RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 AP5B1Q2VPB7 878 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 PRTGQ2VWP7 1150 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 ADPRMQ3LIE5 342 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 AASDHQ4L235 1098 aaPredicted RBP5.68□□□□□ -1.5
USP39-213ENST00000467885 SPDYAQ5MJ70 313 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 WASHC2DQ5SRD0 308 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 C10orf62Q5T681 223 aaPredicted RBP5.68□□□□□ -1.5
USP39-213ENST00000467885 CDCP2Q5VXM1 449 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 DGLUCYQ7Z3D6 616 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 SPATA21Q7Z572 469 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 PRSS42Q7Z5A4 293 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 MYLK4Q86YV6 388 aaPredicted RBP5.68□□□□□ -1.5
USP39-213ENST00000467885 SLITRK4Q8IW52 837 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 KIRREL3Q8IZU9 778 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 D2HGDHQ8N465 521 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 GBP7Q8N8V2 638 aaPredicted RBP5.68□□□□□ -1.5
USP39-213ENST00000467885 AMER3Q8N944 861 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 ZNF511Q8NB15 262 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 KCT2Q8NC54 265 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 TRPV3Q8NET8 790 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 CEP70Q8NHQ1 597 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.68□□□□□ -1.5
USP39-213ENST00000467885 NT5CQ8TCD5 201 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 BCAS4Q8TDM0 211 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 C10orf82Q8WW14 230 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 SLC13A3Q8WWT9 602 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 SELENOMQ8WWX9 145 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 STON2Q8WXE9 905 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 UBE2E3Q969T4 207 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 CMTM7Q96FZ5 175 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 APIPQ96GX9 242 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 SEC16BQ96JE7 1060 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 HBEGFQ99075 208 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 DPYSL5Q9BPU6 564 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 CCDC28BQ9BUN5 200 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 MS4A8Q9BY19 250 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 ZNF717Q9BY31 904 aaPredicted RBP5.68□□□□□ -1.5
USP39-213ENST00000467885 ACPTQ9BZG2 426 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 OR51B5Q9H339 312 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 BRF2Q9HAW0 419 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 LHX9Q9NQ69 397 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.68□□□□□ -1.5
USP39-213ENST00000467885 HEY2Q9UBP5 337 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 VPS29Q9UBQ0 182 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 FTSJ1Q9UET6 329 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 GIMAP2Q9UG22 337 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 PLCL2Q9UPR0 1127 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 APOBEC2Q9Y235 224 aaKnown RBP5.68□□□□□ -1.5
USP39-213ENST00000467885 FIS1Q9Y3D6 152 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 PCDHGA1Q9Y5H4 931 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 TDRD6O60522 2096 aaKnown RBP5.68□□□□□ -1.5
USP39-213ENST00000467885 ARHGEF17Q96PE2 2063 aaPredicted RBP5.68□□□□□ -1.5
USP39-213ENST00000467885 MN1Q10571 1320 aaPredicted RBP5.68□□□□□ -1.5
USP39-213ENST00000467885 LRP4O75096 1905 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 PI4KAP42356 2102 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 CUL9Q8IWT3 2517 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 DNAH14Q0VDD8 3507 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 A0A0G2JND7 137 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 GOLGA8QA0A0J9YX86 632 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 GOLGA8OA6NCC3 632 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 TLCD2A6NGC4 264 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 GOLGA8NF8WBI6 632 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 GIPC1O14908 333 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 HGSO14964 777 aaPredicted RBP5.67□□□□□ -1.5
USP39-213ENST00000467885 ANKRD28O15084 1053 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 LSM1O15116 133 aaKnown RBP5.67□□□□□ -1.5
USP39-213ENST00000467885 RGS14O43566 566 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 DUX1O43812 170 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 DIAPH2O60879 1101 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 VPS4BO75351 444 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 SEC22BO75396 215 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 CRCPO75575 148 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 MED26O95402 600 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 ANKRD34CP0C6C1 535 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 TROVE2P10155 538 aaKnown RBP eCLIP5.67□□□□□ -1.5
USP39-213ENST00000467885 THRAP10827 490 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 PCNAP12004 261 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 HSD3B1P14060 373 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 EZRP15311 586 aaKnown RBP5.67□□□□□ -1.5
USP39-213ENST00000467885 CSRP1P21291 193 aaKnown RBP5.67□□□□□ -1.5
USP39-213ENST00000467885 HSD3B2P26439 372 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 HNRNPH1P31943 449 aaKnown RBP5.67□□□□□ -1.5
USP39-213ENST00000467885 BSGP35613 385 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 GRK3P35626 688 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 ARL1P40616 181 aaPredicted RBP5.67□□□□□ -1.5
USP39-213ENST00000467885 SEPHS1P49903 392 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 PWP1Q13610 501 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 KCNAB1Q14722 419 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 PDCD2Q16342 344 aaPredicted RBP5.67□□□□□ -1.5
USP39-213ENST00000467885 INAVAQ3KP66 663 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 ZC3H12BQ5HYM0 836 aaKnown RBP5.67□□□□□ -1.5
USP39-213ENST00000467885 SNAP47Q5SQN1 464 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 KHDRBS2Q5VWX1 349 aaKnown RBP5.67□□□□□ -1.5
USP39-213ENST00000467885 TMEM198Q66K66 360 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 OR4C11Q6IEV9 310 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 OGFOD2Q6N063 350 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 GALNT18Q6P9A2 607 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 ABHD17CQ6PCB6 329 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 C6orf89Q6UWU4 347 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 RNF44Q7L0R7 432 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms