RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 HCN3Q9P1Z3 774 aa16.75■□□□□ 0.27
HDDC3-201ENST00000330334 TEKT2Q9UIF3 430 aa16.75■□□□□ 0.27
HDDC3-201ENST00000330334 ERRFI1Q9UJM3 462 aaPredicted RBP16.75■□□□□ 0.27
HDDC3-201ENST00000330334 IKZF3Q9UKT9 509 aa16.75■□□□□ 0.27
HDDC3-201ENST00000330334 SNX24Q9Y343 169 aa16.75■□□□□ 0.27
HDDC3-201ENST00000330334 NAALAD2Q9Y3Q0 740 aa16.75■□□□□ 0.27
HDDC3-201ENST00000330334 OARD1Q9Y530 152 aa16.75■□□□□ 0.27
HDDC3-201ENST00000330334 KCNE2Q9Y6J6 123 aa16.75■□□□□ 0.27
HDDC3-201ENST00000330334 EIF3HO15372 352 aaKnown RBP eCLIP16.74■□□□□ 0.27
HDDC3-201ENST00000330334 NDUFS4O43181 175 aa16.74■□□□□ 0.27
HDDC3-201ENST00000330334 GALR3O60755 368 aaPredicted RBP16.74■□□□□ 0.27
HDDC3-201ENST00000330334 LDLRP01130 860 aa16.74■□□□□ 0.27
HDDC3-201ENST00000330334 MYBL2P10244 700 aa16.74■□□□□ 0.27
HDDC3-201ENST00000330334 ITGAMP11215 1152 aa16.74■□□□□ 0.27
HDDC3-201ENST00000330334 ALOX12P18054 663 aa16.74■□□□□ 0.27
HDDC3-201ENST00000330334 RGS1Q08116 209 aa16.74■□□□□ 0.27
HDDC3-201ENST00000330334 CATSPEREQ5SY80 951 aa16.74■□□□□ 0.27
HDDC3-201ENST00000330334 ZNF324BQ6AW86 544 aaPredicted RBP16.74■□□□□ 0.27
HDDC3-201ENST00000330334 H3F3CQ6NXT2 135 aa16.74■□□□□ 0.27
HDDC3-201ENST00000330334 ANKRD37Q7Z713 158 aa16.74■□□□□ 0.27
HDDC3-201ENST00000330334 THOC6Q86W42 341 aaKnown RBP16.74■□□□□ 0.27
HDDC3-201ENST00000330334 KLHDC8AQ8IYD2 350 aa16.74■□□□□ 0.27
HDDC3-201ENST00000330334 ZBED8Q8IZ13 594 aa16.74■□□□□ 0.27
HDDC3-201ENST00000330334 BCORP1Q8N888 145 aa16.74■□□□□ 0.27
HDDC3-201ENST00000330334 ZCCHC10Q8TBK6 192 aa16.74■□□□□ 0.27
HDDC3-201ENST00000330334 PYROXD1Q8WU10 500 aa16.74■□□□□ 0.27
HDDC3-201ENST00000330334 SLX1AQ9BQ83 275 aa16.74■□□□□ 0.27
HDDC3-201ENST00000330334 STMN3Q9NZ72 180 aa16.74■□□□□ 0.27
HDDC3-201ENST00000330334 URADA6NGE7 173 aa16.73■□□□□ 0.27
HDDC3-201ENST00000330334 MAGEB17A8MXT2 336 aa16.73■□□□□ 0.27
HDDC3-201ENST00000330334 CDC7O00311 574 aa16.73■□□□□ 0.27
HDDC3-201ENST00000330334 E2F3O00716 465 aa16.73■□□□□ 0.27
HDDC3-201ENST00000330334 RDH16O75452 317 aa16.73■□□□□ 0.27
HDDC3-201ENST00000330334 CELA2AP08217 269 aa16.73■□□□□ 0.27
HDDC3-201ENST00000330334 POU4F1Q01851 419 aa16.73■□□□□ 0.27
HDDC3-201ENST00000330334 MEF2AQ02078 507 aaPredicted RBP16.73■□□□□ 0.27
HDDC3-201ENST00000330334 RHAGQ02094 409 aa16.73■□□□□ 0.27
HDDC3-201ENST00000330334 CALCOCO2Q13137 446 aa16.73■□□□□ 0.27
HDDC3-201ENST00000330334 EXT1Q16394 746 aa16.73■□□□□ 0.27
HDDC3-201ENST00000330334 ABHD17BQ5VST6 288 aa16.73■□□□□ 0.27
HDDC3-201ENST00000330334 NXPE4Q6UWF7 544 aa16.73■□□□□ 0.27
HDDC3-201ENST00000330334 FAM180AQ6UWF9 173 aa16.73■□□□□ 0.27
HDDC3-201ENST00000330334 ABHD13Q7L211 337 aa16.73■□□□□ 0.27
HDDC3-201ENST00000330334 ADAMTSL2Q86TH1 951 aa16.73■□□□□ 0.27
HDDC3-201ENST00000330334 TRPV3Q8NET8 790 aa16.73■□□□□ 0.27
HDDC3-201ENST00000330334 SPATA4Q8NEY3 305 aa16.73■□□□□ 0.27
HDDC3-201ENST00000330334 M1APQ8TC57 530 aa16.73■□□□□ 0.27
HDDC3-201ENST00000330334 TBC1D20Q96BZ9 403 aa16.73■□□□□ 0.27
HDDC3-201ENST00000330334 MOCOSQ96EN8 888 aa16.73■□□□□ 0.27
HDDC3-201ENST00000330334 C5orf34Q96MH7 638 aa16.73■□□□□ 0.27
HDDC3-201ENST00000330334 AIF1LQ9BQI0 150 aa16.73■□□□□ 0.27
HDDC3-201ENST00000330334 LANCL2Q9NS86 450 aa16.73■□□□□ 0.27
HDDC3-201ENST00000330334 PLA2G3Q9NZ20 509 aa16.73■□□□□ 0.27
HDDC3-201ENST00000330334 SLC22A14Q9Y267 594 aa16.73■□□□□ 0.27
HDDC3-201ENST00000330334 DYRK1BQ9Y463 629 aa16.73■□□□□ 0.27
HDDC3-201ENST00000330334 CDK2AP1O14519 115 aa16.72■□□□□ 0.27
HDDC3-201ENST00000330334 WISP3O95389 354 aaPredicted RBP16.72■□□□□ 0.27
HDDC3-201ENST00000330334 WDPCPO95876 746 aa16.72■□□□□ 0.27
HDDC3-201ENST00000330334 RNF224P0DH78 156 aa16.72■□□□□ 0.27
HDDC3-201ENST00000330334 SAT1P21673 171 aa16.72■□□□□ 0.27
HDDC3-201ENST00000330334 REEP5Q00765 189 aa16.72■□□□□ 0.27
HDDC3-201ENST00000330334 NSDHLQ15738 373 aa16.72■□□□□ 0.27
HDDC3-201ENST00000330334 C4orf17Q53FE4 359 aa16.72■□□□□ 0.27
HDDC3-201ENST00000330334 CDKL4Q5MAI5 379 aa16.72■□□□□ 0.27
HDDC3-201ENST00000330334 MFSD4BQ5TF39 518 aa16.72■□□□□ 0.27
HDDC3-201ENST00000330334 LANCL3Q6ZV70 420 aa16.72■□□□□ 0.27
HDDC3-201ENST00000330334 CEP97Q8IW35 865 aa16.72■□□□□ 0.27
HDDC3-201ENST00000330334 SHISA5Q8N114 240 aa16.72■□□□□ 0.27
HDDC3-201ENST00000330334 ANKRD49Q8WVL7 239 aa16.72■□□□□ 0.27
HDDC3-201ENST00000330334 CDKL2Q92772 493 aa16.72■□□□□ 0.27
HDDC3-201ENST00000330334 SEC16BQ96JE7 1060 aa16.72■□□□□ 0.27
HDDC3-201ENST00000330334 PHACTR1Q9C0D0 580 aa16.72■□□□□ 0.27
HDDC3-201ENST00000330334 SLC6A16Q9GZN6 736 aa16.72■□□□□ 0.27
HDDC3-201ENST00000330334 DERL2Q9GZP9 239 aa16.72■□□□□ 0.27
HDDC3-201ENST00000330334 GPAMQ9HCL2 828 aa16.72■□□□□ 0.27
HDDC3-201ENST00000330334 MMP25Q9NPA2 562 aa16.72■□□□□ 0.27
HDDC3-201ENST00000330334 OLAHQ9NV23 265 aa16.72■□□□□ 0.27
HDDC3-201ENST00000330334 CTNNAL1Q9UBT7 734 aa16.72■□□□□ 0.27
HDDC3-201ENST00000330334 NOTCH2Q04721 2471 aa16.71■□□□□ 0.27
HDDC3-201ENST00000330334 OR5H15A6NDH6 313 aa16.71■□□□□ 0.27
HDDC3-201ENST00000330334 SEC24DO94855 1032 aaPredicted RBP16.71■□□□□ 0.27
HDDC3-201ENST00000330334 FHP07954 510 aa16.71■□□□□ 0.27
HDDC3-201ENST00000330334 SERPINA6P08185 405 aa16.71■□□□□ 0.27
HDDC3-201ENST00000330334 GSTA2P09210 222 aa16.71■□□□□ 0.27
HDDC3-201ENST00000330334 SMIM10L1P0DMW3 83 aa16.71■□□□□ 0.27
HDDC3-201ENST00000330334 JAK1P23458 1154 aa16.71■□□□□ 0.27
HDDC3-201ENST00000330334 ABRAXAS2Q15018 415 aa16.71■□□□□ 0.27
HDDC3-201ENST00000330334 BTBD16Q32M84 506 aa16.71■□□□□ 0.27
HDDC3-201ENST00000330334 DEFB134Q4QY38 66 aa16.71■□□□□ 0.27
HDDC3-201ENST00000330334 ANKRD53Q8N9V6 530 aa16.71■□□□□ 0.27
HDDC3-201ENST00000330334 DNAJB8Q8NHS0 232 aa16.71■□□□□ 0.27
HDDC3-201ENST00000330334 UTP15Q8TED0 518 aaKnown RBP16.71■□□□□ 0.27
HDDC3-201ENST00000330334 RHBDF1Q96CC6 855 aa16.71■□□□□ 0.27
HDDC3-201ENST00000330334 TSPAN17Q96FV3 270 aa16.71■□□□□ 0.27
HDDC3-201ENST00000330334 PEX11GQ96HA9 241 aa16.71■□□□□ 0.27
HDDC3-201ENST00000330334 SMIM10Q96HG1 83 aa16.71■□□□□ 0.27
HDDC3-201ENST00000330334 ZNF354BQ96LW1 612 aa16.71■□□□□ 0.27
HDDC3-201ENST00000330334 TSNARE1Q96NA8 513 aa16.71■□□□□ 0.27
HDDC3-201ENST00000330334 CPNE1Q99829 537 aa16.71■□□□□ 0.27
HDDC3-201ENST00000330334 CAPS2Q9BXY5 557 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms