770 aa13.25□□□□□ -0.29
BEST1-201ENST00000378043 SLIT3O75094 1523 aa13.24□□□□□ -0.29
BEST1-201ENST00000378043 AMOTQ4VCS5 1084 aa13.24□□□□□ -0.29
BEST1-201ENST00000378043 CNTROBQ8N137 903 aa13.24□□□□□ -0.29
BEST1-201ENST00000378043 CHMP4AQ9BY43 222 aa13.24□□□□□ -0.29
BEST1-201ENST00000378043 SYCE3A1L190 88 aa13.24□□□□□ -0.29
BEST1-201ENST00000378043 CWC27Q6UX04 472 aaKnown RBP13.24□□□□□ -0.29
BEST1-201ENST00000378043 AXIN2Q9Y2T1 843 aa13.24□□□□□ -0.29
BEST1-201ENST00000378043 CWF19L2Q2TBE0 894 aaKnown RBP13.23□□□□□ -0.29
BEST1-201ENST00000378043 HSP90AB4PQ58FF6 505 aa13.23□□□□□ -0.29
BEST1-201ENST00000378043 LRSAM1Q6UWE0 723 aa13.23□□□□□ -0.29
BEST1-201ENST00000378043 PDLIM2Q96JY6 352 aa13.23□□□□□ -0.29
BEST1-201ENST00000378043 SPG7Q9UQ90 795 aa13.23□□□□□ -0.29
BEST1-201ENST00000378043 RGPD5Q99666 1765 aa13.23□□□□□ -0.29
BEST1-201ENST00000378043 TTC41PQ6P2S7 1318 aa13.23□□□□□ -0.29
BEST1-201ENST00000378043 ZNF142P52746 1687 aaPredicted RBP13.23□□□□□ -0.29
BEST1-201ENST00000378043 CAMTA1Q9Y6Y1 1673 aa13.23□□□□□ -0.29
BEST1-201ENST00000378043 KSR2Q6VAB6 950 aa13.23□□□□□ -0.29
BEST1-201ENST00000378043 PA2G4Q9UQ80 394 aaKnown RBP13.23□□□□□ -0.29
BEST1-201ENST00000378043 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.23□□□□□ -0.29
BEST1-201ENST00000378043 OVOS2A0A0G2JMS6 1433 aa13.22□□□□□ -0.29
BEST1-201ENST00000378043 RPAP1Q9BWH6 1393 aaPredicted RBP13.22□□□□□ -0.29
BEST1-201ENST00000378043 ALDH1L1O75891 902 aa13.22□□□□□ -0.29
BEST1-201ENST00000378043 GLRX3O76003 335 aaKnown RBP13.22□□□□□ -0.29
BEST1-201ENST00000378043 C1orf141Q5JVX7 400 aa13.22□□□□□ -0.29
BEST1-201ENST00000378043 ANKRD24Q8TF21 1146 aa13.22□□□□□ -0.29
BEST1-201ENST00000378043 KAZALD1Q96I82 304 aa13.22□□□□□ -0.29
BEST1-201ENST00000378043 MBD3O95983 291 aa13.22□□□□□ -0.29
BEST1-201ENST00000378043 ANP32BQ92688 251 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms