RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 OR9A4Q8NGU2 314 aa16.3■□□□□ 0.2
RETREG3-210ENST00000590541 LILRB4Q8NHJ6 448 aa16.3■□□□□ 0.2
RETREG3-210ENST00000590541 FAM57AQ8TBR7 257 aa16.3■□□□□ 0.2
RETREG3-210ENST00000590541 SLCO2A1Q92959 643 aa16.3■□□□□ 0.2
RETREG3-210ENST00000590541 RERGQ96A58 199 aaPredicted RBP16.3■□□□□ 0.2
RETREG3-210ENST00000590541 ZNF669Q96BR6 464 aaPredicted RBP16.3■□□□□ 0.2
RETREG3-210ENST00000590541 ZNF559Q9BR84 538 aa16.3■□□□□ 0.2
RETREG3-210ENST00000590541 CCDC68Q9H2F9 335 aa16.3■□□□□ 0.2
RETREG3-210ENST00000590541 GSX1Q9H4S2 264 aaPredicted RBP16.3■□□□□ 0.2
RETREG3-210ENST00000590541 LRFN1Q9P244 771 aa16.3■□□□□ 0.2
RETREG3-210ENST00000590541 PCYOX1Q9UHG3 505 aa16.3■□□□□ 0.2
RETREG3-210ENST00000590541 CRYL1Q9Y2S2 319 aa16.3■□□□□ 0.2
RETREG3-210ENST00000590541 ZCWPW2A0A1B0GU75 182 aa16.29■□□□□ 0.2
RETREG3-210ENST00000590541 CTAGE9A4FU28 777 aa16.29■□□□□ 0.2
RETREG3-210ENST00000590541 GOLGA8KD6RF30 607 aa16.29■□□□□ 0.2
RETREG3-210ENST00000590541 H0YIG0 161 aa16.29■□□□□ 0.2
RETREG3-210ENST00000590541 GOLGA8TH3BQL2 631 aa16.29■□□□□ 0.2
RETREG3-210ENST00000590541 TXNDC9O14530 226 aa16.29■□□□□ 0.2
RETREG3-210ENST00000590541 NME2P1O60361 137 aa16.29■□□□□ 0.2
RETREG3-210ENST00000590541 EZRP15311 586 aaKnown RBP16.29■□□□□ 0.2
RETREG3-210ENST00000590541 NME2P22392 152 aa16.29■□□□□ 0.2
RETREG3-210ENST00000590541 HSD17B2P37059 387 aa16.29■□□□□ 0.2
RETREG3-210ENST00000590541 AVPR1BP47901 424 aa16.29■□□□□ 0.2
RETREG3-210ENST00000590541 TERF1P54274 439 aa16.29■□□□□ 0.2
RETREG3-210ENST00000590541 PRDX1Q06830 199 aaKnown RBP16.29■□□□□ 0.2
RETREG3-210ENST00000590541 MAPKAPK3Q16644 382 aa16.29■□□□□ 0.2
RETREG3-210ENST00000590541 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.29■□□□□ 0.2
RETREG3-210ENST00000590541 ZNF470Q6ECI4 717 aa16.29■□□□□ 0.2
RETREG3-210ENST00000590541 PRSS41Q7RTY9 318 aa16.29■□□□□ 0.2
RETREG3-210ENST00000590541 CD163Q86VB7 1156 aa16.29■□□□□ 0.2
RETREG3-210ENST00000590541 PIAS4Q8N2W9 510 aaPredicted RBP16.29■□□□□ 0.2
RETREG3-210ENST00000590541 HORMAD2Q8N7B1 307 aa16.29■□□□□ 0.2
RETREG3-210ENST00000590541 ASB5Q8WWX0 329 aa16.29■□□□□ 0.2
RETREG3-210ENST00000590541 SMPDL3AQ92484 453 aa16.29■□□□□ 0.2
RETREG3-210ENST00000590541 SIGLEC10Q96LC7 697 aa16.29■□□□□ 0.2
RETREG3-210ENST00000590541 RUNDC3BQ96NL0 473 aa16.29■□□□□ 0.2
RETREG3-210ENST00000590541 OLFM1Q99784 485 aa16.29■□□□□ 0.2
RETREG3-210ENST00000590541 NAT9Q9BTE0 207 aa16.29■□□□□ 0.2
RETREG3-210ENST00000590541 FAM114A2Q9NRY5 505 aa16.29■□□□□ 0.2
RETREG3-210ENST00000590541 TRMT1Q9NXH9 659 aaKnown RBP16.29■□□□□ 0.2
RETREG3-210ENST00000590541 KCNN3Q9UGI6 736 aa16.29■□□□□ 0.2
RETREG3-210ENST00000590541 TAC3Q9UHF0 121 aa16.29■□□□□ 0.2
RETREG3-210ENST00000590541 RNF6Q9Y252 685 aa16.29■□□□□ 0.2
RETREG3-210ENST00000590541 HEATR5BQ9P2D3 2071 aa16.28■□□□□ 0.2
RETREG3-210ENST00000590541 A0A1B0GTH9 108 aa16.28■□□□□ 0.2
RETREG3-210ENST00000590541 FAM90A27PA6NNH2 459 aa16.28■□□□□ 0.2
RETREG3-210ENST00000590541 ZNF839A8K0R7 811 aa16.28■□□□□ 0.2
RETREG3-210ENST00000590541 GOLGA8MH3BSY2 632 aa16.28■□□□□ 0.2
RETREG3-210ENST00000590541 SMAPO00193 183 aa16.28■□□□□ 0.2
RETREG3-210ENST00000590541 NIPSNAP2O75323 286 aa16.28■□□□□ 0.2
RETREG3-210ENST00000590541 SLC25A12O75746 678 aa16.28■□□□□ 0.2
RETREG3-210ENST00000590541 TTC4O95801 387 aa16.28■□□□□ 0.2
RETREG3-210ENST00000590541 HOXD4P09016 255 aaPredicted RBP16.28■□□□□ 0.2
RETREG3-210ENST00000590541 RPA3P35244 121 aaPredicted RBP16.28■□□□□ 0.2
RETREG3-210ENST00000590541 PTGS2P35354 604 aa16.28■□□□□ 0.2
RETREG3-210ENST00000590541 AGTR2P50052 363 aa16.28■□□□□ 0.2
RETREG3-210ENST00000590541 RELAQ04206 551 aa16.28■□□□□ 0.2
RETREG3-210ENST00000590541 PTK6Q13882 451 aa16.28■□□□□ 0.2
RETREG3-210ENST00000590541 ARHGAP19Q14CB8 494 aa16.28■□□□□ 0.2
RETREG3-210ENST00000590541 NDUFA9Q16795 377 aa16.28■□□□□ 0.2
RETREG3-210ENST00000590541 ICE2Q659A1 982 aa16.28■□□□□ 0.2
RETREG3-210ENST00000590541 SYDE1Q6ZW31 735 aaPredicted RBP16.28■□□□□ 0.2
RETREG3-210ENST00000590541 ZNF227Q86WZ6 799 aa16.28■□□□□ 0.2
RETREG3-210ENST00000590541 PLD3Q8IV08 490 aa16.28■□□□□ 0.2
RETREG3-210ENST00000590541 SLC5A8Q8N695 610 aa16.28■□□□□ 0.2
RETREG3-210ENST00000590541 CHDHQ8NE62 594 aaPredicted RBP16.28■□□□□ 0.2
RETREG3-210ENST00000590541 OR9A1PQ8NGU1 263 aa16.28■□□□□ 0.2
RETREG3-210ENST00000590541 OR51Q1Q8NH59 317 aa16.28■□□□□ 0.2
RETREG3-210ENST00000590541 KCNJ9Q92806 393 aa16.28■□□□□ 0.2
RETREG3-210ENST00000590541 FAM167BQ9BTA0 163 aa16.28■□□□□ 0.2
RETREG3-210ENST00000590541 KCNF1Q9H3M0 494 aa16.28■□□□□ 0.2
RETREG3-210ENST00000590541 CCM2LQ9NUG4 571 aaPredicted RBP16.28■□□□□ 0.2
RETREG3-210ENST00000590541 TSR3Q9UJK0 312 aaKnown RBP16.28■□□□□ 0.2
RETREG3-210ENST00000590541 MAD1L1Q9Y6D9 718 aa16.28■□□□□ 0.2
RETREG3-210ENST00000590541 HAT1O14929 419 aa16.27■□□□□ 0.2
RETREG3-210ENST00000590541 PSIP1O75475 530 aaKnown RBP16.27■□□□□ 0.2
RETREG3-210ENST00000590541 NSA2O95478 260 aaKnown RBP16.27■□□□□ 0.2
RETREG3-210ENST00000590541 STATHP02808 62 aa16.27■□□□□ 0.2
RETREG3-210ENST00000590541 CATP04040 527 aaKnown RBP16.27■□□□□ 0.2
RETREG3-210ENST00000590541 TPOP07202 933 aa16.27■□□□□ 0.2
RETREG3-210ENST00000590541 ENO3P13929 434 aaPredicted RBP16.27■□□□□ 0.2
RETREG3-210ENST00000590541 DRD2P14416 443 aa16.27■□□□□ 0.2
RETREG3-210ENST00000590541 CHRNB4P30926 498 aa16.27■□□□□ 0.2
RETREG3-210ENST00000590541 XCR1P46094 333 aa16.27■□□□□ 0.2
RETREG3-210ENST00000590541 RNASEH2BQ5TBB1 312 aaKnown RBP16.27■□□□□ 0.2
RETREG3-210ENST00000590541 CES4AQ5XG92 561 aa16.27■□□□□ 0.2
RETREG3-210ENST00000590541 PAPD4Q6PIY7 484 aaKnown RBP16.27■□□□□ 0.2
RETREG3-210ENST00000590541 LGI4Q8N135 537 aa16.27■□□□□ 0.2
RETREG3-210ENST00000590541 RPRMLQ8N4K4 120 aa16.27■□□□□ 0.2
RETREG3-210ENST00000590541 NINJ1Q92982 152 aa16.27■□□□□ 0.2
RETREG3-210ENST00000590541 CDCP1Q9H5V8 836 aa16.27■□□□□ 0.2
RETREG3-210ENST00000590541 DLL4Q9NR61 685 aa16.27■□□□□ 0.2
RETREG3-210ENST00000590541 C20orf96Q9NUD7 363 aaPredicted RBP16.27■□□□□ 0.2
RETREG3-210ENST00000590541 HCN3Q9P1Z3 774 aa16.27■□□□□ 0.2
RETREG3-210ENST00000590541 ASIC3Q9UHC3 531 aa16.27■□□□□ 0.2
RETREG3-210ENST00000590541 INTS1Q8N201 2190 aaKnown RBP16.26■□□□□ 0.19
RETREG3-210ENST00000590541 ARHGEF33A8MVX0 844 aa16.26■□□□□ 0.19
RETREG3-210ENST00000590541 MYO1CO00159 1063 aa16.26■□□□□ 0.19
RETREG3-210ENST00000590541 EIF3FO00303 357 aaPredicted RBP16.26■□□□□ 0.19
RETREG3-210ENST00000590541 DNALI1O14645 258 aaPredicted RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms