RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 HPS6Q86YV9 775 aa14.08□□□□□ -0.16
CXCL12-201ENST00000343575 SLC45A3Q96JT2 553 aa14.08□□□□□ -0.16
CXCL12-201ENST00000343575 PPM1MQ96MI6 270 aa14.08□□□□□ -0.16
CXCL12-201ENST00000343575 TSC22D4Q9Y3Q8 395 aa14.08□□□□□ -0.16
CXCL12-201ENST00000343575 AP4B1Q9Y6B7 739 aa14.08□□□□□ -0.16
CXCL12-201ENST00000343575 FRYLO94915 3013 aa14.08□□□□□ -0.16
CXCL12-201ENST00000343575 CACNA1HO95180 2353 aa14.08□□□□□ -0.16
CXCL12-201ENST00000343575 FEZF1A0PJY2 475 aa14.08□□□□□ -0.16
CXCL12-201ENST00000343575 CCDC160A6NGH7 325 aa14.08□□□□□ -0.16
CXCL12-201ENST00000343575 ISM1B1AKI9 464 aa14.08□□□□□ -0.16
CXCL12-201ENST00000343575 SLC28A1O00337 649 aa14.08□□□□□ -0.16
CXCL12-201ENST00000343575 GALR2O43603 387 aaPredicted RBP14.08□□□□□ -0.16
CXCL12-201ENST00000343575 OR6B1O95007 311 aa14.08□□□□□ -0.16
CXCL12-201ENST00000343575 UGT2B7P16662 529 aa14.08□□□□□ -0.16
CXCL12-201ENST00000343575 PRPH2P23942 346 aa14.08□□□□□ -0.16
CXCL12-201ENST00000343575 EPHA8P29322 1005 aaPredicted RBP14.08□□□□□ -0.16
CXCL12-201ENST00000343575 LSSP48449 732 aa14.08□□□□□ -0.16
CXCL12-201ENST00000343575 CCR8P51685 355 aa14.08□□□□□ -0.16
CXCL12-201ENST00000343575 ERVK-8P63133 956 aa14.08□□□□□ -0.16
CXCL12-201ENST00000343575 REEP5Q00765 189 aa14.08□□□□□ -0.16
CXCL12-201ENST00000343575 ZNF33BQ06732 778 aa14.08□□□□□ -0.16
CXCL12-201ENST00000343575 NR6A1Q15406 480 aa14.08□□□□□ -0.16
CXCL12-201ENST00000343575 SF1Q15637 639 aaKnown RBP14.08□□□□□ -0.16
CXCL12-201ENST00000343575 ATP6AP1LQ52LC2 224 aa14.08□□□□□ -0.16
CXCL12-201ENST00000343575 C6orf132Q5T0Z8 1188 aa14.08□□□□□ -0.16
CXCL12-201ENST00000343575 ZNF425Q6IV72 752 aa14.08□□□□□ -0.16
CXCL12-201ENST00000343575 TMIGD1Q6UXZ0 262 aa14.08□□□□□ -0.16
CXCL12-201ENST00000343575 GATAD2AQ86YP4 633 aa14.08□□□□□ -0.16
CXCL12-201ENST00000343575 PLD3Q8IV08 490 aa14.08□□□□□ -0.16
CXCL12-201ENST00000343575 ERI1Q8IV48 349 aaKnown RBP14.08□□□□□ -0.16
CXCL12-201ENST00000343575 KYQ8NBH2 561 aa14.08□□□□□ -0.16
CXCL12-201ENST00000343575 OR2I1PQ8NGU4 316 aa14.08□□□□□ -0.16
CXCL12-201ENST00000343575 RP9Q8TA86 221 aaKnown RBP14.08□□□□□ -0.16
CXCL12-201ENST00000343575 SAP25Q8TEE9 199 aa14.08□□□□□ -0.16
CXCL12-201ENST00000343575 RSC1A1Q92681 617 aa14.08□□□□□ -0.16
CXCL12-201ENST00000343575 C11orf24Q96F05 449 aaPredicted RBP14.08□□□□□ -0.16
CXCL12-201ENST00000343575 APIPQ96GX9 242 aa14.08□□□□□ -0.16
CXCL12-201ENST00000343575 DPH7Q9BTV6 452 aa14.08□□□□□ -0.16
CXCL12-201ENST00000343575 C1orf50Q9BV19 199 aa14.08□□□□□ -0.16
CXCL12-201ENST00000343575 MRPS30Q9NP92 439 aaKnown RBP14.08□□□□□ -0.16
CXCL12-201ENST00000343575 EVA1BQ9NVM1 165 aa14.08□□□□□ -0.16
CXCL12-201ENST00000343575 RIC8BQ9NVN3 520 aa14.08□□□□□ -0.16
CXCL12-201ENST00000343575 GPR45Q9Y5Y3 372 aa14.08□□□□□ -0.16
CXCL12-201ENST00000343575 ASXL3Q9C0F0 2248 aa14.07□□□□□ -0.16
CXCL12-201ENST00000343575 FAM221BA6H8Z2 402 aa14.07□□□□□ -0.16
CXCL12-201ENST00000343575 TNFRSF10AO00220 468 aa14.07□□□□□ -0.16
CXCL12-201ENST00000343575 TRMUO75648 421 aaKnown RBP14.07□□□□□ -0.16
CXCL12-201ENST00000343575 CFIP05156 583 aa14.07□□□□□ -0.16
CXCL12-201ENST00000343575 CDK4P11802 303 aa14.07□□□□□ -0.16
CXCL12-201ENST00000343575 GRIA3P42263 894 aa14.07□□□□□ -0.16
CXCL12-201ENST00000343575 ARRB1P49407 418 aaPredicted RBP14.07□□□□□ -0.16
CXCL12-201ENST00000343575 ABATP80404 500 aa14.07□□□□□ -0.16
CXCL12-201ENST00000343575 EMX2Q04743 252 aa14.07□□□□□ -0.16
CXCL12-201ENST00000343575 DDX39BQ13838 428 aaKnown RBP14.07□□□□□ -0.16
CXCL12-201ENST00000343575 KIR2DS3Q14952 304 aa14.07□□□□□ -0.16
CXCL12-201ENST00000343575 C14orf28Q4W4Y0 310 aa14.07□□□□□ -0.16
CXCL12-201ENST00000343575 SLC23A3Q6PIS1 610 aa14.07□□□□□ -0.16
CXCL12-201ENST00000343575 BNC2Q6ZN30 1099 aaPredicted RBP14.07□□□□□ -0.16
CXCL12-201ENST00000343575 SLC35F3Q8IY50 421 aa14.07□□□□□ -0.16
CXCL12-201ENST00000343575 OR10G6Q8NH81 332 aa14.07□□□□□ -0.16
CXCL12-201ENST00000343575 ZFP28Q8NHY6 868 aa14.07□□□□□ -0.16
CXCL12-201ENST00000343575 SMOC1Q9H4F8 434 aa14.07□□□□□ -0.16
CXCL12-201ENST00000343575 UCK1Q9HA47 277 aa14.07□□□□□ -0.16
CXCL12-201ENST00000343575 PFDN4Q9NQP4 134 aa14.07□□□□□ -0.16
CXCL12-201ENST00000343575 AIG1Q9NVV5 245 aa14.07□□□□□ -0.16
CXCL12-201ENST00000343575 ACTR10Q9NZ32 417 aa14.07□□□□□ -0.16
CXCL12-201ENST00000343575 R4GN57 208 aa14.07□□□□□ -0.16
CXCL12-201ENST00000343575 MDC1Q14676 2089 aaKnown RBP14.06□□□□□ -0.16
CXCL12-201ENST00000343575 A0A0J9YVX5 310 aa14.06□□□□□ -0.16
CXCL12-201ENST00000343575 TTC36A6NLP5 189 aa14.06□□□□□ -0.16
CXCL12-201ENST00000343575 RGS14O43566 566 aa14.06□□□□□ -0.16
CXCL12-201ENST00000343575 RSL1D1O76021 490 aaKnown RBP14.06□□□□□ -0.16
CXCL12-201ENST00000343575 PCNAP12004 261 aa14.06□□□□□ -0.16
CXCL12-201ENST00000343575 MYF5P13349 255 aa14.06□□□□□ -0.16
CXCL12-201ENST00000343575 GPX3P22352 226 aa14.06□□□□□ -0.16
CXCL12-201ENST00000343575 ERFP50548 548 aa14.06□□□□□ -0.16
CXCL12-201ENST00000343575 RPS13P62277 151 aaKnown RBP14.06□□□□□ -0.16
CXCL12-201ENST00000343575 LAPTM5Q13571 262 aa14.06□□□□□ -0.16
CXCL12-201ENST00000343575 TRIM61Q5EBN2 209 aa14.06□□□□□ -0.16
CXCL12-201ENST00000343575 PAGE2BQ5JRK9 111 aa14.06□□□□□ -0.16
CXCL12-201ENST00000343575 FUNDC1Q8IVP5 155 aa14.06□□□□□ -0.16
CXCL12-201ENST00000343575 FNDC5Q8NAU1 212 aa14.06□□□□□ -0.16
CXCL12-201ENST00000343575 OR9I1Q8NGQ6 314 aa14.06□□□□□ -0.16
CXCL12-201ENST00000343575 TEX37Q96LM6 180 aa14.06□□□□□ -0.16
CXCL12-201ENST00000343575 PPP3R2Q96LZ3 170 aa14.06□□□□□ -0.16
CXCL12-201ENST00000343575 BRINP2Q9C0B6 783 aa14.06□□□□□ -0.16
CXCL12-201ENST00000343575 RHBGQ9H310 441 aa14.06□□□□□ -0.16
CXCL12-201ENST00000343575 ACTL8Q9H568 366 aa14.06□□□□□ -0.16
CXCL12-201ENST00000343575 GAREM1Q9H706 876 aa14.06□□□□□ -0.16
CXCL12-201ENST00000343575 BRF2Q9HAW0 419 aa14.06□□□□□ -0.16
CXCL12-201ENST00000343575 LRTM1Q9HBL6 345 aa14.06□□□□□ -0.16
CXCL12-201ENST00000343575 SDR39U1Q9NRG7 319 aaPredicted RBP14.06□□□□□ -0.16
CXCL12-201ENST00000343575 TMEM184CQ9NVA4 438 aa14.06□□□□□ -0.16
CXCL12-201ENST00000343575 HRASLS2Q9NWW9 162 aa14.06□□□□□ -0.16
CXCL12-201ENST00000343575 C1orf109Q9NX04 203 aa14.06□□□□□ -0.16
CXCL12-201ENST00000343575 RIMS3Q9UJD0 308 aa14.06□□□□□ -0.16
CXCL12-201ENST00000343575 SPEGQ15772 3267 aa14.06□□□□□ -0.16
CXCL12-201ENST00000343575 OR5K3A6NET4 321 aa14.06□□□□□ -0.16
CXCL12-201ENST00000343575 FOXE1O00358 373 aaPredicted RBP14.06□□□□□ -0.16
CXCL12-201ENST00000343575 TRIM38O00635 465 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms