RNA–Protein interactions for RNA: ENSMUST00000109543.8

Vcan-201, Transcript of Versican core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcan, Length 2,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-201ENSMUST00000109543 Nol8Q3UHX0 1147 aaKnown RBP19.02■□□□□ 0.64
Vcan-201ENSMUST00000109543 Chmp7Q8R1T1 451 aa19.02■□□□□ 0.64
Vcan-201ENSMUST00000109543 Irf9Q61179 399 aa19.01■□□□□ 0.63
Vcan-201ENSMUST00000109543 Card10P58660 1021 aa19.01■□□□□ 0.63
Vcan-201ENSMUST00000109543 Tgfb1i1Q62219 461 aa19.01■□□□□ 0.63
Vcan-201ENSMUST00000109543 Noc3lQ8VI84 807 aaKnown RBP19.01■□□□□ 0.63
Vcan-201ENSMUST00000109543 Phkg2Q9DB30 406 aa19.01■□□□□ 0.63
Vcan-201ENSMUST00000109543 Tceal9Q9DD24 104 aa19.01■□□□□ 0.63
Vcan-201ENSMUST00000109543 Cct4P80315 539 aaKnown RBP19■□□□□ 0.63
Vcan-201ENSMUST00000109543 Hoxa7P02830 229 aa19■□□□□ 0.63
Vcan-201ENSMUST00000109543 Unc5clQ6R653 518 aa18.99■□□□□ 0.63
Vcan-201ENSMUST00000109543 Bloc1s4Q8VED2 215 aa18.99■□□□□ 0.63
Vcan-201ENSMUST00000109543 Pdia6Q922R8 440 aaKnown RBP18.99■□□□□ 0.63
Vcan-201ENSMUST00000109543 Fam50bQ9WTJ8 334 aa18.99■□□□□ 0.63
Vcan-201ENSMUST00000109543 DekQ7TNV0 380 aaKnown RBP18.98■□□□□ 0.63
Vcan-201ENSMUST00000109543 Rapgef3Q8VCC8 918 aa18.98■□□□□ 0.63
Vcan-201ENSMUST00000109543 MccE9PWI3 1003 aa18.97■□□□□ 0.63
Vcan-201ENSMUST00000109543 Zkscan1Q8BGS3 561 aaKnown RBP18.97■□□□□ 0.63
Vcan-201ENSMUST00000109543 Tshz3Q8CGV9 1081 aa18.97■□□□□ 0.63
Vcan-201ENSMUST00000109543 Eif3aP23116 1344 aaKnown RBP18.97■□□□□ 0.63
Vcan-201ENSMUST00000109543 Pa2g4P50580 394 aaKnown RBP18.96■□□□□ 0.63
Vcan-201ENSMUST00000109543 Gtf3c3Q3TMP1 882 aa18.96■□□□□ 0.63
Vcan-201ENSMUST00000109543 Iqsec3Q3TES0 1195 aa18.96■□□□□ 0.63
Vcan-201ENSMUST00000109543 HellsQ60848 821 aa18.96■□□□□ 0.63
Vcan-201ENSMUST00000109543 Bicc1Q99MQ1 977 aaKnown RBP18.96■□□□□ 0.63
Vcan-201ENSMUST00000109543 Tns2Q8CGB6 1400 aa18.95■□□□□ 0.62
Vcan-201ENSMUST00000109543 Igfbp6P47880 238 aa18.95■□□□□ 0.62
Vcan-201ENSMUST00000109543 Stk3Q9JI10 497 aa18.95■□□□□ 0.62
Vcan-201ENSMUST00000109543 Bag4Q8CI61 457 aa18.95■□□□□ 0.62
Vcan-201ENSMUST00000109543 Pmfbp1Q9WVQ0 1022 aa18.95■□□□□ 0.62
Vcan-201ENSMUST00000109543 Cnnm1Q0GA42 951 aa18.94■□□□□ 0.62
Vcan-201ENSMUST00000109543 Amigo3Q8C2S7 508 aa18.94■□□□□ 0.62
Vcan-201ENSMUST00000109543 LlphQ9D945 130 aaKnown RBP18.94■□□□□ 0.62
Vcan-201ENSMUST00000109543 Phactr2B1AVP0 632 aa18.94■□□□□ 0.62
Vcan-201ENSMUST00000109543 Mum1Q6DID5 682 aa18.94■□□□□ 0.62
Vcan-201ENSMUST00000109543 Grm8P47743 908 aa18.93■□□□□ 0.62
Vcan-201ENSMUST00000109543 Asic4Q7TNS7 539 aa18.93■□□□□ 0.62
Vcan-201ENSMUST00000109543 RgmbQ7TQ33 436 aa18.93■□□□□ 0.62
Vcan-201ENSMUST00000109543 Lmbr1lQ9D1E5 489 aa18.93■□□□□ 0.62
Vcan-201ENSMUST00000109543 TefQ9JLC6 301 aa18.93■□□□□ 0.62
Vcan-201ENSMUST00000109543 Rasa1E9PYG6 1038 aa18.92■□□□□ 0.62
Vcan-201ENSMUST00000109543 Tnks1bp1P58871 1720 aa18.92■□□□□ 0.62
Vcan-201ENSMUST00000109543 Prkab2Q6PAM0 271 aa18.92■□□□□ 0.62
Vcan-201ENSMUST00000109543 NexnQ7TPW1 607 aa18.92■□□□□ 0.62
Vcan-201ENSMUST00000109543 Pip4k2bQ80XI4 416 aa18.92■□□□□ 0.62
Vcan-201ENSMUST00000109543 Jakmip1Q8BVL9 626 aa18.92■□□□□ 0.62
Vcan-201ENSMUST00000109543 AnlnQ8K298 1121 aaKnown RBP18.92■□□□□ 0.62
Vcan-201ENSMUST00000109543 Vwa3bJ9JI28 736 aa18.92■□□□□ 0.62
Vcan-201ENSMUST00000109543 Anapc15P60007 132 aa18.92■□□□□ 0.62
Vcan-201ENSMUST00000109543 Chmp4cQ9D7F7 232 aa18.92■□□□□ 0.62
Vcan-201ENSMUST00000109543 Abcc4E9Q236 1325 aa18.92■□□□□ 0.62
Vcan-201ENSMUST00000109543 4930572O03RikQ8C5Y0 211 aa18.91■□□□□ 0.62
Vcan-201ENSMUST00000109543 Brf1Q8CFK2 676 aa18.91■□□□□ 0.62
Vcan-201ENSMUST00000109543 Zbtb3Q91X45 518 aa18.91■□□□□ 0.62
Vcan-201ENSMUST00000109543 PigbQ9JJQ0 542 aa18.91■□□□□ 0.62
Vcan-201ENSMUST00000109543 Ttll7A4Q9F0 912 aa18.9■□□□□ 0.62
Vcan-201ENSMUST00000109543 Ppm1mQ8BU27 406 aa18.9■□□□□ 0.62
Vcan-201ENSMUST00000109543 4933402E13RikQ9D4D2 429 aa18.9■□□□□ 0.62
Vcan-201ENSMUST00000109543 Gdpd2Q9ESM6 539 aa18.9■□□□□ 0.62
Vcan-201ENSMUST00000109543 Dnttip2Q8R2M2 758 aaKnown RBP18.9■□□□□ 0.62
Vcan-201ENSMUST00000109543 Slit1Q80TR4 1531 aa18.89■□□□□ 0.62
Vcan-201ENSMUST00000109543 Hspa2P17156 633 aa18.89■□□□□ 0.61
Vcan-201ENSMUST00000109543 Fam228bQ497Q6 232 aa18.89■□□□□ 0.61
Vcan-201ENSMUST00000109543 Mlh1Q9JK91 760 aa18.89■□□□□ 0.61
Vcan-201ENSMUST00000109543 Scn4aQ9ER60 1841 aa18.89■□□□□ 0.61
Vcan-201ENSMUST00000109543 Ms4a2P20490 235 aa18.89■□□□□ 0.61
Vcan-201ENSMUST00000109543 VgfQ0VGU4 617 aa18.89■□□□□ 0.61
Vcan-201ENSMUST00000109543 EvcP57680 1005 aa18.88■□□□□ 0.61
Vcan-201ENSMUST00000109543 Zdhhc9P59268 364 aa18.88■□□□□ 0.61
Vcan-201ENSMUST00000109543 EspnlQ3UYR4 1005 aa18.88■□□□□ 0.61
Vcan-201ENSMUST00000109543 Larp1Q6ZQ58 1072 aaKnown RBP18.88■□□□□ 0.61
Vcan-201ENSMUST00000109543 Slc39a6Q8C145 765 aa18.88■□□□□ 0.61
Vcan-201ENSMUST00000109543 FocadA2AKG8 1798 aa18.88■□□□□ 0.61
Vcan-201ENSMUST00000109543 Edc3Q8K2D3 508 aaKnown RBP18.88■□□□□ 0.61
Vcan-201ENSMUST00000109543 Taf5lQ91WQ5 589 aa18.88■□□□□ 0.61
Vcan-201ENSMUST00000109543 Kiaa0232Q80U59 1396 aaKnown RBP18.87■□□□□ 0.61
Vcan-201ENSMUST00000109543 Rad50P70388 1312 aa18.87■□□□□ 0.61
Vcan-201ENSMUST00000109543 Ets1P27577 440 aa18.86■□□□□ 0.61
Vcan-201ENSMUST00000109543 Zbtb45Q52KG4 520 aa18.86■□□□□ 0.61
Vcan-201ENSMUST00000109543 Morc2aQ69ZX6 1030 aa18.86■□□□□ 0.61
Vcan-201ENSMUST00000109543 Filip1lQ6P6L0 1131 aa18.86■□□□□ 0.61
Vcan-201ENSMUST00000109543 Eif3bQ8JZQ9 803 aaKnown RBP18.86■□□□□ 0.61
Vcan-201ENSMUST00000109543 Ssfa2Q922B9 1252 aa18.86■□□□□ 0.61
Vcan-201ENSMUST00000109543 Speer4bQ9D9F7 267 aa18.86■□□□□ 0.61
Vcan-201ENSMUST00000109543 Ubr2Q6WKZ8 1755 aa18.86■□□□□ 0.61
Vcan-201ENSMUST00000109543 Gm21663A0A0G2JE01 267 aa18.86■□□□□ 0.61
Vcan-201ENSMUST00000109543 Brpf1B2RRD7 1212 aa18.86■□□□□ 0.61
Vcan-201ENSMUST00000109543 Gm7361D3Z6R1 267 aa18.86■□□□□ 0.61
Vcan-201ENSMUST00000109543 5031410I06RikE9Q4E0 267 aa18.86■□□□□ 0.61
Vcan-201ENSMUST00000109543 Gm1979E9QAN3 267 aa18.86■□□□□ 0.61
Vcan-201ENSMUST00000109543 Gm5862K7N5V5 267 aa18.86■□□□□ 0.61
Vcan-201ENSMUST00000109543 Gm10220K7N660 267 aa18.86■□□□□ 0.61
Vcan-201ENSMUST00000109543 Pdzrn3Q69ZS0 1063 aa18.86■□□□□ 0.61
Vcan-201ENSMUST00000109543 Ddx60E9PZQ1 1711 aa18.86■□□□□ 0.61
Vcan-201ENSMUST00000109543 Tjp1P39447 1745 aaKnown RBP18.86■□□□□ 0.61
Vcan-201ENSMUST00000109543 Il4rP16382 810 aa18.85■□□□□ 0.61
Vcan-201ENSMUST00000109543 Txnrd1Q9JMH6 613 aa18.85■□□□□ 0.61
Vcan-201ENSMUST00000109543 Vsig10D3YX43 558 aa18.85■□□□□ 0.61
Vcan-201ENSMUST00000109543 Zpr1Q62384 459 aa18.85■□□□□ 0.61
Vcan-201ENSMUST00000109543 Efcab2Q9CQ46 164 aa18.85■□□□□ 0.61
Retrieved 100 of 22,080 RNA–protein pairs in 24.3 ms