RNA–Protein interactions for RNA: ENST00000641476.1

SRRT-219, Transcript of serrate, RNA effector molecule, humanhuman

Gene SRRT, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-219ENST00000641476 ANKHQ9HCJ1 492 aa13.79□□□□□ -0.2
SRRT-219ENST00000641476 CHST11Q9NPF2 352 aa13.79□□□□□ -0.2
SRRT-219ENST00000641476 PPANQ9NQ55 473 aaKnown RBP13.79□□□□□ -0.2
SRRT-219ENST00000641476 ARL15Q9NXU5 204 aa13.79□□□□□ -0.2
SRRT-219ENST00000641476 C19orf25Q9UFG5 118 aaPredicted RBP13.79□□□□□ -0.2
SRRT-219ENST00000641476 CORO1CQ9ULV4 474 aaPredicted RBP13.79□□□□□ -0.2
SRRT-219ENST00000641476 SCN3AQ9NY46 2000 aa13.79□□□□□ -0.2
SRRT-219ENST00000641476 SCN2AQ99250 2005 aa13.78□□□□□ -0.2
SRRT-219ENST00000641476 LCMT2O60294 686 aaKnown RBP13.78□□□□□ -0.2
SRRT-219ENST00000641476 WDPCPO95876 746 aa13.78□□□□□ -0.2
SRRT-219ENST00000641476 HIST1H2AGP0C0S8 130 aaPredicted RBP13.78□□□□□ -0.2
SRRT-219ENST00000641476 HIST1H2ADP20671 130 aa13.78□□□□□ -0.2
SRRT-219ENST00000641476 GRK3P35626 688 aa13.78□□□□□ -0.2
SRRT-219ENST00000641476 DEKP35659 375 aaKnown RBP13.78□□□□□ -0.2
SRRT-219ENST00000641476 AP1S2P56377 157 aa13.78□□□□□ -0.2
SRRT-219ENST00000641476 IL2P60568 153 aa13.78□□□□□ -0.2
SRRT-219ENST00000641476 MEF2AQ02078 507 aaPredicted RBP13.78□□□□□ -0.2
SRRT-219ENST00000641476 HP1BP3Q5SSJ5 553 aaPredicted RBP13.78□□□□□ -0.2
SRRT-219ENST00000641476 STEAP4Q687X5 459 aa13.78□□□□□ -0.2
SRRT-219ENST00000641476 PLAG1Q6DJT9 500 aa13.78□□□□□ -0.2
SRRT-219ENST00000641476 FAM45BPQ6NSW5 357 aa13.78□□□□□ -0.2
SRRT-219ENST00000641476 BNC2Q6ZN30 1099 aaPredicted RBP13.78□□□□□ -0.2
SRRT-219ENST00000641476 CPEB2Q7Z5Q1 589 aaKnown RBP13.78□□□□□ -0.2
SRRT-219ENST00000641476 MRGPRGQ86SM5 289 aa13.78□□□□□ -0.2
SRRT-219ENST00000641476 PDIK1LQ8N165 341 aa13.78□□□□□ -0.2
SRRT-219ENST00000641476 MFSD9Q8NBP5 474 aa13.78□□□□□ -0.2
SRRT-219ENST00000641476 ABHD11Q8NFV4 315 aa13.78□□□□□ -0.2
SRRT-219ENST00000641476 OR56A3Q8NH54 315 aa13.78□□□□□ -0.2
SRRT-219ENST00000641476 FAM45AQ8TCE6 357 aa13.78□□□□□ -0.2
SRRT-219ENST00000641476 SLC13A3Q8WWT9 602 aa13.78□□□□□ -0.2
SRRT-219ENST00000641476 NR4A3Q92570 626 aa13.78□□□□□ -0.2
SRRT-219ENST00000641476 HAS2Q92819 552 aa13.78□□□□□ -0.2
SRRT-219ENST00000641476 POM121Q96HA1 1249 aa13.78□□□□□ -0.2
SRRT-219ENST00000641476 HIST1H2AHQ96KK5 128 aa13.78□□□□□ -0.2
SRRT-219ENST00000641476 CAPZA3Q96KX2 299 aa13.78□□□□□ -0.2
SRRT-219ENST00000641476 OR4K3Q96R72 315 aa13.78□□□□□ -0.2
SRRT-219ENST00000641476 TAAR6Q96RI8 345 aa13.78□□□□□ -0.2
SRRT-219ENST00000641476 HIST1H2AJQ99878 128 aa13.78□□□□□ -0.2
SRRT-219ENST00000641476 TRIM51Q9BSJ1 452 aa13.78□□□□□ -0.2
SRRT-219ENST00000641476 H2AFJQ9BTM1 129 aa13.78□□□□□ -0.2
SRRT-219ENST00000641476 FAM129AQ9BZQ8 928 aa13.78□□□□□ -0.2
SRRT-219ENST00000641476 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.78□□□□□ -0.2
SRRT-219ENST00000641476 SUCOQ9UBS9 1254 aaKnown RBP13.78□□□□□ -0.2
SRRT-219ENST00000641476 TRGV8A0A0C4DH27 118 aa13.77□□□□□ -0.21
SRRT-219ENST00000641476 OR2W5A6NFC9 320 aa13.77□□□□□ -0.21
SRRT-219ENST00000641476 NDUFS4O43181 175 aa13.77□□□□□ -0.21
SRRT-219ENST00000641476 ICAM2P13598 275 aa13.77□□□□□ -0.21
SRRT-219ENST00000641476 NPPBP16860 134 aa13.77□□□□□ -0.21
SRRT-219ENST00000641476 ZNF37AP17032 561 aaPredicted RBP13.77□□□□□ -0.21
SRRT-219ENST00000641476 CCR8P51685 355 aa13.77□□□□□ -0.21
SRRT-219ENST00000641476 DR1Q01658 176 aa13.77□□□□□ -0.21
SRRT-219ENST00000641476 ZNF33BQ06732 778 aa13.77□□□□□ -0.21
SRRT-219ENST00000641476 TESK1Q15569 626 aa13.77□□□□□ -0.21
SRRT-219ENST00000641476 ZNF630Q2M218 657 aaPredicted RBP13.77□□□□□ -0.21
SRRT-219ENST00000641476 BTBD16Q32M84 506 aa13.77□□□□□ -0.21
SRRT-219ENST00000641476 ABHD17BQ5VST6 288 aa13.77□□□□□ -0.21
SRRT-219ENST00000641476 DUPD1Q68J44 220 aa13.77□□□□□ -0.21
SRRT-219ENST00000641476 ZNF324BQ6AW86 544 aaPredicted RBP13.77□□□□□ -0.21
SRRT-219ENST00000641476 SBSNQ6UWP8 590 aa13.77□□□□□ -0.21
SRRT-219ENST00000641476 SYDE1Q6ZW31 735 aaPredicted RBP13.77□□□□□ -0.21
SRRT-219ENST00000641476 ANKRD37Q7Z713 158 aa13.77□□□□□ -0.21
SRRT-219ENST00000641476 KLHL7Q8IXQ5 586 aa13.77□□□□□ -0.21
SRRT-219ENST00000641476 ZNF740Q8NDX6 193 aa13.77□□□□□ -0.21
SRRT-219ENST00000641476 FBXL8Q96CD0 374 aa13.77□□□□□ -0.21
SRRT-219ENST00000641476 CCDC120Q96HB5 630 aa13.77□□□□□ -0.21
SRRT-219ENST00000641476 CYTH2Q99418 400 aa13.77□□□□□ -0.21
SRRT-219ENST00000641476 SARGQ9BW04 601 aa13.77□□□□□ -0.21
SRRT-219ENST00000641476 SPNS1Q9H2V7 528 aa13.77□□□□□ -0.21
SRRT-219ENST00000641476 IKZF3Q9UKT9 509 aa13.77□□□□□ -0.21
SRRT-219ENST00000641476 NAALAD2Q9Y3Q0 740 aa13.77□□□□□ -0.21
SRRT-219ENST00000641476 SLC22A7Q9Y694 548 aa13.77□□□□□ -0.21
SRRT-219ENST00000641476 TEX264Q9Y6I9 313 aa13.77□□□□□ -0.21
SRRT-219ENST00000641476 TACC2O95359 2948 aa13.77□□□□□ -0.21
SRRT-219ENST00000641476 TRBC2A0A5B9 178 aa13.76□□□□□ -0.21
SRRT-219ENST00000641476 OR5H15A6NDH6 313 aa13.76□□□□□ -0.21
SRRT-219ENST00000641476 CDC123O75794 336 aaPredicted RBP13.76□□□□□ -0.21
SRRT-219ENST00000641476 SEC31AO94979 1220 aaKnown RBP13.76□□□□□ -0.21
SRRT-219ENST00000641476 GUCA1CO95843 209 aa13.76□□□□□ -0.21
SRRT-219ENST00000641476 ENO2P09104 434 aaPredicted RBP13.76□□□□□ -0.21
SRRT-219ENST00000641476 AGTR2P50052 363 aa13.76□□□□□ -0.21
SRRT-219ENST00000641476 ITGA8P53708 1063 aa13.76□□□□□ -0.21
SRRT-219ENST00000641476 GNG11P61952 73 aa13.76□□□□□ -0.21
SRRT-219ENST00000641476 RHAGQ02094 409 aa13.76□□□□□ -0.21
SRRT-219ENST00000641476 HERC3Q15034 1050 aa13.76□□□□□ -0.21
SRRT-219ENST00000641476 PPP1R3AQ16821 1122 aa13.76□□□□□ -0.21
SRRT-219ENST00000641476 AFAP1L2Q8N4X5 818 aa13.76□□□□□ -0.21
SRRT-219ENST00000641476 OR4K1Q8NGD4 311 aa13.76□□□□□ -0.21
SRRT-219ENST00000641476 OR5T3Q8NGG3 340 aa13.76□□□□□ -0.21
SRRT-219ENST00000641476 ATL1Q8WXF7 558 aa13.76□□□□□ -0.21
SRRT-219ENST00000641476 TSLPQ969D9 159 aa13.76□□□□□ -0.21
SRRT-219ENST00000641476 LRRC39Q96DD0 335 aa13.76□□□□□ -0.21
SRRT-219ENST00000641476 SNF8Q96H20 258 aa13.76□□□□□ -0.21
SRRT-219ENST00000641476 PEX11GQ96HA9 241 aa13.76□□□□□ -0.21
SRRT-219ENST00000641476 TSNARE1Q96NA8 513 aa13.76□□□□□ -0.21
SRRT-219ENST00000641476 RUNDC3BQ96NL0 473 aa13.76□□□□□ -0.21
SRRT-219ENST00000641476 OR1F2PQ96R84 312 aa13.76□□□□□ -0.21
SRRT-219ENST00000641476 TRIM54Q9BYV2 358 aa13.76□□□□□ -0.21
SRRT-219ENST00000641476 LANCL2Q9NS86 450 aa13.76□□□□□ -0.21
SRRT-219ENST00000641476 TEKT2Q9UIF3 430 aa13.76□□□□□ -0.21
SRRT-219ENST00000641476 SH3BGRL2Q9UJC5 107 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms