RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 RPS17P08708 135 aaKnown RBP14.25□□□□□ -0.13
RNF4-210ENST00000508235 SBK3P0C264 359 aa14.25□□□□□ -0.13
RNF4-210ENST00000508235 MYL2P10916 166 aa14.25□□□□□ -0.13
RNF4-210ENST00000508235 ITGAXP20702 1163 aa14.25□□□□□ -0.13
RNF4-210ENST00000508235 ARL1P40616 181 aaPredicted RBP14.25□□□□□ -0.13
RNF4-210ENST00000508235 NAA20P61599 178 aa14.25□□□□□ -0.13
RNF4-210ENST00000508235 HERVK_113P63132 956 aa14.25□□□□□ -0.13
RNF4-210ENST00000508235 CYP4F2P78329 520 aa14.25□□□□□ -0.13
RNF4-210ENST00000508235 PHEXP78562 749 aa14.25□□□□□ -0.13
RNF4-210ENST00000508235 ZNF844Q08AG5 666 aa14.25□□□□□ -0.13
RNF4-210ENST00000508235 ERV3-1Q14264 604 aa14.25□□□□□ -0.13
RNF4-210ENST00000508235 SSPNQ14714 243 aa14.25□□□□□ -0.13
RNF4-210ENST00000508235 SLC9A5Q14940 896 aa14.25□□□□□ -0.13
RNF4-210ENST00000508235 UGT8Q16880 541 aa14.25□□□□□ -0.13
RNF4-210ENST00000508235 RAB43Q86YS6 212 aa14.25□□□□□ -0.13
RNF4-210ENST00000508235 MYLK4Q86YV6 388 aaPredicted RBP14.25□□□□□ -0.13
RNF4-210ENST00000508235 SRRM1Q8IYB3 904 aaKnown RBP14.25□□□□□ -0.13
RNF4-210ENST00000508235 IQCKQ8N0W5 287 aa14.25□□□□□ -0.13
RNF4-210ENST00000508235 METTL27Q8N6F8 245 aaPredicted RBP14.25□□□□□ -0.13
RNF4-210ENST00000508235 CCDC63Q8NA47 563 aa14.25□□□□□ -0.13
RNF4-210ENST00000508235 OR2Y1Q8NGV0 311 aa14.25□□□□□ -0.13
RNF4-210ENST00000508235 ZCCHC10Q8TBK6 192 aa14.25□□□□□ -0.13
RNF4-210ENST00000508235 PPP4R1Q8TF05 950 aa14.25□□□□□ -0.13
RNF4-210ENST00000508235 THAP4Q8WY91 577 aa14.25□□□□□ -0.13
RNF4-210ENST00000508235 CCT6BQ92526 530 aa14.25□□□□□ -0.13
RNF4-210ENST00000508235 NACC2Q96BF6 587 aa14.25□□□□□ -0.13
RNF4-210ENST00000508235 IP6K3Q96PC2 410 aa14.25□□□□□ -0.13
RNF4-210ENST00000508235 SMC6Q96SB8 1091 aa14.25□□□□□ -0.13
RNF4-210ENST00000508235 RUFY1Q96T51 708 aa14.25□□□□□ -0.13
RNF4-210ENST00000508235 MACROD1Q9BQ69 325 aa14.25□□□□□ -0.13
RNF4-210ENST00000508235 C1QTNF3Q9BXJ4 246 aa14.25□□□□□ -0.13
RNF4-210ENST00000508235 ERVK-6Q9BXR3 956 aa14.25□□□□□ -0.13
RNF4-210ENST00000508235 SLC6A16Q9GZN6 736 aa14.25□□□□□ -0.13
RNF4-210ENST00000508235 RHBGQ9H310 441 aa14.25□□□□□ -0.13
RNF4-210ENST00000508235 NOL11Q9H8H0 719 aaKnown RBP14.25□□□□□ -0.13
RNF4-210ENST00000508235 PRM3Q9NNZ6 103 aa14.25□□□□□ -0.13
RNF4-210ENST00000508235 MKKSQ9NPJ1 570 aaPredicted RBP14.25□□□□□ -0.13
RNF4-210ENST00000508235 SLC22A11Q9NSA0 550 aa14.25□□□□□ -0.13
RNF4-210ENST00000508235 C14orf105Q9NVL8 296 aa14.25□□□□□ -0.13
RNF4-210ENST00000508235 PCTPQ9UKL6 214 aa14.25□□□□□ -0.13
RNF4-210ENST00000508235 LHX6Q9UPM6 363 aa14.25□□□□□ -0.13
RNF4-210ENST00000508235 STK38LQ9Y2H1 464 aa14.25□□□□□ -0.13
RNF4-210ENST00000508235 PTRH2Q9Y3E5 179 aaKnown RBP14.25□□□□□ -0.13
RNF4-210ENST00000508235 MAP4K5Q9Y4K4 846 aa14.25□□□□□ -0.13
RNF4-210ENST00000508235 PCDHGA11Q9Y5H2 935 aa14.25□□□□□ -0.13
RNF4-210ENST00000508235 CCDC88CQ9P219 2028 aa14.24□□□□□ -0.13
RNF4-210ENST00000508235 A0A088AWK7 358 aa14.24□□□□□ -0.13
RNF4-210ENST00000508235 LRRC14BA6NHZ5 514 aa14.24□□□□□ -0.13
RNF4-210ENST00000508235 FOXO6A8MYZ6 492 aa14.24□□□□□ -0.13
RNF4-210ENST00000508235 RGS16O15492 202 aaPredicted RBP14.24□□□□□ -0.13
RNF4-210ENST00000508235 DLX3O60479 287 aa14.24□□□□□ -0.13
RNF4-210ENST00000508235 PRAMEF4O60810 478 aa14.24□□□□□ -0.13
RNF4-210ENST00000508235 KLF7O75840 302 aaPredicted RBP14.24□□□□□ -0.13
RNF4-210ENST00000508235 CLDN9O95484 217 aa14.24□□□□□ -0.13
RNF4-210ENST00000508235 OTCP00480 354 aa14.24□□□□□ -0.13
RNF4-210ENST00000508235 MYZAPP0CAP1 466 aa14.24□□□□□ -0.13
RNF4-210ENST00000508235 ATXN8OSP0DMR3 200 aa14.24□□□□□ -0.13
RNF4-210ENST00000508235 PRKAR1AP10644 381 aa14.24□□□□□ -0.13
RNF4-210ENST00000508235 ALOX12P18054 663 aa14.24□□□□□ -0.13
RNF4-210ENST00000508235 CD22P20273 847 aa14.24□□□□□ -0.13
RNF4-210ENST00000508235 ZNF10P21506 573 aaPredicted RBP14.24□□□□□ -0.13
RNF4-210ENST00000508235 CCNG1P51959 295 aa14.24□□□□□ -0.13
RNF4-210ENST00000508235 PRKAA2P54646 552 aa14.24□□□□□ -0.13
RNF4-210ENST00000508235 RPS18P62269 152 aaKnown RBP14.24□□□□□ -0.13
RNF4-210ENST00000508235 TGM3Q08188 693 aa14.24□□□□□ -0.13
RNF4-210ENST00000508235 PRAMEF9Q5VWM5 478 aa14.24□□□□□ -0.13
RNF4-210ENST00000508235 LRIG3Q6UXM1 1119 aa14.24□□□□□ -0.13
RNF4-210ENST00000508235 ZYG11AQ6WRX3 759 aa14.24□□□□□ -0.13
RNF4-210ENST00000508235 COX15Q7KZN9 410 aa14.24□□□□□ -0.13
RNF4-210ENST00000508235 LAS2Q8IYD9 372 aa14.24□□□□□ -0.13
RNF4-210ENST00000508235 C4orf33Q8N1A6 199 aa14.24□□□□□ -0.13
RNF4-210ENST00000508235 L3MBTL4Q8NA19 623 aa14.24□□□□□ -0.13
RNF4-210ENST00000508235 OR9A4Q8NGU2 314 aa14.24□□□□□ -0.13
RNF4-210ENST00000508235 CREB3L4Q8TEY5 395 aa14.24□□□□□ -0.13
RNF4-210ENST00000508235 ZNF483Q8TF39 744 aaPredicted RBP14.24□□□□□ -0.13
RNF4-210ENST00000508235 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.24□□□□□ -0.13
RNF4-210ENST00000508235 MIEF2Q96C03 454 aa14.24□□□□□ -0.13
RNF4-210ENST00000508235 MOCOSQ96EN8 888 aa14.24□□□□□ -0.13
RNF4-210ENST00000508235 CRELD1Q96HD1 420 aa14.24□□□□□ -0.13
RNF4-210ENST00000508235 APOPT1Q96IL0 206 aa14.24□□□□□ -0.13
RNF4-210ENST00000508235 VPS50Q96JG6 964 aa14.24□□□□□ -0.13
RNF4-210ENST00000508235 NTMT1Q9BV86 223 aa14.24□□□□□ -0.13
RNF4-210ENST00000508235 YIPF2Q9BWQ6 316 aa14.24□□□□□ -0.13
RNF4-210ENST00000508235 CLK4Q9HAZ1 481 aaKnown RBP14.24□□□□□ -0.13
RNF4-210ENST00000508235 RRAGDQ9NQL2 400 aaPredicted RBP14.24□□□□□ -0.13
RNF4-210ENST00000508235 TRPC4Q9UBN4 977 aa14.24□□□□□ -0.13
RNF4-210ENST00000508235 ZNF490Q9ULM2 529 aaPredicted RBP14.24□□□□□ -0.13
RNF4-210ENST00000508235 POLHQ9Y253 713 aa14.24□□□□□ -0.13
RNF4-210ENST00000508235 MRPS2Q9Y399 296 aaKnown RBP14.24□□□□□ -0.13
RNF4-210ENST00000508235 TSC22D4Q9Y3Q8 395 aa14.24□□□□□ -0.13
RNF4-210ENST00000508235 DMXL2Q8TDJ6 3036 aa14.24□□□□□ -0.13
RNF4-210ENST00000508235 IGLV3-12A0A075B6K2 115 aa14.23□□□□□ -0.13
RNF4-210ENST00000508235 CDC14CA4D256 554 aa14.23□□□□□ -0.13
RNF4-210ENST00000508235 H0YIV9 168 aa14.23□□□□□ -0.13
RNF4-210ENST00000508235 PLIN3O60664 434 aa14.23□□□□□ -0.13
RNF4-210ENST00000508235 SUPT7LO94864 414 aa14.23□□□□□ -0.13
RNF4-210ENST00000508235 KLHL18O94889 574 aa14.23□□□□□ -0.13
RNF4-210ENST00000508235 MLYCDO95822 493 aa14.23□□□□□ -0.13
RNF4-210ENST00000508235 IGHEP01854 428 aa14.23□□□□□ -0.13
RNF4-210ENST00000508235 PROCP04070 461 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms