RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 SLC17A6Q9P2U8 582 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 NFKBIL1Q9UBC1 381 aaPredicted RBP4.79□□□□□ -1.64
PTPN13-209ENST00000511467 EP300Q09472 2414 aaPredicted RBP4.79□□□□□ -1.64
PTPN13-209ENST00000511467 CACNA1HO95180 2353 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 ARHGEF33A8MVX0 844 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 BCKDKO14874 412 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 PIP5K1BO14986 540 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 OR2T1O43869 369 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 H6PDO95479 791 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 CHRNA1P02708 482 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 HAPLN1P10915 354 aaPredicted RBP4.79□□□□□ -1.64
PTPN13-209ENST00000511467 SMPD1P17405 629 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 AGTR2P50052 363 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 STC1P52823 247 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 C1QTNF8P60827 252 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 SLC7A9P82251 487 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 DUSP4Q13115 394 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 PWP1Q13610 501 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 SLC10A6Q3KNW5 377 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 COLEC12Q5KU26 742 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 PLET1Q6UQ28 207 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 LIPIQ6XZB0 460 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 RAB43Q86YS6 212 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 PTGR2Q8N8N7 351 aaPredicted RBP4.79□□□□□ -1.64
PTPN13-209ENST00000511467 CPEB3Q8NE35 698 aaKnown RBP4.79□□□□□ -1.64
PTPN13-209ENST00000511467 GOT1L1Q8NHS2 421 aaPredicted RBP4.79□□□□□ -1.64
PTPN13-209ENST00000511467 OR5P2Q8WZ92 322 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 PRRG4Q9BZD6 226 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 KCNG2Q9UJ96 466 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 NOX1Q9Y5S8 564 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 TANC2Q9HCD6 1990 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 TGM5O43548 720 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 CCNB2O95067 398 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 MAP3K6O95382 1288 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 ZNF823P16415 610 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 ASPAP45381 313 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 RORCP51449 518 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 ADAM8P78325 824 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 DDX39BQ13838 428 aaKnown RBP4.79□□□□□ -1.64
PTPN13-209ENST00000511467 KCNJ11Q14654 390 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 CTC1Q2NKJ3 1217 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 EIF2S3LQ2VIR3 472 aaKnown RBP4.79□□□□□ -1.64
PTPN13-209ENST00000511467 PLA1AQ53H76 456 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 PIGGQ5H8A4 983 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 RFWD3Q6PCD5 774 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 HSDL2Q6YN16 418 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 CLNKQ7Z7G1 428 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 SETD6Q8TBK2 473 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 GIPC3Q8TF64 312 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 WACQ9BTA9 647 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 TMEM121BQ9BXQ6 578 aaPredicted RBP4.79□□□□□ -1.64
PTPN13-209ENST00000511467 POTEKPQ9BYX7 375 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 LACRTQ9GZZ8 138 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 KCNIP2Q9NS61 270 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.79□□□□□ -1.64
PTPN13-209ENST00000511467 SCP2D1Q9UJQ7 156 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 ZNF490Q9ULM2 529 aaPredicted RBP4.79□□□□□ -1.64
PTPN13-209ENST00000511467 OAS3Q9Y6K5 1087 aaKnown RBP4.79□□□□□ -1.64
PTPN13-209ENST00000511467 CLCA3PQ9Y6N3 262 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 LOC102725191A0A1B0GVB3 256 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 C1orf226A1L170 272 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 PRAMEF26H0Y7S4 382 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 GPR25O00155 361 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 DCXO43602 365 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 SRPX2O60687 465 aaPredicted RBP4.79□□□□□ -1.64
PTPN13-209ENST00000511467 ITGB2P05107 769 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 C2P06681 752 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 EIF1P41567 113 aaKnown RBP4.79□□□□□ -1.64
PTPN13-209ENST00000511467 OMPP47874 163 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 STK19P49842 368 aaPredicted RBP4.79□□□□□ -1.64
PTPN13-209ENST00000511467 ALDH3A2P51648 485 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 DUOXA1Q1HG43 343 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 ZMAT1Q5H9K5 638 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 MS4A13Q5J8X5 152 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 NXPE1Q8N323 547 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 MINDY1Q8N5J2 469 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 ZNF563Q8TA94 476 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 NXPE2Q96DL1 559 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 SGF29Q96ES7 293 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 IMP4Q96G21 291 aaKnown RBP4.79□□□□□ -1.64
PTPN13-209ENST00000511467 ZFYVE19Q96K21 471 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 HDHD2Q9H0R4 259 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 OSGEPQ9NPF4 335 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 ZNF446Q9NWS9 450 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 MKL2Q9ULH7 1088 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 DHRS7Q9Y394 339 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 DOPEY2Q9Y3R5 2298 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 BTBD17A6NE02 478 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 SLC19A2O60779 497 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 ADRB2P07550 413 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 GNAO1P09471 354 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 TNFSF4P23510 183 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 HMGCLP35914 325 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 ZNF41P51814 821 aaPredicted RBP4.79□□□□□ -1.64
PTPN13-209ENST00000511467 CLCQ05315 142 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 GRM7Q14831 915 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 KCTD19Q17RG1 926 aaPredicted RBP4.79□□□□□ -1.64
PTPN13-209ENST00000511467 ASTE1Q2TB18 679 aaPredicted RBP4.79□□□□□ -1.64
PTPN13-209ENST00000511467 PTPN20Q4JDL3 420 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 ZNF227Q86WZ6 799 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms