RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 TSHZ3Q63HK5 1081 aa20.22■□□□□ 0.83
CDCP1-201ENST00000296129 CNKSR2Q8WXI2 1034 aa20.22■□□□□ 0.83
CDCP1-201ENST00000296129 CBFA2T2O43439 604 aa20.22■□□□□ 0.83
CDCP1-201ENST00000296129 PPP1R42Q7Z4L9 355 aa20.22■□□□□ 0.83
CDCP1-201ENST00000296129 EVI5LQ96CN4 794 aa20.22■□□□□ 0.83
CDCP1-201ENST00000296129 MAP3K12Q12852 859 aa20.22■□□□□ 0.83
CDCP1-201ENST00000296129 TBC1D2Q9BYX2 928 aa20.22■□□□□ 0.83
CDCP1-201ENST00000296129 MPHOSPH10O00566 681 aaKnown RBP20.21■□□□□ 0.83
CDCP1-201ENST00000296129 ANXA1P04083 346 aa20.21■□□□□ 0.83
CDCP1-201ENST00000296129 SH2B1Q9NRF2 756 aaPredicted RBP20.21■□□□□ 0.83
CDCP1-201ENST00000296129 PATL2C9JE40 543 aaKnown RBP20.21■□□□□ 0.83
CDCP1-201ENST00000296129 MAP3K11Q16584 847 aa20.21■□□□□ 0.83
CDCP1-201ENST00000296129 SSBP05455 408 aaKnown RBP eCLIP20.2■□□□□ 0.82
CDCP1-201ENST00000296129 ECHDC1Q9NTX5 307 aa20.2■□□□□ 0.82
CDCP1-201ENST00000296129 CWC25Q9NXE8 425 aaPredicted RBP20.2■□□□□ 0.82
CDCP1-201ENST00000296129 SYCP1Q15431 976 aa20.2■□□□□ 0.82
CDCP1-201ENST00000296129 PARD3Q8TEW0 1356 aa20.2■□□□□ 0.82
CDCP1-201ENST00000296129 POLR3DP05423 398 aaPredicted RBP20.2■□□□□ 0.82
CDCP1-201ENST00000296129 CDR1P51861 262 aa20.2■□□□□ 0.82
CDCP1-201ENST00000296129 LARP6Q9BRS8 491 aaKnown RBP20.2■□□□□ 0.82
CDCP1-201ENST00000296129 PLEKHH1Q9ULM0 1364 aa20.2■□□□□ 0.82
CDCP1-201ENST00000296129 BMP2KLQ5H9B9 411 aa20.2■□□□□ 0.82
CDCP1-201ENST00000296129 TTC22Q5TAA0 569 aa20.19■□□□□ 0.82
CDCP1-201ENST00000296129 IL27Q8NEV9 243 aa20.19■□□□□ 0.82
CDCP1-201ENST00000296129 CEP131Q9UPN4 1083 aa20.19■□□□□ 0.82
CDCP1-201ENST00000296129 DHX8Q14562 1220 aaKnown RBP20.19■□□□□ 0.82
CDCP1-201ENST00000296129 DZIP1Q86YF9 867 aaKnown RBP20.19■□□□□ 0.82
CDCP1-201ENST00000296129 JARID2Q92833 1246 aaPredicted RBP20.19■□□□□ 0.82
CDCP1-201ENST00000296129 HMGB1P09429 215 aaKnown RBP20.19■□□□□ 0.82
CDCP1-201ENST00000296129 SSFA2P28290 1259 aa20.19■□□□□ 0.82
CDCP1-201ENST00000296129 ZRANB1Q9UGI0 708 aa20.19■□□□□ 0.82
CDCP1-201ENST00000296129 ZNF213O14771 459 aa20.19■□□□□ 0.82
CDCP1-201ENST00000296129 UBE3BQ7Z3V4 1068 aa20.19■□□□□ 0.82
CDCP1-201ENST00000296129 LIMCH1Q9UPQ0 1083 aa20.18■□□□□ 0.82
CDCP1-201ENST00000296129 GOLIM4O00461 696 aa20.18■□□□□ 0.82
CDCP1-201ENST00000296129 CHPF2Q9P2E5 772 aa20.18■□□□□ 0.82
CDCP1-201ENST00000296129 GUCY1B3Q02153 619 aa20.18■□□□□ 0.82
CDCP1-201ENST00000296129 DEF6Q9H4E7 631 aa20.18■□□□□ 0.82
CDCP1-201ENST00000296129 SNRPA1P09661 255 aaKnown RBP20.18■□□□□ 0.82
CDCP1-201ENST00000296129 MKNK2Q9HBH9 465 aa20.18■□□□□ 0.82
CDCP1-201ENST00000296129 ERCC4Q92889 916 aaPredicted RBP20.17■□□□□ 0.82
CDCP1-201ENST00000296129 ZNF76P36508 570 aa20.17■□□□□ 0.82
CDCP1-201ENST00000296129 TEX13AQ9BXU3 409 aaPredicted RBP20.17■□□□□ 0.82
CDCP1-201ENST00000296129 ZNF287Q9HBT7 754 aa20.17■□□□□ 0.82
CDCP1-201ENST00000296129 HMGN5P82970 282 aaKnown RBP20.16■□□□□ 0.82
CDCP1-201ENST00000296129 NUCB1Q02818 461 aa20.16■□□□□ 0.82
CDCP1-201ENST00000296129 EIF4A2Q14240 407 aaKnown RBP20.16■□□□□ 0.82
CDCP1-201ENST00000296129 CADPS2Q86UW7 1296 aa20.16■□□□□ 0.82
CDCP1-201ENST00000296129 ARHGAP45Q92619 1136 aa20.16■□□□□ 0.82
CDCP1-201ENST00000296129 NGLY1Q96IV0 654 aa20.16■□□□□ 0.82
CDCP1-201ENST00000296129 C8orf76Q96K31 380 aa20.16■□□□□ 0.82
CDCP1-201ENST00000296129 KIF21AQ7Z4S6 1674 aa20.16■□□□□ 0.82
CDCP1-201ENST00000296129 SMTNL1A8MU46 457 aa20.16■□□□□ 0.82
CDCP1-201ENST00000296129 SHANK2Q9UPX8 1470 aa20.15■□□□□ 0.82
CDCP1-201ENST00000296129 RANBP6O60518 1105 aaKnown RBP20.15■□□□□ 0.82
CDCP1-201ENST00000296129 MEIS3Q99687 375 aa20.15■□□□□ 0.82
CDCP1-201ENST00000296129 BMP2KQ9NSY1 1161 aaPredicted RBP20.15■□□□□ 0.82
CDCP1-201ENST00000296129 FAM177A1Q8N128 213 aaPredicted RBP20.15■□□□□ 0.82
CDCP1-201ENST00000296129 SLC12A7Q9Y666 1083 aa20.15■□□□□ 0.82
CDCP1-201ENST00000296129 ABCC1P33527 1531 aa20.15■□□□□ 0.82
CDCP1-201ENST00000296129 HDAC1Q13547 482 aaPredicted RBP20.15■□□□□ 0.82
CDCP1-201ENST00000296129 MRPL50Q8N5N7 158 aaKnown RBP20.15■□□□□ 0.82
CDCP1-201ENST00000296129 SEC63Q9UGP8 760 aaKnown RBP20.15■□□□□ 0.82
CDCP1-201ENST00000296129 C8orf58Q8NAV2 365 aa20.15■□□□□ 0.82
CDCP1-201ENST00000296129 TNPO1Q92973 898 aaKnown RBP20.15■□□□□ 0.82
CDCP1-201ENST00000296129 TMOD2Q9NZR1 351 aa20.14■□□□□ 0.82
CDCP1-201ENST00000296129 ABCC10Q5T3U5 1492 aa20.14■□□□□ 0.82
CDCP1-201ENST00000296129 CCT2P78371 535 aaKnown RBP20.14■□□□□ 0.81
CDCP1-201ENST00000296129 FILIP1Q7Z7B0 1213 aa20.14■□□□□ 0.81
CDCP1-201ENST00000296129 RPGRQ92834 1020 aaKnown RBP20.14■□□□□ 0.81
CDCP1-201ENST00000296129 SNRKQ9NRH2 765 aa20.14■□□□□ 0.81
CDCP1-201ENST00000296129 CCDC82Q8N4S0 544 aa20.14■□□□□ 0.81
CDCP1-201ENST00000296129 EIF4G3O43432 1585 aaKnown RBP20.14■□□□□ 0.81
CDCP1-201ENST00000296129 POLR3AO14802 1390 aaPredicted RBP20.14■□□□□ 0.81
CDCP1-201ENST00000296129 GOLGA8BA8MQT2 603 aa20.14■□□□□ 0.81
CDCP1-201ENST00000296129 LDHAL6AQ6ZMR3 332 aa20.14■□□□□ 0.81
CDCP1-201ENST00000296129 WWC2Q6AWC2 1192 aa20.13■□□□□ 0.81
CDCP1-201ENST00000296129 POLKQ9UBT6 870 aa20.13■□□□□ 0.81
CDCP1-201ENST00000296129 CCDC183Q5T5S1 534 aa20.13■□□□□ 0.81
CDCP1-201ENST00000296129 SCAND2PQ9GZW5 306 aaPredicted RBP20.13■□□□□ 0.81
CDCP1-201ENST00000296129 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.13■□□□□ 0.81
CDCP1-201ENST00000296129 CRACR2BQ8N4Y2 399 aaPredicted RBP20.13■□□□□ 0.81
CDCP1-201ENST00000296129 MSH6P52701 1360 aa20.13■□□□□ 0.81
CDCP1-201ENST00000296129 CCDC196A0A1B0GTZ2 297 aa20.13■□□□□ 0.81
CDCP1-201ENST00000296129 ANKRD13DQ6ZTN6 518 aa20.13■□□□□ 0.81
CDCP1-201ENST00000296129 MYO6Q9UM54 1294 aa20.13■□□□□ 0.81
CDCP1-201ENST00000296129 MTERF4Q7Z6M4 381 aaKnown RBP20.12■□□□□ 0.81
CDCP1-201ENST00000296129 SKIDA1Q1XH10 827 aa20.12■□□□□ 0.81
CDCP1-201ENST00000296129 TESK2Q96S53 571 aa20.12■□□□□ 0.81
CDCP1-201ENST00000296129 PCDHB15Q9Y5E8 787 aa20.12■□□□□ 0.81
CDCP1-201ENST00000296129 GOLGA8AA7E2F4 631 aa20.12■□□□□ 0.81
CDCP1-201ENST00000296129 RBM10P98175 930 aaKnown RBP20.12■□□□□ 0.81
CDCP1-201ENST00000296129 IFIT3O14879 490 aaKnown RBP20.12■□□□□ 0.81
CDCP1-201ENST00000296129 HMGB2P26583 209 aaKnown RBP20.12■□□□□ 0.81
CDCP1-201ENST00000296129 GJB2P29033 226 aa20.12■□□□□ 0.81
CDCP1-201ENST00000296129 CCDC112Q8NEF3 446 aa20.12■□□□□ 0.81
CDCP1-201ENST00000296129 CTCFLQ8NI51 663 aaPredicted RBP20.12■□□□□ 0.81
CDCP1-201ENST00000296129 RHPN1Q8TCX5 695 aa20.12■□□□□ 0.81
CDCP1-201ENST00000296129 SSRP1Q08945 709 aaKnown RBP20.11■□□□□ 0.81
CDCP1-201ENST00000296129 TTF1Q15361 905 aaPredicted RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms