RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 S100ZQ8WXG8 99 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 FATE1Q969F0 183 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 ART5Q96L15 291 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 BRINP2Q9C0B6 783 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 REEP4Q9H6H4 257 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 SLC28A3Q9HAS3 691 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 STOX2Q9P2F5 926 aaPredicted RBP8.17□□□□□ -1.1
PTPRK-206ENST00000368215 ERVK-18Q9QC07 812 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 PCDHA9Q9Y5H5 950 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 URB1O60287 2271 aaKnown RBP8.16□□□□□ -1.1
PTPRK-206ENST00000368215 ARHGEF33A8MVX0 844 aa8.16□□□□□ -1.1
PTPRK-206ENST00000368215 EFCAB9A8MZ26 197 aa8.16□□□□□ -1.1
PTPRK-206ENST00000368215 BMP10O95393 424 aa8.16□□□□□ -1.1
PTPRK-206ENST00000368215 IGLV3-27P01718 113 aa8.16□□□□□ -1.1
PTPRK-206ENST00000368215 ANXA8P13928 327 aa8.16□□□□□ -1.1
PTPRK-206ENST00000368215 IGFBP4P22692 258 aa8.16□□□□□ -1.1
PTPRK-206ENST00000368215 AZGP1P25311 298 aaKnown RBP8.16□□□□□ -1.1
PTPRK-206ENST00000368215 PDHA2P29803 388 aa8.16□□□□□ -1.1
PTPRK-206ENST00000368215 FEN1P39748 380 aaKnown RBP8.16□□□□□ -1.1
PTPRK-206ENST00000368215 LRRC32Q14392 662 aa8.16□□□□□ -1.1
PTPRK-206ENST00000368215 TIGD6Q17RP2 521 aa8.16□□□□□ -1.1
PTPRK-206ENST00000368215 RNF111Q6ZNA4 994 aa8.16□□□□□ -1.1
PTPRK-206ENST00000368215 PLEKHM3Q6ZWE6 761 aa8.16□□□□□ -1.1
PTPRK-206ENST00000368215 VN1R5Q7Z5H4 357 aa8.16□□□□□ -1.1
PTPRK-206ENST00000368215 NUDT13Q86X67 352 aa8.16□□□□□ -1.1
PTPRK-206ENST00000368215 CHERPQ8IWX8 916 aaKnown RBP8.16□□□□□ -1.1
PTPRK-206ENST00000368215 GOLM1Q8NBJ4 401 aa8.16□□□□□ -1.1
PTPRK-206ENST00000368215 C1GALT1C1Q96EU7 318 aa8.16□□□□□ -1.1
PTPRK-206ENST00000368215 WDR12Q9GZL7 423 aaKnown RBP8.16□□□□□ -1.1
PTPRK-206ENST00000368215 CARS2Q9HA77 564 aaKnown RBP8.16□□□□□ -1.1
PTPRK-206ENST00000368215 MRPS30Q9NP92 439 aaKnown RBP8.16□□□□□ -1.1
PTPRK-206ENST00000368215 MAT2BQ9NZL9 334 aa8.16□□□□□ -1.1
PTPRK-206ENST00000368215 CD300AQ9UGN4 299 aa8.16□□□□□ -1.1
PTPRK-206ENST00000368215 OR10H2O60403 315 aa8.16□□□□□ -1.1
PTPRK-206ENST00000368215 CBFA2T3O75081 653 aa8.16□□□□□ -1.1
PTPRK-206ENST00000368215 C1GALT1C1LP0DN25 315 aa8.16□□□□□ -1.1
PTPRK-206ENST00000368215 CR2P20023 1033 aa8.16□□□□□ -1.1
PTPRK-206ENST00000368215 PTNP21246 168 aa8.16□□□□□ -1.1
PTPRK-206ENST00000368215 ZNF10P21506 573 aaPredicted RBP8.16□□□□□ -1.1
PTPRK-206ENST00000368215 AGXTP21549 392 aa8.16□□□□□ -1.1
PTPRK-206ENST00000368215 HLCSP50747 726 aa8.16□□□□□ -1.1
PTPRK-206ENST00000368215 RGS8P57771 180 aaPredicted RBP8.16□□□□□ -1.1
PTPRK-206ENST00000368215 ACVR1Q04771 509 aa8.16□□□□□ -1.1
PTPRK-206ENST00000368215 CD47Q08722 323 aa8.16□□□□□ -1.1
PTPRK-206ENST00000368215 UGT3A2Q3SY77 523 aa8.16□□□□□ -1.1
PTPRK-206ENST00000368215 ATAT1Q5SQI0 421 aa8.16□□□□□ -1.1
PTPRK-206ENST00000368215 HMBOX1Q6NT76 420 aa8.16□□□□□ -1.1
PTPRK-206ENST00000368215 JPH3Q8WXH2 748 aaPredicted RBP8.16□□□□□ -1.1
PTPRK-206ENST00000368215 BADQ92934 168 aa8.16□□□□□ -1.1
PTPRK-206ENST00000368215 SLC38A2Q96QD8 506 aa8.16□□□□□ -1.1
PTPRK-206ENST00000368215 F2RL3Q96RI0 385 aa8.16□□□□□ -1.1
PTPRK-206ENST00000368215 ZNF347Q96SE7 839 aa8.16□□□□□ -1.1
PTPRK-206ENST00000368215 POLR2J3Q9H1A7 115 aaKnown RBP8.16□□□□□ -1.1
PTPRK-206ENST00000368215 TRIM39Q9HCM9 518 aa8.16□□□□□ -1.1
PTPRK-206ENST00000368215 DNAAF2Q9NVR5 837 aaKnown RBP8.16□□□□□ -1.1
PTPRK-206ENST00000368215 C5AR2Q9P296 337 aa8.16□□□□□ -1.1
PTPRK-206ENST00000368215 CDV3Q9UKY7 258 aaKnown RBP8.16□□□□□ -1.1
PTPRK-206ENST00000368215 HIDE1A8MVS5 230 aa8.16□□□□□ -1.1
PTPRK-206ENST00000368215 WASH3PC4AMC7 463 aa8.16□□□□□ -1.1
PTPRK-206ENST00000368215 MFN2O95140 757 aa8.16□□□□□ -1.1
PTPRK-206ENST00000368215 ZDHHC11BP0C7U3 371 aa8.16□□□□□ -1.1
PTPRK-206ENST00000368215 C6P13671 934 aa8.16□□□□□ -1.1
PTPRK-206ENST00000368215 AMD1P17707 334 aa8.16□□□□□ -1.1
PTPRK-206ENST00000368215 DCTP40126 519 aa8.16□□□□□ -1.1
PTPRK-206ENST00000368215 VRK3Q8IV63 474 aa8.16□□□□□ -1.1
PTPRK-206ENST00000368215 TMEM151AQ8N4L1 468 aa8.16□□□□□ -1.1
PTPRK-206ENST00000368215 AQP11Q8NBQ7 271 aa8.16□□□□□ -1.1
PTPRK-206ENST00000368215 C19orf18Q8NEA5 215 aa8.16□□□□□ -1.1
PTPRK-206ENST00000368215 OR7G3Q8NG95 312 aa8.16□□□□□ -1.1
PTPRK-206ENST00000368215 RERGQ96A58 199 aaPredicted RBP8.16□□□□□ -1.1
PTPRK-206ENST00000368215 COX4I2Q96KJ9 171 aa8.16□□□□□ -1.1
PTPRK-206ENST00000368215 LMLNQ96KR4 655 aa8.16□□□□□ -1.1
PTPRK-206ENST00000368215 RAD9AQ99638 391 aa8.16□□□□□ -1.1
PTPRK-206ENST00000368215 C17orf62Q9BQA9 187 aa8.16□□□□□ -1.1
PTPRK-206ENST00000368215 CWH43Q9H720 699 aa8.16□□□□□ -1.1
PTPRK-206ENST00000368215 SPATA7Q9P0W8 599 aa8.16□□□□□ -1.1
PTPRK-206ENST00000368215 FEZF1A0PJY2 475 aa8.15□□□□□ -1.1
PTPRK-206ENST00000368215 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.15□□□□□ -1.1
PTPRK-206ENST00000368215 NR2F6P10588 404 aa8.15□□□□□ -1.1
PTPRK-206ENST00000368215 ACTR1BP42025 376 aa8.15□□□□□ -1.1
PTPRK-206ENST00000368215 ACTR1AP61163 376 aa8.15□□□□□ -1.1
PTPRK-206ENST00000368215 PTSQ03393 145 aa8.15□□□□□ -1.1
PTPRK-206ENST00000368215 GNA13Q14344 377 aa8.15□□□□□ -1.1
PTPRK-206ENST00000368215 MYBPC3Q14896 1274 aa8.15□□□□□ -1.1
PTPRK-206ENST00000368215 SLC14A2Q15849 920 aa8.15□□□□□ -1.1
PTPRK-206ENST00000368215 KIAA1614Q5VZ46 1190 aa8.15□□□□□ -1.1
PTPRK-206ENST00000368215 ZNF554Q86TJ5 538 aa8.15□□□□□ -1.1
PTPRK-206ENST00000368215 SMPDL3AQ92484 453 aa8.15□□□□□ -1.1
PTPRK-206ENST00000368215 HDAC2Q92769 488 aaKnown RBP8.15□□□□□ -1.1
PTPRK-206ENST00000368215 RNFT2Q96EX2 444 aa8.15□□□□□ -1.1
PTPRK-206ENST00000368215 NTMT1Q9BV86 223 aa8.15□□□□□ -1.1
PTPRK-206ENST00000368215 GTF2A1LQ9UNN4 478 aa8.15□□□□□ -1.1
PTPRK-206ENST00000368215 BTBD3Q9Y2F9 522 aa8.15□□□□□ -1.1
PTPRK-206ENST00000368215 PCDHB11Q9Y5F2 797 aa8.15□□□□□ -1.1
PTPRK-206ENST00000368215 SLC16A5O15375 505 aa8.15□□□□□ -1.1
PTPRK-206ENST00000368215 ARHGEF9O43307 516 aa8.15□□□□□ -1.1
PTPRK-206ENST00000368215 ASNA1O43681 348 aa8.15□□□□□ -1.1
PTPRK-206ENST00000368215 ABLIM3O94929 683 aa8.15□□□□□ -1.1
PTPRK-206ENST00000368215 IFNA16P05015 189 aa8.15□□□□□ -1.1
PTPRK-206ENST00000368215 C1SP09871 688 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms