RNA–Protein interactions for RNA: ENST00000328392.10

SKP1-201, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-201ENST00000328392 CRTC2Q53ET0 693 aaPredicted RBP7.46□□□□□ -1.22
SKP1-201ENST00000328392 CFAP70Q5T0N1 1121 aa7.46□□□□□ -1.22
SKP1-201ENST00000328392 TSEN2Q8NCE0 465 aaKnown RBP7.46□□□□□ -1.22
SKP1-201ENST00000328392 CDCA8Q53HL2 280 aa7.45□□□□□ -1.22
SKP1-201ENST00000328392 SH3PXD2AQ5TCZ1 1133 aa7.45□□□□□ -1.22
SKP1-201ENST00000328392 SLC9A9Q8IVB4 645 aa7.45□□□□□ -1.22
SKP1-201ENST00000328392 SIX5Q8N196 739 aa7.45□□□□□ -1.22
SKP1-201ENST00000328392 LGR5O75473 907 aa7.44□□□□□ -1.22
SKP1-201ENST00000328392 ADAMTS2O95450 1211 aa7.44□□□□□ -1.22
SKP1-201ENST00000328392 SLURP2P0DP57 97 aa7.44□□□□□ -1.22
SKP1-201ENST00000328392 CSB-PGBD3P0DP91 1061 aa7.44□□□□□ -1.22
SKP1-201ENST00000328392 TXLNAP40222 546 aa7.44□□□□□ -1.22
SKP1-201ENST00000328392 ZNF385CQ66K41 422 aaPredicted RBP7.44□□□□□ -1.22
SKP1-201ENST00000328392 FOXR1Q6PIV2 292 aa7.44□□□□□ -1.22
SKP1-201ENST00000328392 PGBD3Q8N328 593 aa7.44□□□□□ -1.22
SKP1-201ENST00000328392 TSPAN10Q9H1Z9 355 aaPredicted RBP7.44□□□□□ -1.22
SKP1-201ENST00000328392 SERPINA10Q9UK55 444 aa7.44□□□□□ -1.22
SKP1-201ENST00000328392 RFX1P22670 979 aa7.43□□□□□ -1.22
SKP1-201ENST00000328392 PTK7Q13308 1070 aa7.43□□□□□ -1.22
SKP1-201ENST00000328392 GAS2L2Q8NHY3 880 aa7.43□□□□□ -1.22
SKP1-201ENST00000328392 L3MBTL2Q969R5 705 aa7.43□□□□□ -1.22
SKP1-201ENST00000328392 KLRG1Q96E93 195 aa7.43□□□□□ -1.22
SKP1-201ENST00000328392 TRERF1Q96PN7 1200 aa7.43□□□□□ -1.22
SKP1-201ENST00000328392 CRISPLD1Q9H336 500 aa7.43□□□□□ -1.22
SKP1-201ENST00000328392 NOS2P35228 1153 aa7.42□□□□□ -1.22
SKP1-201ENST00000328392 SRSF11Q05519 484 aaKnown RBP7.42□□□□□ -1.22
SKP1-201ENST00000328392 DPYDQ12882 1025 aa7.42□□□□□ -1.22
SKP1-201ENST00000328392 TEAD4Q15561 434 aa7.42□□□□□ -1.22
SKP1-201ENST00000328392 LARP1Q6PKG0 1096 aaKnown RBP7.42□□□□□ -1.22
SKP1-201ENST00000328392 LYPD4Q6UWN0 246 aa7.42□□□□□ -1.22
SKP1-201ENST00000328392 ZIC5Q96T25 663 aa7.42□□□□□ -1.22
SKP1-201ENST00000328392 VRTNQ9H8Y1 702 aa7.42□□□□□ -1.22
SKP1-201ENST00000328392 MBIPQ9NS73 344 aa7.42□□□□□ -1.22
SKP1-201ENST00000328392 A0A1W2PNR3 127 aa7.41□□□□□ -1.22
SKP1-201ENST00000328392 USP17L15C9J2P7 530 aa7.41□□□□□ -1.22
SKP1-201ENST00000328392 USP17L10C9JJH3 530 aa7.41□□□□□ -1.22
SKP1-201ENST00000328392 USP17L13C9JLJ4 530 aa7.41□□□□□ -1.22
SKP1-201ENST00000328392 USP17L12C9JPN9 530 aa7.41□□□□□ -1.22
SKP1-201ENST00000328392 USP17L11C9JVI0 530 aa7.41□□□□□ -1.22
SKP1-201ENST00000328392 USP17L21D6R901 530 aa7.41□□□□□ -1.22
SKP1-201ENST00000328392 USP17L18D6R9N7 530 aa7.41□□□□□ -1.22
SKP1-201ENST00000328392 USP17L22D6RA61 530 aa7.41□□□□□ -1.22
SKP1-201ENST00000328392 USP17L17D6RBQ6 530 aa7.41□□□□□ -1.22
SKP1-201ENST00000328392 USP17L19D6RCP7 530 aa7.41□□□□□ -1.22
SKP1-201ENST00000328392 USP17L20D6RJB6 530 aa7.41□□□□□ -1.22
SKP1-201ENST00000328392 C21orf2O43822 256 aa7.41□□□□□ -1.22
SKP1-201ENST00000328392 BNIP3LO60238 219 aa7.41□□□□□ -1.22
SKP1-201ENST00000328392 USP17L24Q0WX57 530 aa7.41□□□□□ -1.22
SKP1-201ENST00000328392 ARSJQ5FYB0 599 aaPredicted RBP7.41□□□□□ -1.22
SKP1-201ENST00000328392 EFHC2Q5JST6 749 aa7.41□□□□□ -1.22
SKP1-201ENST00000328392 C1orf216Q8TAB5 229 aa7.41□□□□□ -1.22
SKP1-201ENST00000328392 ABHD17AQ96GS6 310 aa7.41□□□□□ -1.22
SKP1-201ENST00000328392 HCN2Q9UL51 889 aa7.41□□□□□ -1.22
SKP1-201ENST00000328392 ZNF232Q9UNY5 417 aa7.41□□□□□ -1.22
SKP1-201ENST00000328392 IGF1RP08069 1367 aa7.41□□□□□ -1.22
SKP1-201ENST00000328392 M0R2N6 131 aa7.4□□□□□ -1.22
SKP1-201ENST00000328392 EML1O00423 815 aa7.4□□□□□ -1.22
SKP1-201ENST00000328392 MX2P20592 715 aa7.4□□□□□ -1.22
SKP1-201ENST00000328392 SEC13P55735 322 aa7.4□□□□□ -1.22
SKP1-201ENST00000328392 LBRQ14739 615 aaKnown RBP7.4□□□□□ -1.22
SKP1-201ENST00000328392 NBPF1Q3BBV0 1214 aa7.4□□□□□ -1.22
SKP1-201ENST00000328392 CFHR5Q9BXR6 569 aa7.4□□□□□ -1.22
SKP1-201ENST00000328392 ZCCHC2Q9C0B9 1178 aaKnown RBP7.4□□□□□ -1.22
SKP1-201ENST00000328392 NDFIP2Q9NV92 336 aa7.4□□□□□ -1.22
SKP1-201ENST00000328392 ZDHHC3Q9NYG2 299 aa7.4□□□□□ -1.22
SKP1-201ENST00000328392 RBM19Q9Y4C8 960 aaKnown RBP7.4□□□□□ -1.22
SKP1-201ENST00000328392 SERTM1A2A2V5 107 aa7.39□□□□□ -1.23
SKP1-201ENST00000328392 FAM196BA6NMK8 535 aa7.39□□□□□ -1.23
SKP1-201ENST00000328392 TATP17735 454 aaPredicted RBP7.39□□□□□ -1.23
SKP1-201ENST00000328392 ANKMY2Q8IV38 441 aa7.39□□□□□ -1.23
SKP1-201ENST00000328392 SVOPQ8N4V2 548 aa7.39□□□□□ -1.23
SKP1-201ENST00000328392 C7orf43Q8WVR3 580 aa7.39□□□□□ -1.23
SKP1-201ENST00000328392 HCN4Q9Y3Q4 1203 aa7.39□□□□□ -1.23
SKP1-201ENST00000328392 ATAD2Q6PL18 1390 aa7.38□□□□□ -1.23
SKP1-201ENST00000328392 FAM181BA6NEQ2 426 aa7.38□□□□□ -1.23
SKP1-201ENST00000328392 PPP1R12BO60237 982 aaPredicted RBP7.38□□□□□ -1.23
SKP1-201ENST00000328392 ARHGEF15O94989 841 aa7.38□□□□□ -1.23
SKP1-201ENST00000328392 CELA2BP08218 269 aaPredicted RBP7.38□□□□□ -1.23
SKP1-201ENST00000328392 CTBSQ01459 385 aa7.38□□□□□ -1.23
SKP1-201ENST00000328392 BICDL1Q6ZP65 573 aa7.38□□□□□ -1.23
SKP1-201ENST00000328392 SCG3Q8WXD2 468 aaKnown RBP7.38□□□□□ -1.23
SKP1-201ENST00000328392 ACDQ96AP0 544 aa7.38□□□□□ -1.23
SKP1-201ENST00000328392 HINFPQ9BQA5 517 aa7.38□□□□□ -1.23
SKP1-201ENST00000328392 C2CD2LO14523 706 aa7.37□□□□□ -1.23
SKP1-201ENST00000328392 ATXN7O15265 892 aaPredicted RBP7.37□□□□□ -1.23
SKP1-201ENST00000328392 PSMA6P60900 246 aaKnown RBP7.37□□□□□ -1.23
SKP1-201ENST00000328392 NLRP8Q86W28 1048 aa7.37□□□□□ -1.23
SKP1-201ENST00000328392 CHMP7Q8WUX9 453 aaPredicted RBP7.37□□□□□ -1.23
SKP1-201ENST00000328392 ATXN7L1Q9ULK2 861 aaPredicted RBP7.37□□□□□ -1.23
SKP1-201ENST00000328392 ADAMTS8Q9UP79 889 aa7.37□□□□□ -1.23
SKP1-201ENST00000328392 PHF24Q9UPV7 400 aa7.37□□□□□ -1.23
SKP1-201ENST00000328392 PCDHGC4Q9Y5F7 938 aa7.37□□□□□ -1.23
SKP1-201ENST00000328392 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.36□□□□□ -1.23
SKP1-201ENST00000328392 DCDC2BA2VCK2 349 aa7.36□□□□□ -1.23
SKP1-201ENST00000328392 FGFR3P22607 806 aa7.36□□□□□ -1.23
SKP1-201ENST00000328392 SRPK2P78362 688 aaKnown RBP7.36□□□□□ -1.23
SKP1-201ENST00000328392 LRRC69Q6ZNQ3 347 aa7.36□□□□□ -1.23
SKP1-201ENST00000328392 TNP2Q05952 138 aa7.35□□□□□ -1.23
SKP1-201ENST00000328392 FIGNL1Q6PIW4 674 aa7.35□□□□□ -1.23
SKP1-201ENST00000328392 POTEAQ6S8J7 498 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms