RNA–Protein interactions for RNA: ENST00000379792.6

HERPUD1-203, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5 BASIC

Gene HERPUD1, Length 1,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-203ENST00000379792 HEY2Q9UBP5 337 aa13.47□□□□□ -0.25
HERPUD1-203ENST00000379792 VPS29Q9UBQ0 182 aa13.47□□□□□ -0.25
HERPUD1-203ENST00000379792 APOBEC2Q9Y235 224 aaKnown RBP13.47□□□□□ -0.25
HERPUD1-203ENST00000379792 ARL2BPQ9Y2Y0 163 aa13.47□□□□□ -0.25
HERPUD1-203ENST00000379792 TSC22D4Q9Y3Q8 395 aa13.47□□□□□ -0.25
HERPUD1-203ENST00000379792 A0A0G2JN53 185 aa13.46□□□□□ -0.25
HERPUD1-203ENST00000379792 CLEC3AO75596 197 aa13.46□□□□□ -0.25
HERPUD1-203ENST00000379792 FOLR1P15328 257 aa13.46□□□□□ -0.25
HERPUD1-203ENST00000379792 CSRP1P21291 193 aaKnown RBP13.46□□□□□ -0.25
HERPUD1-203ENST00000379792 PTX3P26022 381 aaPredicted RBP13.46□□□□□ -0.25
HERPUD1-203ENST00000379792 SNRPNP63162 240 aaKnown RBP13.46□□□□□ -0.25
HERPUD1-203ENST00000379792 RELAQ04206 551 aa13.46□□□□□ -0.25
HERPUD1-203ENST00000379792 HYAL2Q12891 473 aa13.46□□□□□ -0.25
HERPUD1-203ENST00000379792 GPR19Q15760 415 aa13.46□□□□□ -0.25
HERPUD1-203ENST00000379792 HKDC1Q2TB90 917 aa13.46□□□□□ -0.25
HERPUD1-203ENST00000379792 ATP6AP1LQ52LC2 224 aa13.46□□□□□ -0.25
HERPUD1-203ENST00000379792 RFTN2Q52LD8 501 aaPredicted RBP13.46□□□□□ -0.25
HERPUD1-203ENST00000379792 C6orf136Q5SQH8 315 aa13.46□□□□□ -0.25
HERPUD1-203ENST00000379792 RIPOR1Q6ZS17 1223 aa13.46□□□□□ -0.25
HERPUD1-203ENST00000379792 RNF165Q6ZSG1 346 aa13.46□□□□□ -0.25
HERPUD1-203ENST00000379792 ARHGAP22Q7Z5H3 698 aa13.46□□□□□ -0.25
HERPUD1-203ENST00000379792 TRPV3Q8NET8 790 aa13.46□□□□□ -0.25
HERPUD1-203ENST00000379792 TTLQ8NG68 377 aa13.46□□□□□ -0.25
HERPUD1-203ENST00000379792 CEP70Q8NHQ1 597 aa13.46□□□□□ -0.25
HERPUD1-203ENST00000379792 ACTRT2Q8TDY3 377 aa13.46□□□□□ -0.25
HERPUD1-203ENST00000379792 KLHL6Q8WZ60 621 aa13.46□□□□□ -0.25
HERPUD1-203ENST00000379792 RERGQ96A58 199 aaPredicted RBP13.46□□□□□ -0.25
HERPUD1-203ENST00000379792 CMTM7Q96FZ5 175 aa13.46□□□□□ -0.25
HERPUD1-203ENST00000379792 SLC41A2Q96JW4 573 aa13.46□□□□□ -0.25
HERPUD1-203ENST00000379792 C1orf50Q9BV19 199 aa13.46□□□□□ -0.25
HERPUD1-203ENST00000379792 TOR4AQ9NXH8 423 aa13.46□□□□□ -0.25
HERPUD1-203ENST00000379792 SEMA5BQ9P283 1151 aa13.46□□□□□ -0.25
HERPUD1-203ENST00000379792 PDP2Q9P2J9 529 aa13.46□□□□□ -0.25
HERPUD1-203ENST00000379792 ADGRE2Q9UHX3 823 aa13.46□□□□□ -0.25
HERPUD1-203ENST00000379792 SPAARA0A1B0GVQ0 90 aa13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 SERTM1A2A2V5 107 aa13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 LRIT2A6NDA9 550 aa13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 RTCAO00442 366 aaKnown RBP13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 MAP3K7O43318 606 aa13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 RFPL3O75679 317 aa13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 B3GALT4O96024 378 aa13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 THRAP10827 490 aa13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 LBPP18428 481 aa13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 NELFEP18615 380 aaKnown RBP13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 NCF2P19878 526 aaPredicted RBP13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 GABRA4P48169 554 aa13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 ZNF33BQ06732 778 aa13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 TERF2Q15554 542 aa13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 ZC3H12BQ5HYM0 836 aaKnown RBP13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 TOR1AIP1Q5JTV8 583 aa13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 WASHC2DQ5SRD0 308 aa13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 C10orf62Q5T681 223 aaPredicted RBP13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 DEPDC1Q5TB30 811 aa13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 KHDRBS2Q5VWX1 349 aaKnown RBP13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 SLITRK4Q8IW52 837 aa13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 CACNA2D3Q8IZS8 1091 aa13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 FNDC5Q8NAU1 212 aa13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 WDR48Q8TAF3 677 aa13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 TM4SF19Q96DZ7 209 aa13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 RNF31Q96EP0 1072 aa13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 CATSPER2Q96P56 530 aa13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 SERPINI1Q99574 410 aa13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 DPYSL5Q9BPU6 564 aa13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 CCDC28BQ9BUN5 200 aa13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 SPRTNQ9H040 489 aaPredicted RBP13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 ZNF768Q9H5H4 540 aaKnown RBP13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 C1orf109Q9NX04 203 aa13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 C4orf51C9J302 202 aa13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 VPS4BO75351 444 aa13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 RSL1D1O76021 490 aaKnown RBP13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 GBAP04062 536 aa13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 SERPINA6P08185 405 aa13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 PRR35P0CG20 571 aa13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 HSD3B1P14060 373 aa13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 HSD3B2P26439 372 aa13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 SERPINB1P30740 379 aa13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 PLA2G16P53816 162 aa13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 RPL38P63173 70 aaKnown RBP13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 TBL3Q12788 808 aaKnown RBP13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 CHSY3Q70JA7 882 aa13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 UBE3DQ7Z6J8 389 aa13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 SLCO6A1Q86UG4 719 aa13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 CARFQ8N187 725 aa13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 D2HGDHQ8N465 521 aa13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 C1orf52Q8N6N3 182 aaKnown RBP13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 CSNK1A1LQ8N752 337 aa13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 N4BP2L2Q92802 583 aaPredicted RBP13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 THAP11Q96EK4 314 aa13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 SLC45A3Q96JT2 553 aa13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 PPP3R2Q96LZ3 170 aa13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 IRAK4Q9NWZ3 460 aa13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 PLCL2Q9UPR0 1127 aa13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 MRPS2Q9Y399 296 aaKnown RBP13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 POLR3HQ9Y535 204 aaPredicted RBP13.45□□□□□ -0.26
HERPUD1-203ENST00000379792 TOX3O15405 576 aaPredicted RBP13.44□□□□□ -0.26
HERPUD1-203ENST00000379792 KCNK5O95279 499 aa13.44□□□□□ -0.26
HERPUD1-203ENST00000379792 ALDOCP09972 364 aaKnown RBP13.44□□□□□ -0.26
HERPUD1-203ENST00000379792 PDX1P52945 283 aa13.44□□□□□ -0.26
HERPUD1-203ENST00000379792 DIO3P55073 304 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 363.9 ms