RNA–Protein interactions for RNA: ENST00000164640.8

PDZD4-201, Transcript of PDZ domain containing 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDZD4, Length 3,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-201ENST00000164640 SKILP12757 684 aa17.86■□□□□ 0.45
PDZD4-201ENST00000164640 IRX5P78411 483 aaPredicted RBP17.86■□□□□ 0.45
PDZD4-201ENST00000164640 KIF18AQ8NI77 898 aa17.86■□□□□ 0.45
PDZD4-201ENST00000164640 FMNL2Q96PY5 1086 aa17.86■□□□□ 0.45
PDZD4-201ENST00000164640 LRRFIP2Q9Y608 721 aaKnown RBP17.86■□□□□ 0.45
PDZD4-201ENST00000164640 CERS3Q8IU89 383 aa17.85■□□□□ 0.45
PDZD4-201ENST00000164640 CDC42BPBQ9Y5S2 1711 aa17.85■□□□□ 0.45
PDZD4-201ENST00000164640 ZKSCAN1P17029 563 aaPredicted RBP17.85■□□□□ 0.45
PDZD4-201ENST00000164640 TERF2Q15554 542 aa17.85■□□□□ 0.45
PDZD4-201ENST00000164640 ADGRL1O94910 1474 aa17.85■□□□□ 0.45
PDZD4-201ENST00000164640 PNMA6EA0A0J9YXQ4 647 aa17.85■□□□□ 0.45
PDZD4-201ENST00000164640 GNL2Q13823 731 aaKnown RBP17.85■□□□□ 0.45
PDZD4-201ENST00000164640 CYP46A1Q9Y6A2 500 aa17.85■□□□□ 0.45
PDZD4-201ENST00000164640 H3BQV1 296 aa17.84■□□□□ 0.45
PDZD4-201ENST00000164640 IFFO2Q5TF58 517 aa17.84■□□□□ 0.45
PDZD4-201ENST00000164640 PTCH1Q13635 1447 aa17.84■□□□□ 0.45
PDZD4-201ENST00000164640 CCT4P50991 539 aaKnown RBP17.84■□□□□ 0.45
PDZD4-201ENST00000164640 CACTINQ8WUQ7 758 aaKnown RBP17.84■□□□□ 0.45
PDZD4-201ENST00000164640 CFAP65Q6ZU64 1925 aaKnown RBP17.84■□□□□ 0.45
PDZD4-201ENST00000164640 CTIFO43310 598 aaKnown RBP17.84■□□□□ 0.45
PDZD4-201ENST00000164640 HSP90B1P14625 803 aaKnown RBP17.84■□□□□ 0.45
PDZD4-201ENST00000164640 ARID5BQ14865 1188 aa17.84■□□□□ 0.45
PDZD4-201ENST00000164640 CNTROBQ8N137 903 aa17.84■□□□□ 0.45
PDZD4-201ENST00000164640 SNX14Q9Y5W7 946 aa17.84■□□□□ 0.45
PDZD4-201ENST00000164640 UBTFL1P0CB47 393 aaPredicted RBP17.83■□□□□ 0.45
PDZD4-201ENST00000164640 RASEFQ8IZ41 740 aa17.83■□□□□ 0.44
PDZD4-201ENST00000164640 CCAR2Q8N163 923 aaKnown RBP17.83■□□□□ 0.44
PDZD4-201ENST00000164640 GNAI3P08754 354 aa17.83■□□□□ 0.44
PDZD4-201ENST00000164640 SLFN14P0C7P3 912 aa17.83■□□□□ 0.44
PDZD4-201ENST00000164640 ZNF75DP51815 510 aa17.83■□□□□ 0.44
PDZD4-201ENST00000164640 TEX35Q5T0J7 233 aa17.83■□□□□ 0.44
PDZD4-201ENST00000164640 RUFY3Q7L099 469 aa17.83■□□□□ 0.44
PDZD4-201ENST00000164640 PREX2Q70Z35 1606 aa17.82■□□□□ 0.44
PDZD4-201ENST00000164640 NRDCO43847 1150 aa17.82■□□□□ 0.44
PDZD4-201ENST00000164640 LARGE1O95461 756 aa17.82■□□□□ 0.44
PDZD4-201ENST00000164640 FAM177A1Q8N128 213 aaPredicted RBP17.82■□□□□ 0.44
PDZD4-201ENST00000164640 USP16Q9Y5T5 823 aa17.82■□□□□ 0.44
PDZD4-201ENST00000164640 MED14O60244 1454 aa17.82■□□□□ 0.44
PDZD4-201ENST00000164640 MRVI1Q9Y6F6 885 aa17.82■□□□□ 0.44
PDZD4-201ENST00000164640 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.82■□□□□ 0.44
PDZD4-201ENST00000164640 KMT5BQ4FZB7 885 aa17.82■□□□□ 0.44
PDZD4-201ENST00000164640 DNAJC2Q99543 621 aaKnown RBP17.82■□□□□ 0.44
PDZD4-201ENST00000164640 IL25Q9H293 177 aa17.82■□□□□ 0.44
PDZD4-201ENST00000164640 RGS12O14924 1447 aa17.81■□□□□ 0.44
PDZD4-201ENST00000164640 WAPLQ7Z5K2 1190 aa17.81■□□□□ 0.44
PDZD4-201ENST00000164640 TTC6Q86TZ1 520 aa17.81■□□□□ 0.44
PDZD4-201ENST00000164640 HSPA4P34932 840 aa17.8■□□□□ 0.44
PDZD4-201ENST00000164640 PLCH2O75038 1416 aa17.8■□□□□ 0.44
PDZD4-201ENST00000164640 PPFIA3O75145 1194 aa17.8■□□□□ 0.44
PDZD4-201ENST00000164640 MNS1Q8NEH6 495 aa17.8■□□□□ 0.44
PDZD4-201ENST00000164640 A0A087WWV3 80 aa17.8■□□□□ 0.44
PDZD4-201ENST00000164640 USP27XA6NNY8 438 aa17.8■□□□□ 0.44
PDZD4-201ENST00000164640 FBXO38Q6PIJ6 1188 aa17.8■□□□□ 0.44
PDZD4-201ENST00000164640 MTMR6Q9Y217 621 aa17.8■□□□□ 0.44
PDZD4-201ENST00000164640 SMC2O95347 1197 aa17.79■□□□□ 0.44
PDZD4-201ENST00000164640 DDX11Q96FC9 970 aa17.79■□□□□ 0.44
PDZD4-201ENST00000164640 PTPRCP08575 1304 aa17.79■□□□□ 0.44
PDZD4-201ENST00000164640 EIF2S2P20042 333 aaKnown RBP17.79■□□□□ 0.44
PDZD4-201ENST00000164640 ABCA6Q8N139 1617 aa17.79■□□□□ 0.44
PDZD4-201ENST00000164640 ERCC6LQ2NKX8 1250 aa17.79■□□□□ 0.44
PDZD4-201ENST00000164640 RUFY2Q8WXA3 655 aa17.79■□□□□ 0.44
PDZD4-201ENST00000164640 SRGAP3O43295 1099 aa17.78■□□□□ 0.44
PDZD4-201ENST00000164640 RAB11FIP3O75154 756 aa17.78■□□□□ 0.44
PDZD4-201ENST00000164640 SLU7O95391 586 aaKnown RBP17.78■□□□□ 0.44
PDZD4-201ENST00000164640 PDIA4P13667 645 aaKnown RBP17.78■□□□□ 0.44
PDZD4-201ENST00000164640 CDC37L1Q7L3B6 337 aa17.78■□□□□ 0.44
PDZD4-201ENST00000164640 SPHKAPQ2M3C7 1700 aa17.78■□□□□ 0.44
PDZD4-201ENST00000164640 CCDC69A6NI79 296 aa17.78■□□□□ 0.44
PDZD4-201ENST00000164640 ZNF853P0CG23 659 aa17.78■□□□□ 0.44
PDZD4-201ENST00000164640 IPO4Q8TEX9 1081 aaKnown RBP17.78■□□□□ 0.44
PDZD4-201ENST00000164640 PIK3R4Q99570 1358 aa17.78■□□□□ 0.44
PDZD4-201ENST00000164640 RPAP1Q9BWH6 1393 aaPredicted RBP17.78■□□□□ 0.44
PDZD4-201ENST00000164640 BMS1Q14692 1282 aaKnown RBP17.78■□□□□ 0.44
PDZD4-201ENST00000164640 ARHGAP31Q2M1Z3 1444 aa17.77■□□□□ 0.44
PDZD4-201ENST00000164640 CCDC144BQ3MJ40 725 aa17.77■□□□□ 0.44
PDZD4-201ENST00000164640 CCDC144CPQ8IYA2 1237 aa17.77■□□□□ 0.44
PDZD4-201ENST00000164640 TMEM87AQ8NBN3 555 aa17.77■□□□□ 0.44
PDZD4-201ENST00000164640 TMX1Q9H3N1 280 aa17.77■□□□□ 0.44
PDZD4-201ENST00000164640 RIMS2Q9UQ26 1411 aa17.77■□□□□ 0.43
PDZD4-201ENST00000164640 ERCC4Q92889 916 aaPredicted RBP17.77■□□□□ 0.43
PDZD4-201ENST00000164640 ARGLU1Q9NWB6 273 aaPredicted RBP17.77■□□□□ 0.43
PDZD4-201ENST00000164640 MORC2Q9Y6X9 1032 aaPredicted RBP17.77■□□□□ 0.43
PDZD4-201ENST00000164640 MAP3K4Q9Y6R4 1608 aa17.76■□□□□ 0.43
PDZD4-201ENST00000164640 RAD50Q92878 1312 aa17.76■□□□□ 0.43
PDZD4-201ENST00000164640 PDCP20941 246 aa17.76■□□□□ 0.43
PDZD4-201ENST00000164640 IL13P35225 146 aa17.76■□□□□ 0.43
PDZD4-201ENST00000164640 OSBPL3Q9H4L5 887 aa17.76■□□□□ 0.43
PDZD4-201ENST00000164640 NEK11Q8NG66 645 aa17.76■□□□□ 0.43
PDZD4-201ENST00000164640 UBXN4Q92575 508 aa17.76■□□□□ 0.43
PDZD4-201ENST00000164640 SNW1Q13573 536 aaKnown RBP17.76■□□□□ 0.43
PDZD4-201ENST00000164640 ARHGAP29Q52LW3 1261 aa17.76■□□□□ 0.43
PDZD4-201ENST00000164640 SYT10Q6XYQ8 523 aa17.76■□□□□ 0.43
PDZD4-201ENST00000164640 SCAND2PQ9GZW5 306 aaPredicted RBP17.76■□□□□ 0.43
PDZD4-201ENST00000164640 NR1I2O75469 434 aa17.75■□□□□ 0.43
PDZD4-201ENST00000164640 TMCO3Q6UWJ1 677 aa17.75■□□□□ 0.43
PDZD4-201ENST00000164640 DDX19AQ9NUU7 478 aaKnown RBP17.75■□□□□ 0.43
PDZD4-201ENST00000164640 CCDC171Q6TFL3 1326 aa17.75■□□□□ 0.43
PDZD4-201ENST00000164640 ADCK5Q3MIX3 580 aa17.75■□□□□ 0.43
PDZD4-201ENST00000164640 ZSCAN31Q96LW9 406 aaPredicted RBP17.75■□□□□ 0.43
PDZD4-201ENST00000164640 SDF4Q9BRK5 362 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms