RNA–Protein interactions for RNA: ENST00000342895.7

LRRC39-201, Transcript of leucine rich repeat containing 39, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRC39, Length 1,881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-201ENST00000342895 USP17L15C9J2P7 530 aa6.02□□□□□ -1.45
LRRC39-201ENST00000342895 USP17L10C9JJH3 530 aa6.02□□□□□ -1.45
LRRC39-201ENST00000342895 USP17L13C9JLJ4 530 aa6.02□□□□□ -1.45
LRRC39-201ENST00000342895 USP17L12C9JPN9 530 aa6.02□□□□□ -1.45
LRRC39-201ENST00000342895 USP17L11C9JVI0 530 aa6.02□□□□□ -1.45
LRRC39-201ENST00000342895 USP17L21D6R901 530 aa6.02□□□□□ -1.45
LRRC39-201ENST00000342895 USP17L18D6R9N7 530 aa6.02□□□□□ -1.45
LRRC39-201ENST00000342895 USP17L22D6RA61 530 aa6.02□□□□□ -1.45
LRRC39-201ENST00000342895 USP17L17D6RBQ6 530 aa6.02□□□□□ -1.45
LRRC39-201ENST00000342895 USP17L19D6RCP7 530 aa6.02□□□□□ -1.45
LRRC39-201ENST00000342895 USP17L20D6RJB6 530 aa6.02□□□□□ -1.45
LRRC39-201ENST00000342895 SEC13P55735 322 aa6.02□□□□□ -1.45
LRRC39-201ENST00000342895 USP17L24Q0WX57 530 aa6.02□□□□□ -1.45
LRRC39-201ENST00000342895 ZNF594Q96JF6 807 aaPredicted RBP6.02□□□□□ -1.45
LRRC39-201ENST00000342895 CRISPLD1Q9H336 500 aa6.02□□□□□ -1.45
LRRC39-201ENST00000342895 SERPINA10Q9UK55 444 aa6.02□□□□□ -1.45
LRRC39-201ENST00000342895 MSX1P28360 303 aa6.01□□□□□ -1.45
LRRC39-201ENST00000342895 PLA2G4AP47712 749 aa6.01□□□□□ -1.45
LRRC39-201ENST00000342895 CRTC2Q53ET0 693 aaPredicted RBP6.01□□□□□ -1.45
LRRC39-201ENST00000342895 FOXR1Q6PIV2 292 aa6.01□□□□□ -1.45
LRRC39-201ENST00000342895 POTEAQ6S8J7 498 aa6.01□□□□□ -1.45
LRRC39-201ENST00000342895 RIPOR1Q6ZS17 1223 aa6.01□□□□□ -1.45
LRRC39-201ENST00000342895 TNS4Q8IZW8 715 aa6.01□□□□□ -1.45
LRRC39-201ENST00000342895 GAS2L2Q8NHY3 880 aa6.01□□□□□ -1.45
LRRC39-201ENST00000342895 NUCKS1Q9H1E3 243 aaKnown RBP6.01□□□□□ -1.45
LRRC39-201ENST00000342895 USP3Q9Y6I4 520 aa6.01□□□□□ -1.45
LRRC39-201ENST00000342895 SRPK2P78362 688 aaKnown RBP6□□□□□ -1.45
LRRC39-201ENST00000342895 NBPF1Q3BBV0 1214 aa6□□□□□ -1.45
LRRC39-201ENST00000342895 ANKMY2Q8IV38 441 aa6□□□□□ -1.45
LRRC39-201ENST00000342895 SLC9A9Q8IVB4 645 aa6□□□□□ -1.45
LRRC39-201ENST00000342895 COL25A1Q9BXS0 654 aaPredicted RBP6□□□□□ -1.45
LRRC39-201ENST00000342895 CABP1Q9NZU7 370 aa6□□□□□ -1.45
LRRC39-201ENST00000342895 CSB-PGBD3P0DP91 1061 aa6□□□□□ -1.45
LRRC39-201ENST00000342895 HIRAP54198 1017 aaPredicted RBP6□□□□□ -1.45
LRRC39-201ENST00000342895 KRT76Q01546 638 aa6□□□□□ -1.45
LRRC39-201ENST00000342895 ELOAQ14241 798 aaKnown RBP6□□□□□ -1.45
LRRC39-201ENST00000342895 PGBD3Q8N328 593 aa6□□□□□ -1.45
LRRC39-201ENST00000342895 STAG2Q8N3U4 1231 aa6□□□□□ -1.45
LRRC39-201ENST00000342895 KCTD17Q8N5Z5 321 aa6□□□□□ -1.45
LRRC39-201ENST00000342895 CCDC97Q96F63 343 aaPredicted RBP6□□□□□ -1.45
LRRC39-201ENST00000342895 SFI1A8K8P3 1242 aa5.99□□□□□ -1.45
LRRC39-201ENST00000342895 ATP4AP20648 1035 aa5.99□□□□□ -1.45
LRRC39-201ENST00000342895 PSMA6P60900 246 aaKnown RBP5.99□□□□□ -1.45
LRRC39-201ENST00000342895 DPYDQ12882 1025 aa5.99□□□□□ -1.45
LRRC39-201ENST00000342895 ARXQ96QS3 562 aa5.99□□□□□ -1.45
LRRC39-201ENST00000342895 CFHR5Q9BXR6 569 aa5.99□□□□□ -1.45
LRRC39-201ENST00000342895 GPC6Q9Y625 555 aaPredicted RBP5.99□□□□□ -1.45
LRRC39-201ENST00000342895 THBS1P07996 1170 aa5.98□□□□□ -1.45
LRRC39-201ENST00000342895 TATP17735 454 aaPredicted RBP5.98□□□□□ -1.45
LRRC39-201ENST00000342895 NOS2P35228 1153 aa5.98□□□□□ -1.45
LRRC39-201ENST00000342895 UBAP2LQ14157 1087 aaKnown RBP5.98□□□□□ -1.45
LRRC39-201ENST00000342895 EFHC2Q5JST6 749 aa5.98□□□□□ -1.45
LRRC39-201ENST00000342895 NLRP8Q86W28 1048 aa5.98□□□□□ -1.45
LRRC39-201ENST00000342895 TSEN2Q8NCE0 465 aaKnown RBP5.98□□□□□ -1.45
LRRC39-201ENST00000342895 ZDHHC1Q8WTX9 485 aa5.98□□□□□ -1.45
LRRC39-201ENST00000342895 TRERF1Q96PN7 1200 aa5.98□□□□□ -1.45
LRRC39-201ENST00000342895 GPAMQ9HCL2 828 aa5.98□□□□□ -1.45
LRRC39-201ENST00000342895 SERTM1A2A2V5 107 aa5.98□□□□□ -1.45
LRRC39-201ENST00000342895 GAS6Q14393 721 aa5.98□□□□□ -1.45
LRRC39-201ENST00000342895 L3MBTL2Q969R5 705 aa5.98□□□□□ -1.45
LRRC39-201ENST00000342895 GTPBP3Q969Y2 492 aaKnown RBP5.98□□□□□ -1.45
LRRC39-201ENST00000342895 CNTNAP3BQ96NU0 1288 aa5.98□□□□□ -1.45
LRRC39-201ENST00000342895 CNTNAP3Q9BZ76 1288 aa5.98□□□□□ -1.45
LRRC39-201ENST00000342895 TSPAN10Q9H1Z9 355 aaPredicted RBP5.98□□□□□ -1.45
LRRC39-201ENST00000342895 RUBCNLQ9H714 662 aa5.98□□□□□ -1.45
LRRC39-201ENST00000342895 CHMP3Q9Y3E7 222 aa5.98□□□□□ -1.45
LRRC39-201ENST00000342895 EML1O00423 815 aa5.97□□□□□ -1.45
LRRC39-201ENST00000342895 SLURP2P0DP57 97 aa5.97□□□□□ -1.45
LRRC39-201ENST00000342895 RNFT1Q5M7Z0 435 aa5.97□□□□□ -1.45
LRRC39-201ENST00000342895 C1orf53Q5VUE5 145 aa5.97□□□□□ -1.45
LRRC39-201ENST00000342895 FIGNL1Q6PIW4 674 aa5.97□□□□□ -1.45
LRRC39-201ENST00000342895 ZSCAN1Q8NBB4 408 aa5.97□□□□□ -1.45
LRRC39-201ENST00000342895 AIDAQ96BJ3 306 aa5.97□□□□□ -1.45
LRRC39-201ENST00000342895 KRTAP4-11Q9BYQ6 195 aa5.97□□□□□ -1.45
LRRC39-201ENST00000342895 MBIPQ9NS73 344 aa5.97□□□□□ -1.45
LRRC39-201ENST00000342895 PHF24Q9UPV7 400 aa5.97□□□□□ -1.45
LRRC39-201ENST00000342895 ATAD2Q6PL18 1390 aa5.96□□□□□ -1.45
LRRC39-201ENST00000342895 C21orf2O43822 256 aa5.96□□□□□ -1.45
LRRC39-201ENST00000342895 ATG7O95352 703 aa5.96□□□□□ -1.45
LRRC39-201ENST00000342895 RFX1P22670 979 aa5.96□□□□□ -1.45
LRRC39-201ENST00000342895 SRSF11Q05519 484 aaKnown RBP5.96□□□□□ -1.45
LRRC39-201ENST00000342895 FAM200AQ8TCP9 573 aa5.96□□□□□ -1.45
LRRC39-201ENST00000342895 PBXIP1Q96AQ6 731 aa5.96□□□□□ -1.45
LRRC39-201ENST00000342895 NDFIP2Q9NV92 336 aa5.96□□□□□ -1.45
LRRC39-201ENST00000342895 ARID3CA6NKF2 412 aa5.96□□□□□ -1.46
LRRC39-201ENST00000342895 IGFBP4P22692 258 aa5.96□□□□□ -1.46
LRRC39-201ENST00000342895 C7orf43Q8WVR3 580 aa5.96□□□□□ -1.46
LRRC39-201ENST00000342895 ZIC5Q96T25 663 aa5.96□□□□□ -1.46
LRRC39-201ENST00000342895 ATXN7L1Q9ULK2 861 aaPredicted RBP5.96□□□□□ -1.46
LRRC39-201ENST00000342895 NOVA2Q9UNW9 492 aaKnown RBP5.96□□□□□ -1.46
LRRC39-201ENST00000342895 A0A1W2PNR3 127 aa5.95□□□□□ -1.46
LRRC39-201ENST00000342895 TBCELQ5QJ74 424 aa5.95□□□□□ -1.46
LRRC39-201ENST00000342895 SAMD5Q5TGI4 173 aa5.95□□□□□ -1.46
LRRC39-201ENST00000342895 C2orf49Q9BVC5 232 aaPredicted RBP5.95□□□□□ -1.46
LRRC39-201ENST00000342895 PARP3Q9Y6F1 533 aa5.95□□□□□ -1.46
LRRC39-201ENST00000342895 GPR25O00155 361 aa5.94□□□□□ -1.46
LRRC39-201ENST00000342895 PPP1R12BO60237 982 aaPredicted RBP5.94□□□□□ -1.46
LRRC39-201ENST00000342895 TXLNAP40222 546 aa5.94□□□□□ -1.46
LRRC39-201ENST00000342895 SWI5Q1ZZU3 235 aa5.94□□□□□ -1.46
LRRC39-201ENST00000342895 HINFPQ9BQA5 517 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms