RNA–Protein interactions for RNA: ENST00000371561.7

GRIN1-208, Transcript of glutamate ionotropic receptor NMDA type subunit 1, humanhuman

TSL 1 (best) BASIC

Gene GRIN1, Length 5,149 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN1-208ENST00000371561 DYDC1Q8WWB3 177 aa23.64■■□□□ 1.38
GRIN1-208ENST00000371561 DNAAF4Q8WXU2 420 aa23.64■■□□□ 1.38
GRIN1-208ENST00000371561 SYNJ1O43426 1573 aa23.64■■□□□ 1.38
GRIN1-208ENST00000371561 RBM5P52756 815 aaKnown RBP eCLIP23.64■■□□□ 1.37
GRIN1-208ENST00000371561 CTCFLQ8NI51 663 aaPredicted RBP23.64■■□□□ 1.37
GRIN1-208ENST00000371561 SSR1P43307 286 aaKnown RBP23.63■■□□□ 1.37
GRIN1-208ENST00000371561 UVSSAQ2YD98 709 aa23.63■■□□□ 1.37
GRIN1-208ENST00000371561 CPLX3Q8WVH0 158 aa23.63■■□□□ 1.37
GRIN1-208ENST00000371561 GJB2P29033 226 aa23.63■■□□□ 1.37
GRIN1-208ENST00000371561 VPS36Q86VN1 386 aa23.63■■□□□ 1.37
GRIN1-208ENST00000371561 LARP6Q9BRS8 491 aaKnown RBP23.63■■□□□ 1.37
GRIN1-208ENST00000371561 USO1O60763 962 aaKnown RBP23.63■■□□□ 1.37
GRIN1-208ENST00000371561 STX1AQ16623 288 aa23.63■■□□□ 1.37
GRIN1-208ENST00000371561 CCDC82Q8N4S0 544 aa23.63■■□□□ 1.37
GRIN1-208ENST00000371561 ZNF287Q9HBT7 754 aa23.63■■□□□ 1.37
GRIN1-208ENST00000371561 STARD3NLO95772 234 aa23.62■■□□□ 1.37
GRIN1-208ENST00000371561 CAVIN2O95810 425 aa23.62■■□□□ 1.37
GRIN1-208ENST00000371561 TMC6Q7Z403 805 aa23.62■■□□□ 1.37
GRIN1-208ENST00000371561 NUP88Q99567 741 aaPredicted RBP23.62■■□□□ 1.37
GRIN1-208ENST00000371561 MYD88Q99836 296 aa23.62■■□□□ 1.37
GRIN1-208ENST00000371561 ZNF213O14771 459 aa23.62■■□□□ 1.37
GRIN1-208ENST00000371561 YEATS4O95619 227 aa23.62■■□□□ 1.37
GRIN1-208ENST00000371561 UBE2HP62256 183 aa23.62■■□□□ 1.37
GRIN1-208ENST00000371561 KCNH5Q8NCM2 988 aa23.62■■□□□ 1.37
GRIN1-208ENST00000371561 ECHDC1Q9NTX5 307 aa23.62■■□□□ 1.37
GRIN1-208ENST00000371561 TSG101Q99816 390 aa23.62■■□□□ 1.37
GRIN1-208ENST00000371561 MAP2K1Q02750 393 aaPredicted RBP23.61■■□□□ 1.37
GRIN1-208ENST00000371561 CCDC113Q9H0I3 377 aa23.61■■□□□ 1.37
GRIN1-208ENST00000371561 GOLGA8BA8MQT2 603 aa23.61■■□□□ 1.37
GRIN1-208ENST00000371561 ZC3H6P61129 1189 aaKnown RBP23.61■■□□□ 1.37
GRIN1-208ENST00000371561 SEC63Q9UGP8 760 aaKnown RBP23.61■■□□□ 1.37
GRIN1-208ENST00000371561 SLC12A7Q9Y666 1083 aa23.61■■□□□ 1.37
GRIN1-208ENST00000371561 PTPRCP08575 1304 aa23.61■■□□□ 1.37
GRIN1-208ENST00000371561 CCT2P78371 535 aaKnown RBP23.61■■□□□ 1.37
GRIN1-208ENST00000371561 EVI5LQ96CN4 794 aa23.61■■□□□ 1.37
GRIN1-208ENST00000371561 BIN1O00499 593 aa23.6■■□□□ 1.37
GRIN1-208ENST00000371561 DESP17661 470 aa23.6■■□□□ 1.37
GRIN1-208ENST00000371561 DYNC1I1O14576 645 aa23.6■■□□□ 1.37
GRIN1-208ENST00000371561 RBM27Q9P2N5 1060 aaKnown RBP23.6■■□□□ 1.37
GRIN1-208ENST00000371561 IGHDP01880 384 aa23.6■■□□□ 1.37
GRIN1-208ENST00000371561 FGFR1OPO95684 399 aaKnown RBP23.6■■□□□ 1.37
GRIN1-208ENST00000371561 POTEJP0CG39 1038 aa23.6■■□□□ 1.37
GRIN1-208ENST00000371561 PRIMPOLQ96LW4 560 aa23.6■■□□□ 1.37
GRIN1-208ENST00000371561 MAP3K12Q12852 859 aa23.59■■□□□ 1.37
GRIN1-208ENST00000371561 GIMAP7Q8NHV1 300 aa23.59■■□□□ 1.37
GRIN1-208ENST00000371561 GOLGA6L9A6NEM1 432 aa23.59■■□□□ 1.37
GRIN1-208ENST00000371561 IQCA1Q86XH1 822 aa23.59■■□□□ 1.37
GRIN1-208ENST00000371561 POTEB2H3BUK9 544 aa23.59■■□□□ 1.37
GRIN1-208ENST00000371561 FLIIQ13045 1269 aa23.59■■□□□ 1.37
GRIN1-208ENST00000371561 SNW1Q13573 536 aaKnown RBP23.59■■□□□ 1.37
GRIN1-208ENST00000371561 PPP4R3BQ5MIZ7 849 aa23.59■■□□□ 1.37
GRIN1-208ENST00000371561 SMARCC1Q92922 1105 aaPredicted RBP23.59■■□□□ 1.37
GRIN1-208ENST00000371561 PTCD1O75127 700 aaKnown RBP23.59■■□□□ 1.37
GRIN1-208ENST00000371561 IFFO1Q0D2I5 559 aa23.59■■□□□ 1.37
GRIN1-208ENST00000371561 EMILIN1Q9Y6C2 1016 aa23.59■■□□□ 1.37
GRIN1-208ENST00000371561 HECW1Q76N89 1606 aa23.59■■□□□ 1.37
GRIN1-208ENST00000371561 RAB34Q9BZG1 259 aa23.58■■□□□ 1.37
GRIN1-208ENST00000371561 MKNK2Q9HBH9 465 aa23.58■■□□□ 1.37
GRIN1-208ENST00000371561 GOLGA8AA7E2F4 631 aa23.58■■□□□ 1.37
GRIN1-208ENST00000371561 HCLS1P14317 486 aaPredicted RBP23.58■■□□□ 1.37
GRIN1-208ENST00000371561 TDRD12Q587J7 1177 aaKnown RBP23.58■■□□□ 1.37
GRIN1-208ENST00000371561 NME9Q86XW9 330 aa23.57■■□□□ 1.36
GRIN1-208ENST00000371561 GTF2F1P35269 517 aaKnown RBP eCLIP23.57■■□□□ 1.36
GRIN1-208ENST00000371561 DNA2P51530 1060 aa23.57■■□□□ 1.36
GRIN1-208ENST00000371561 DBF4Q9UBU7 674 aaPredicted RBP23.57■■□□□ 1.36
GRIN1-208ENST00000371561 IFIT3O14879 490 aaKnown RBP23.57■■□□□ 1.36
GRIN1-208ENST00000371561 ZSCAN23Q3MJ62 389 aa23.57■■□□□ 1.36
GRIN1-208ENST00000371561 RAPGEF3O95398 923 aa23.57■■□□□ 1.36
GRIN1-208ENST00000371561 SSRP1Q08945 709 aaKnown RBP23.57■■□□□ 1.36
GRIN1-208ENST00000371561 TTC22Q5TAA0 569 aa23.57■■□□□ 1.36
GRIN1-208ENST00000371561 RNF41Q9H4P4 317 aaPredicted RBP23.57■■□□□ 1.36
GRIN1-208ENST00000371561 IFIT5Q13325 482 aaKnown RBP23.56■■□□□ 1.36
GRIN1-208ENST00000371561 WAPLQ7Z5K2 1190 aa23.56■■□□□ 1.36
GRIN1-208ENST00000371561 NCOA1Q15788 1441 aa23.56■■□□□ 1.36
GRIN1-208ENST00000371561 SUPT6HQ7KZ85 1726 aaKnown RBP23.56■■□□□ 1.36
GRIN1-208ENST00000371561 FAM107BQ9H098 131 aa23.56■■□□□ 1.36
GRIN1-208ENST00000371561 RANBP6O60518 1105 aaKnown RBP23.56■■□□□ 1.36
GRIN1-208ENST00000371561 AMOTQ4VCS5 1084 aa23.56■■□□□ 1.36
GRIN1-208ENST00000371561 CCDC178Q5BJE1 867 aa23.56■■□□□ 1.36
GRIN1-208ENST00000371561 CAVIN4Q5BKX8 364 aa23.56■■□□□ 1.36
GRIN1-208ENST00000371561 CCDC194A0A1B0GVG4 234 aa23.55■■□□□ 1.36
GRIN1-208ENST00000371561 BMS1Q14692 1282 aaKnown RBP23.55■■□□□ 1.36
GRIN1-208ENST00000371561 SPECC1Q5M775 1068 aa23.55■■□□□ 1.36
GRIN1-208ENST00000371561 LRSAM1Q6UWE0 723 aa23.55■■□□□ 1.36
GRIN1-208ENST00000371561 CCDC91Q7Z6B0 441 aa23.55■■□□□ 1.36
GRIN1-208ENST00000371561 TRERF1Q96PN7 1200 aa23.55■■□□□ 1.36
GRIN1-208ENST00000371561 MATR3P43243 847 aaKnown RBP eCLIP23.55■■□□□ 1.36
GRIN1-208ENST00000371561 TMX1Q9H3N1 280 aa23.55■■□□□ 1.36
GRIN1-208ENST00000371561 USP16Q9Y5T5 823 aa23.55■■□□□ 1.36
GRIN1-208ENST00000371561 GSTTP1A0A1W2PQM5 241 aa23.55■■□□□ 1.36
GRIN1-208ENST00000371561 POLR3DP05423 398 aaPredicted RBP23.55■■□□□ 1.36
GRIN1-208ENST00000371561 BICDL1Q6ZP65 573 aa23.55■■□□□ 1.36
GRIN1-208ENST00000371561 ANKLE2Q86XL3 938 aa23.55■■□□□ 1.36
GRIN1-208ENST00000371561 PODXL2Q9NZ53 605 aa23.55■■□□□ 1.36
GRIN1-208ENST00000371561 KIF20AO95235 890 aa23.54■■□□□ 1.36
GRIN1-208ENST00000371561 PAXBP1Q9Y5B6 917 aa23.54■■□□□ 1.36
GRIN1-208ENST00000371561 MICALCLQ6ZW33 695 aa23.54■■□□□ 1.36
GRIN1-208ENST00000371561 CCDC141Q6ZP82 1450 aa23.54■■□□□ 1.36
GRIN1-208ENST00000371561 GOLGA6L10A0A0M3HER8 536 aa23.53■■□□□ 1.36
GRIN1-208ENST00000371561 HYPKQ9NX55 129 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms