RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 CCDC160A6NGH7 325 aa14.68□□□□□ -0.06
USP38-201ENST00000307017 GNL3LQ9NVN8 582 aaKnown RBP14.68□□□□□ -0.06
USP38-201ENST00000307017 ARID5AQ03989 594 aa14.68□□□□□ -0.06
USP38-201ENST00000307017 HGSO14964 777 aaPredicted RBP14.68□□□□□ -0.06
USP38-201ENST00000307017 AFMP43652 599 aa14.68□□□□□ -0.06
USP38-201ENST00000307017 FAM69CQ0P6D2 419 aa14.68□□□□□ -0.06
USP38-201ENST00000307017 RSPH14Q9UHP6 348 aa14.68□□□□□ -0.06
USP38-201ENST00000307017 TCERG1LQ5VWI1 586 aa14.67□□□□□ -0.06
USP38-201ENST00000307017 CNNM3Q8NE01 707 aa14.67□□□□□ -0.06
USP38-201ENST00000307017 GAS2L2Q8NHY3 880 aa14.67□□□□□ -0.06
USP38-201ENST00000307017 GPTP24298 496 aa14.67□□□□□ -0.06
USP38-201ENST00000307017 IMMTQ16891 758 aaKnown RBP14.67□□□□□ -0.06
USP38-201ENST00000307017 CEP135Q66GS9 1140 aa14.67□□□□□ -0.06
USP38-201ENST00000307017 KIF18AQ8NI77 898 aa14.67□□□□□ -0.06
USP38-201ENST00000307017 SLC26A8Q96RN1 970 aa14.67□□□□□ -0.06
USP38-201ENST00000307017 AFAP1Q8N556 730 aa14.67□□□□□ -0.06
USP38-201ENST00000307017 CNPY2Q9Y2B0 182 aa14.67□□□□□ -0.06
USP38-201ENST00000307017 FLIIQ13045 1269 aa14.67□□□□□ -0.06
USP38-201ENST00000307017 DPH6Q7L8W6 267 aa14.66□□□□□ -0.06
USP38-201ENST00000307017 PDS5BQ9NTI5 1447 aa14.66□□□□□ -0.06
USP38-201ENST00000307017 TATP17735 454 aaPredicted RBP14.66□□□□□ -0.06
USP38-201ENST00000307017 INCENPQ9NQS7 918 aa14.66□□□□□ -0.06
USP38-201ENST00000307017 HCLS1P14317 486 aaPredicted RBP14.66□□□□□ -0.06
USP38-201ENST00000307017 CCT4P50991 539 aaKnown RBP14.66□□□□□ -0.06
USP38-201ENST00000307017 MCM6Q14566 821 aa14.66□□□□□ -0.06
USP38-201ENST00000307017 LARP1Q6PKG0 1096 aaKnown RBP14.66□□□□□ -0.06
USP38-201ENST00000307017 CHST3Q7LGC8 479 aa14.66□□□□□ -0.06
USP38-201ENST00000307017 LUC7LQ9NQ29 371 aaKnown RBP14.66□□□□□ -0.06
USP38-201ENST00000307017 PHACTR2O75167 634 aa14.66□□□□□ -0.06
USP38-201ENST00000307017 ZSCAN23Q3MJ62 389 aa14.66□□□□□ -0.06
USP38-201ENST00000307017 ANXA1P04083 346 aa14.65□□□□□ -0.06
USP38-201ENST00000307017 UIMC1Q96RL1 719 aa14.65□□□□□ -0.06
USP38-201ENST00000307017 COMMD10Q9Y6G5 202 aa14.65□□□□□ -0.06
USP38-201ENST00000307017 IGHDP01880 384 aa14.65□□□□□ -0.06
USP38-201ENST00000307017 CA8P35219 290 aa14.65□□□□□ -0.06
USP38-201ENST00000307017 IQCEQ6IPM2 695 aa14.65□□□□□ -0.06
USP38-201ENST00000307017 MIA2Q96PC5 1412 aa14.65□□□□□ -0.06
USP38-201ENST00000307017 VGLL3A8MV65 326 aa14.65□□□□□ -0.06
USP38-201ENST00000307017 KSR1Q8IVT5 923 aa14.65□□□□□ -0.06
USP38-201ENST00000307017 C8orf76Q96K31 380 aa14.65□□□□□ -0.06
USP38-201ENST00000307017 MKNK2Q9HBH9 465 aa14.65□□□□□ -0.06
USP38-201ENST00000307017 GOLGA8BA8MQT2 603 aa14.65□□□□□ -0.06
USP38-201ENST00000307017 CCDC91Q7Z6B0 441 aa14.65□□□□□ -0.06
USP38-201ENST00000307017 CCDC12Q8WUD4 166 aaPredicted RBP14.65□□□□□ -0.06
USP38-201ENST00000307017 ANKIB1Q9P2G1 1089 aa14.65□□□□□ -0.06
USP38-201ENST00000307017 CTNNA2P26232 953 aa14.64□□□□□ -0.07
USP38-201ENST00000307017 SNW1Q13573 536 aaKnown RBP14.64□□□□□ -0.07
USP38-201ENST00000307017 MX1P20591 662 aa14.64□□□□□ -0.07
USP38-201ENST00000307017 BMP2KQ9NSY1 1161 aaPredicted RBP14.64□□□□□ -0.07
USP38-201ENST00000307017 RAB11FIP3O75154 756 aa14.64□□□□□ -0.07
USP38-201ENST00000307017 MNAT1P51948 309 aa14.64□□□□□ -0.07
USP38-201ENST00000307017 MPRIPQ6WCQ1 1025 aa14.64□□□□□ -0.07
USP38-201ENST00000307017 GPRASP1Q5JY77 1395 aa14.64□□□□□ -0.07
USP38-201ENST00000307017 MTIF2P46199 727 aaKnown RBP14.64□□□□□ -0.07
USP38-201ENST00000307017 IQSEC3Q9UPP2 1182 aaPredicted RBP14.64□□□□□ -0.07
USP38-201ENST00000307017 PLIN2Q99541 437 aa14.63□□□□□ -0.07
USP38-201ENST00000307017 ATP5J2-PTCD1G3V325 749 aa14.63□□□□□ -0.07
USP38-201ENST00000307017 NLRP5P59047 1200 aa14.63□□□□□ -0.07
USP38-201ENST00000307017 SEC63Q9UGP8 760 aaKnown RBP14.63□□□□□ -0.07
USP38-201ENST00000307017 FAM83GA6ND36 823 aa14.63□□□□□ -0.07
USP38-201ENST00000307017 DUSP27Q5VZP5 1158 aa14.63□□□□□ -0.07
USP38-201ENST00000307017 GTF2A1P52655 376 aaPredicted RBP14.63□□□□□ -0.07
USP38-201ENST00000307017 KARSQ15046 597 aaKnown RBP14.63□□□□□ -0.07
USP38-201ENST00000307017 WAPLQ7Z5K2 1190 aa14.63□□□□□ -0.07
USP38-201ENST00000307017 PNISRQ8TF01 805 aaKnown RBP14.63□□□□□ -0.07
USP38-201ENST00000307017 SMARCC1Q92922 1105 aaPredicted RBP14.63□□□□□ -0.07
USP38-201ENST00000307017 ARL1P40616 181 aaPredicted RBP14.62□□□□□ -0.07
USP38-201ENST00000307017 ARHGAP5Q13017 1502 aa14.62□□□□□ -0.07
USP38-201ENST00000307017 MICU3Q86XE3 530 aa14.62□□□□□ -0.07
USP38-201ENST00000307017 MRRFQ96E11 262 aaKnown RBP14.62□□□□□ -0.07
USP38-201ENST00000307017 PLEKHA4Q9H4M7 779 aa14.62□□□□□ -0.07
USP38-201ENST00000307017 PRC1O43663 620 aa14.62□□□□□ -0.07
USP38-201ENST00000307017 PPP6R1Q9UPN7 881 aa14.62□□□□□ -0.07
USP38-201ENST00000307017 TTC12Q9H892 705 aaPredicted RBP14.62□□□□□ -0.07
USP38-201ENST00000307017 IFIT1P09914 478 aaKnown RBP14.62□□□□□ -0.07
USP38-201ENST00000307017 PDE3AQ14432 1141 aa14.62□□□□□ -0.07
USP38-201ENST00000307017 SMG6Q86US8 1419 aaKnown RBP14.62□□□□□ -0.07
USP38-201ENST00000307017 GOLIM4O00461 696 aa14.61□□□□□ -0.07
USP38-201ENST00000307017 MARCKSP29966 332 aaPredicted RBP14.61□□□□□ -0.07
USP38-201ENST00000307017 IDEP14735 1019 aa14.61□□□□□ -0.07
USP38-201ENST00000307017 GNG11P61952 73 aa14.61□□□□□ -0.07
USP38-201ENST00000307017 ANO6Q4KMQ2 910 aa14.61□□□□□ -0.07
USP38-201ENST00000307017 CRACR2BQ8N4Y2 399 aaPredicted RBP14.61□□□□□ -0.07
USP38-201ENST00000307017 SSRP1Q08945 709 aaKnown RBP14.61□□□□□ -0.07
USP38-201ENST00000307017 TAF7Q15545 349 aaPredicted RBP14.61□□□□□ -0.07
USP38-201ENST00000307017 CEP126Q9P2H0 1117 aa14.61□□□□□ -0.07
USP38-201ENST00000307017 ANO10Q9NW15 660 aa14.61□□□□□ -0.07
USP38-201ENST00000307017 SBNO2Q9Y2G9 1366 aa14.61□□□□□ -0.07
USP38-201ENST00000307017 PROSER2Q86WR7 435 aaPredicted RBP14.6□□□□□ -0.07
USP38-201ENST00000307017 ZNF354CQ86Y25 554 aa14.6□□□□□ -0.07
USP38-201ENST00000307017 C16orf71Q8IYS4 520 aaPredicted RBP14.6□□□□□ -0.07
USP38-201ENST00000307017 SSH1Q8WYL5 1049 aa14.6□□□□□ -0.07
USP38-201ENST00000307017 SLC12A7Q9Y666 1083 aa14.6□□□□□ -0.07
USP38-201ENST00000307017 TBC1D9Q6ZT07 1266 aa14.6□□□□□ -0.07
USP38-201ENST00000307017 MICALL1Q8N3F8 863 aa14.6□□□□□ -0.07
USP38-201ENST00000307017 CDKL5O76039 1030 aa14.6□□□□□ -0.07
USP38-201ENST00000307017 SELENOSQ9BQE4 189 aa14.6□□□□□ -0.07
USP38-201ENST00000307017 SLC26A6Q9BXS9 759 aa14.6□□□□□ -0.07
USP38-201ENST00000307017 MXRA7P84157 204 aa14.6□□□□□ -0.07
USP38-201ENST00000307017 GRM1Q13255 1194 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms