RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 SCP2P22307 547 aa13.59□□□□□ -0.23
SNIP1-201ENST00000296215 TMF1P82094 1093 aa13.59□□□□□ -0.23
SNIP1-201ENST00000296215 FBXO38Q6PIJ6 1188 aa13.59□□□□□ -0.23
SNIP1-201ENST00000296215 JMYQ8N9B5 988 aa13.59□□□□□ -0.23
SNIP1-201ENST00000296215 DDX27Q96GQ7 796 aaKnown RBP13.59□□□□□ -0.23
SNIP1-201ENST00000296215 RNF123Q5XPI4 1314 aa13.58□□□□□ -0.23
SNIP1-201ENST00000296215 BICRAQ9NZM4 1560 aa13.58□□□□□ -0.23
SNIP1-201ENST00000296215 SEPT7Q16181 437 aaKnown RBP13.58□□□□□ -0.24
SNIP1-201ENST00000296215 NBPF10Q6P3W6 841 aaKnown RBP13.58□□□□□ -0.24
SNIP1-201ENST00000296215 CEP57L1Q8IYX8 460 aa13.58□□□□□ -0.24
SNIP1-201ENST00000296215 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.58□□□□□ -0.24
SNIP1-201ENST00000296215 TPX2Q9ULW0 747 aaKnown RBP13.58□□□□□ -0.24
SNIP1-201ENST00000296215 FAM200AQ8TCP9 573 aa13.58□□□□□ -0.24
SNIP1-201ENST00000296215 SGSM3Q96HU1 749 aa13.58□□□□□ -0.24
SNIP1-201ENST00000296215 WDR97A6NE52 1622 aa13.58□□□□□ -0.24
SNIP1-201ENST00000296215 SH2D4BQ5SQS7 431 aa13.58□□□□□ -0.24
SNIP1-201ENST00000296215 CTNNBL1Q8WYA6 563 aaPredicted RBP13.58□□□□□ -0.24
SNIP1-201ENST00000296215 DESP17661 470 aa13.57□□□□□ -0.24
SNIP1-201ENST00000296215 KRT85P78386 507 aa13.57□□□□□ -0.24
SNIP1-201ENST00000296215 ANKRD7Q92527 254 aa13.57□□□□□ -0.24
SNIP1-201ENST00000296215 MX1P20591 662 aa13.57□□□□□ -0.24
SNIP1-201ENST00000296215 ZNF165P49910 485 aa13.57□□□□□ -0.24
SNIP1-201ENST00000296215 MXRA7P84157 204 aa13.57□□□□□ -0.24
SNIP1-201ENST00000296215 RABEP2Q9H5N1 569 aa13.57□□□□□ -0.24
SNIP1-201ENST00000296215 IGHDP01880 384 aa13.57□□□□□ -0.24
SNIP1-201ENST00000296215 SESN3P58005 492 aa13.57□□□□□ -0.24
SNIP1-201ENST00000296215 HSP90AB2PQ58FF8 381 aa13.57□□□□□ -0.24
SNIP1-201ENST00000296215 SMARCE1Q969G3 411 aa13.57□□□□□ -0.24
SNIP1-201ENST00000296215 UPF3BQ9BZI7 483 aaKnown RBP13.57□□□□□ -0.24
SNIP1-201ENST00000296215 ENO4A6NNW6 628 aa13.56□□□□□ -0.24
SNIP1-201ENST00000296215 ZEB2O60315 1214 aa13.56□□□□□ -0.24
SNIP1-201ENST00000296215 CDKL5O76039 1030 aa13.56□□□□□ -0.24
SNIP1-201ENST00000296215 PCK1P35558 622 aa13.56□□□□□ -0.24
SNIP1-201ENST00000296215 SNCBQ16143 134 aa13.56□□□□□ -0.24
SNIP1-201ENST00000296215 ATP8B1O43520 1251 aa13.56□□□□□ -0.24
SNIP1-201ENST00000296215 CREB3O43889 395 aa13.56□□□□□ -0.24
SNIP1-201ENST00000296215 GCFC2P16383 781 aaKnown RBP13.56□□□□□ -0.24
SNIP1-201ENST00000296215 E2F5Q15329 346 aa13.56□□□□□ -0.24
SNIP1-201ENST00000296215 AMOTQ4VCS5 1084 aa13.56□□□□□ -0.24
SNIP1-201ENST00000296215 ZNF365Q70YC5 407 aa13.56□□□□□ -0.24
SNIP1-201ENST00000296215 PAF1Q8N7H5 531 aa13.56□□□□□ -0.24
SNIP1-201ENST00000296215 RILPL2Q969X0 211 aa13.56□□□□□ -0.24
SNIP1-201ENST00000296215 PUS7Q96PZ0 661 aaKnown RBP13.56□□□□□ -0.24
SNIP1-201ENST00000296215 PNMA6AP0CW24 399 aaPredicted RBP13.56□□□□□ -0.24
SNIP1-201ENST00000296215 PDE6BP35913 854 aa13.56□□□□□ -0.24
SNIP1-201ENST00000296215 GIGYF2Q6Y7W6 1299 aaKnown RBP13.56□□□□□ -0.24
SNIP1-201ENST00000296215 CKAP2LQ8IYA6 745 aa13.56□□□□□ -0.24
SNIP1-201ENST00000296215 ARL10Q8N8L6 244 aa13.56□□□□□ -0.24
SNIP1-201ENST00000296215 KIAA1524Q8TCG1 905 aa13.56□□□□□ -0.24
SNIP1-201ENST00000296215 BAIAP2L1Q9UHR4 511 aa13.56□□□□□ -0.24
SNIP1-201ENST00000296215 KIF5CO60282 957 aa13.55□□□□□ -0.24
SNIP1-201ENST00000296215 GAS2L2Q8NHY3 880 aa13.55□□□□□ -0.24
SNIP1-201ENST00000296215 TSC22D3Q99576 134 aa13.55□□□□□ -0.24
SNIP1-201ENST00000296215 PPP2R3AQ06190 1150 aa13.55□□□□□ -0.24
SNIP1-201ENST00000296215 ITFG2Q969R8 447 aa13.55□□□□□ -0.24
SNIP1-201ENST00000296215 YIPF3Q9GZM5 350 aa13.55□□□□□ -0.24
SNIP1-201ENST00000296215 PYCARDQ9ULZ3 195 aa13.55□□□□□ -0.24
SNIP1-201ENST00000296215 ST7Q9NRC1 585 aa13.55□□□□□ -0.24
SNIP1-201ENST00000296215 IBTKQ9P2D0 1353 aaPredicted RBP13.55□□□□□ -0.24
SNIP1-201ENST00000296215 TXLNAP40222 546 aa13.54□□□□□ -0.24
SNIP1-201ENST00000296215 NOP2P46087 812 aaKnown RBP13.54□□□□□ -0.24
SNIP1-201ENST00000296215 CCDC30Q5VVM6 783 aa13.54□□□□□ -0.24
SNIP1-201ENST00000296215 KLHL23Q8NBE8 558 aa13.54□□□□□ -0.24
SNIP1-201ENST00000296215 POLKQ9UBT6 870 aa13.54□□□□□ -0.24
SNIP1-201ENST00000296215 TULP2O00295 520 aa13.54□□□□□ -0.24
SNIP1-201ENST00000296215 KMT5BQ4FZB7 885 aa13.54□□□□□ -0.24
SNIP1-201ENST00000296215 IQCEQ6IPM2 695 aa13.54□□□□□ -0.24
SNIP1-201ENST00000296215 PDLIM2Q96JY6 352 aa13.54□□□□□ -0.24
SNIP1-201ENST00000296215 RIPOR2Q9Y4F9 1068 aa13.54□□□□□ -0.24
SNIP1-201ENST00000296215 LRRD1A4D1F6 860 aa13.54□□□□□ -0.24
SNIP1-201ENST00000296215 UBE2HP62256 183 aa13.54□□□□□ -0.24
SNIP1-201ENST00000296215 CCDC148Q8NFR7 591 aa13.54□□□□□ -0.24
SNIP1-201ENST00000296215 ZCRB1Q8TBF4 217 aaKnown RBP13.54□□□□□ -0.24
SNIP1-201ENST00000296215 CCDC12Q8WUD4 166 aaPredicted RBP13.54□□□□□ -0.24
SNIP1-201ENST00000296215 CBFA2T2O43439 604 aa13.54□□□□□ -0.24
SNIP1-201ENST00000296215 SNUPNO95149 360 aaKnown RBP13.54□□□□□ -0.24
SNIP1-201ENST00000296215 CCT5P48643 541 aa13.54□□□□□ -0.24
SNIP1-201ENST00000296215 SH3BGRP55822 239 aaPredicted RBP13.54□□□□□ -0.24
SNIP1-201ENST00000296215 CARD6Q9BX69 1037 aa13.54□□□□□ -0.24
SNIP1-201ENST00000296215 PPP1R12CQ9BZL4 782 aa13.54□□□□□ -0.24
SNIP1-201ENST00000296215 ATG3Q9NT62 314 aa13.54□□□□□ -0.24
SNIP1-201ENST00000296215 ADAM21Q9UKJ8 722 aa13.54□□□□□ -0.24
SNIP1-201ENST00000296215 CCDC69A6NI79 296 aa13.53□□□□□ -0.24
SNIP1-201ENST00000296215 PRDM16Q9HAZ2 1276 aa13.53□□□□□ -0.24
SNIP1-201ENST00000296215 LMBRD1Q9NUN5 540 aa13.53□□□□□ -0.24
SNIP1-201ENST00000296215 FAM184BQ9ULE4 1060 aa13.53□□□□□ -0.24
SNIP1-201ENST00000296215 ANKRD30AQ9BXX3 1397 aa13.53□□□□□ -0.24
SNIP1-201ENST00000296215 HHATQ5VTY9 493 aa13.53□□□□□ -0.24
SNIP1-201ENST00000296215 TMEM63CQ9P1W3 806 aa13.53□□□□□ -0.24
SNIP1-201ENST00000296215 CEBPZQ03701 1054 aaKnown RBP13.53□□□□□ -0.24
SNIP1-201ENST00000296215 CCDC150Q8NCX0 1101 aa13.53□□□□□ -0.24
SNIP1-201ENST00000296215 DDX12PQ92771 950 aa13.53□□□□□ -0.24
SNIP1-201ENST00000296215 VCXQ9H320 206 aa13.53□□□□□ -0.24
SNIP1-201ENST00000296215 ZFYP08048 801 aaPredicted RBP13.52□□□□□ -0.24
SNIP1-201ENST00000296215 DIXDC1Q155Q3 683 aa13.52□□□□□ -0.25
SNIP1-201ENST00000296215 ACBD5Q5T8D3 534 aaPredicted RBP13.52□□□□□ -0.25
SNIP1-201ENST00000296215 OLFM4Q6UX06 510 aa13.52□□□□□ -0.25
SNIP1-201ENST00000296215 TBC1D22AQ8WUA7 517 aa13.52□□□□□ -0.25
SNIP1-201ENST00000296215 ZBTB10Q96DT7 871 aa13.52□□□□□ -0.25
SNIP1-201ENST00000296215 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.52□□□□□ -0.257e-7■■■□□ 19
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms