RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 NOS2P35228 1153 aa7.91□□□□□ -1.14
RNU6-560P-201ENST00000364007 PSMA6P60900 246 aaKnown RBP7.91□□□□□ -1.14
RNU6-560P-201ENST00000364007 TAS1R3Q7RTX0 852 aa7.91□□□□□ -1.14
RNU6-560P-201ENST00000364007 C2orf49Q9BVC5 232 aaPredicted RBP7.91□□□□□ -1.14
RNU6-560P-201ENST00000364007 GMPR2Q9P2T1 348 aaKnown RBP7.91□□□□□ -1.14
RNU6-560P-201ENST00000364007 TRIM26Q12899 539 aaPredicted RBP7.9□□□□□ -1.14
RNU6-560P-201ENST00000364007 TEAD4Q15561 434 aa7.9□□□□□ -1.14
RNU6-560P-201ENST00000364007 GNASQ5JWF2 1037 aa7.9□□□□□ -1.14
RNU6-560P-201ENST00000364007 C1orf216Q8TAB5 229 aa7.9□□□□□ -1.14
RNU6-560P-201ENST00000364007 L3MBTL2Q969R5 705 aa7.9□□□□□ -1.14
RNU6-560P-201ENST00000364007 NIFKQ9BYG3 293 aaKnown RBP7.9□□□□□ -1.14
RNU6-560P-201ENST00000364007 SEPT3Q9UH03 358 aa7.9□□□□□ -1.14
RNU6-560P-201ENST00000364007 ZNF232Q9UNY5 417 aa7.9□□□□□ -1.14
RNU6-560P-201ENST00000364007 HCN4Q9Y3Q4 1203 aa7.9□□□□□ -1.14
RNU6-560P-201ENST00000364007 SERTM1A2A2V5 107 aa7.89□□□□□ -1.15
RNU6-560P-201ENST00000364007 EML1O00423 815 aa7.89□□□□□ -1.15
RNU6-560P-201ENST00000364007 FOXO3O43524 673 aa7.89□□□□□ -1.15
RNU6-560P-201ENST00000364007 TXLNAP40222 546 aa7.89□□□□□ -1.15
RNU6-560P-201ENST00000364007 PLA2G4AP47712 749 aa7.89□□□□□ -1.15
RNU6-560P-201ENST00000364007 NAA30Q147X3 362 aaPredicted RBP7.89□□□□□ -1.15
RNU6-560P-201ENST00000364007 NBPF10Q6P3W6 841 aaKnown RBP7.89□□□□□ -1.15
RNU6-560P-201ENST00000364007 NBPF15Q8N660 670 aa7.89□□□□□ -1.15
RNU6-560P-201ENST00000364007 MAN1A2O60476 641 aa7.88□□□□□ -1.15
RNU6-560P-201ENST00000364007 B4GALNT3Q6L9W6 998 aa7.88□□□□□ -1.15
RNU6-560P-201ENST00000364007 TXNDC2Q86VQ3 553 aa7.88□□□□□ -1.15
RNU6-560P-201ENST00000364007 STAG2Q8N3U4 1231 aa7.88□□□□□ -1.15
RNU6-560P-201ENST00000364007 KCTD17Q8N5Z5 321 aa7.88□□□□□ -1.15
RNU6-560P-201ENST00000364007 AIDAQ96BJ3 306 aa7.88□□□□□ -1.15
RNU6-560P-201ENST00000364007 POTECB2RU33 542 aa7.87□□□□□ -1.15
RNU6-560P-201ENST00000364007 SNRPBP14678 240 aaKnown RBP7.87□□□□□ -1.15
RNU6-560P-201ENST00000364007 ARID4AP29374 1257 aaPredicted RBP7.87□□□□□ -1.15
RNU6-560P-201ENST00000364007 POTEAQ6S8J7 498 aa7.87□□□□□ -1.15
RNU6-560P-201ENST00000364007 VTI1AQ96AJ9 217 aa7.87□□□□□ -1.15
RNU6-560P-201ENST00000364007 NGLY1Q96IV0 654 aa7.87□□□□□ -1.15
RNU6-560P-201ENST00000364007 SAP130Q9H0E3 1048 aa7.87□□□□□ -1.15
RNU6-560P-201ENST00000364007 CHMP3Q9Y3E7 222 aa7.87□□□□□ -1.15
RNU6-560P-201ENST00000364007 SERPINB4P48594 390 aa7.86□□□□□ -1.15
RNU6-560P-201ENST00000364007 KCNA1Q09470 495 aa7.86□□□□□ -1.15
RNU6-560P-201ENST00000364007 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.86□□□□□ -1.15
RNU6-560P-201ENST00000364007 SENP2Q9HC62 589 aa7.86□□□□□ -1.15
RNU6-560P-201ENST00000364007 IVNS1ABPQ9Y6Y0 642 aa7.86□□□□□ -1.15
RNU6-560P-201ENST00000364007 ALDH16A1Q8IZ83 802 aa7.85□□□□□ -1.15
RNU6-560P-201ENST00000364007 KLRG1Q96E93 195 aa7.85□□□□□ -1.15
RNU6-560P-201ENST00000364007 TRIM47Q96LD4 638 aa7.85□□□□□ -1.15
RNU6-560P-201ENST00000364007 PHACTR1Q9C0D0 580 aa7.85□□□□□ -1.15
RNU6-560P-201ENST00000364007 TIMMDC1Q9NPL8 285 aa7.85□□□□□ -1.15
RNU6-560P-201ENST00000364007 SENP3-EIF4A1A0A087X0R7 540 aa7.84□□□□□ -1.15
RNU6-560P-201ENST00000364007 WDR44Q5JSH3 913 aa7.84□□□□□ -1.15
RNU6-560P-201ENST00000364007 GTF3C2Q8WUA4 911 aaPredicted RBP7.84□□□□□ -1.15
RNU6-560P-201ENST00000364007 C7orf43Q8WVR3 580 aa7.84□□□□□ -1.15
RNU6-560P-201ENST00000364007 COL26A1Q96A83 441 aa7.84□□□□□ -1.15
RNU6-560P-201ENST00000364007 KIFC2Q96AC6 838 aa7.84□□□□□ -1.15
RNU6-560P-201ENST00000364007 QTRT2Q9H974 415 aaKnown RBP7.84□□□□□ -1.15
RNU6-560P-201ENST00000364007 ANO2Q9NQ90 1003 aa7.84□□□□□ -1.15
RNU6-560P-201ENST00000364007 LRFN2Q9ULH4 789 aa7.84□□□□□ -1.15
RNU6-560P-201ENST00000364007 C11orf95C9JLR9 678 aaPredicted RBP7.83□□□□□ -1.16
RNU6-560P-201ENST00000364007 PTCD1O75127 700 aaKnown RBP7.83□□□□□ -1.16
RNU6-560P-201ENST00000364007 ABL1P00519 1130 aa7.83□□□□□ -1.16
RNU6-560P-201ENST00000364007 HIRAP54198 1017 aaPredicted RBP7.83□□□□□ -1.16
RNU6-560P-201ENST00000364007 PTSQ03393 145 aa7.83□□□□□ -1.16
RNU6-560P-201ENST00000364007 COX20Q5RI15 118 aa7.83□□□□□ -1.16
RNU6-560P-201ENST00000364007 CCER1Q8TC90 406 aaPredicted RBP7.83□□□□□ -1.16
RNU6-560P-201ENST00000364007 GNEQ9Y223 722 aaKnown RBP7.83□□□□□ -1.16
RNU6-560P-201ENST00000364007 DNMT3AQ9Y6K1 912 aaPredicted RBP7.83□□□□□ -1.16
RNU6-560P-201ENST00000364007 MSX1P28360 303 aa7.82□□□□□ -1.16
RNU6-560P-201ENST00000364007 MTMR3Q13615 1198 aa7.82□□□□□ -1.16
RNU6-560P-201ENST00000364007 GAS2L1Q99501 681 aaPredicted RBP7.82□□□□□ -1.16
RNU6-560P-201ENST00000364007 GZF1Q9H116 711 aaPredicted RBP7.82□□□□□ -1.16
RNU6-560P-201ENST00000364007 GPAMQ9HCL2 828 aa7.82□□□□□ -1.16
RNU6-560P-201ENST00000364007 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.82□□□□□ -1.16
RNU6-560P-201ENST00000364007 ZBTB7CA1YPR0 619 aa7.81□□□□□ -1.16
RNU6-560P-201ENST00000364007 SLC35F4A4IF30 521 aa7.81□□□□□ -1.16
RNU6-560P-201ENST00000364007 ATP4AP20648 1035 aa7.81□□□□□ -1.16
RNU6-560P-201ENST00000364007 ZNF211Q13398 564 aaPredicted RBP7.81□□□□□ -1.16
RNU6-560P-201ENST00000364007 NBPF1Q3BBV0 1214 aa7.81□□□□□ -1.16
RNU6-560P-201ENST00000364007 C16orf46Q6P387 395 aa7.81□□□□□ -1.16
RNU6-560P-201ENST00000364007 ZIC5Q96T25 663 aa7.81□□□□□ -1.16
RNU6-560P-201ENST00000364007 ZDHHC3Q9NYG2 299 aa7.81□□□□□ -1.16
RNU6-560P-201ENST00000364007 KLK14Q9P0G3 267 aa7.81□□□□□ -1.16
RNU6-560P-201ENST00000364007 DYRK1BQ9Y463 629 aa7.81□□□□□ -1.16
RNU6-560P-201ENST00000364007 A0A1B0GTH6 734 aa7.8□□□□□ -1.16
RNU6-560P-201ENST00000364007 DGKZQ13574 1117 aa7.8□□□□□ -1.16
RNU6-560P-201ENST00000364007 FAM26DQ5JW98 314 aa7.8□□□□□ -1.16
RNU6-560P-201ENST00000364007 C1orf53Q5VUE5 145 aa7.8□□□□□ -1.16
RNU6-560P-201ENST00000364007 RHPN1Q8TCX5 695 aa7.8□□□□□ -1.16
RNU6-560P-201ENST00000364007 MYO19Q96H55 970 aa7.8□□□□□ -1.16
RNU6-560P-201ENST00000364007 RUBCNLQ9H714 662 aa7.8□□□□□ -1.16
RNU6-560P-201ENST00000364007 MTMR7Q9Y216 660 aa7.8□□□□□ -1.16
RNU6-560P-201ENST00000364007 F11P03951 625 aa7.79□□□□□ -1.16
RNU6-560P-201ENST00000364007 TATP17735 454 aaPredicted RBP7.79□□□□□ -1.16
RNU6-560P-201ENST00000364007 RTN1Q16799 776 aa7.79□□□□□ -1.16
RNU6-560P-201ENST00000364007 BICDL1Q6ZP65 573 aa7.79□□□□□ -1.16
RNU6-560P-201ENST00000364007 ZNF280CQ8ND82 737 aa7.79□□□□□ -1.16
RNU6-560P-201ENST00000364007 PATL2C9JE40 543 aaKnown RBP7.78□□□□□ -1.16
RNU6-560P-201ENST00000364007 TNFRSF10BO14763 440 aa7.78□□□□□ -1.16
RNU6-560P-201ENST00000364007 ARSJQ5FYB0 599 aaPredicted RBP7.78□□□□□ -1.16
RNU6-560P-201ENST00000364007 CCDC155Q8N6L0 562 aa7.78□□□□□ -1.16
RNU6-560P-201ENST00000364007 HELQQ8TDG4 1101 aa7.78□□□□□ -1.16
RNU6-560P-201ENST00000364007 BCS1LQ9Y276 419 aa7.78□□□□□ -1.16
RNU6-560P-201ENST00000364007 A0A1W2PNR3 127 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 186.2 ms