RNA–Protein interactions for RNA: ENST00000590792.1

CCDC58P3-201, Transcript of coiled-coil domain containing 58 pseudogene 3, humanhuman

BASIC

Gene CCDC58P3, Length 430 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58P3-201ENST00000590792 TMEM154Q6P9G4 183 aa4.36□□□□□ -1.71
CCDC58P3-201ENST00000590792 KDM7AQ6ZMT4 941 aa4.36□□□□□ -1.71
CCDC58P3-201ENST00000590792 MARK2Q7KZI7 788 aaKnown RBP4.36□□□□□ -1.71
CCDC58P3-201ENST00000590792 TRMT1LQ7Z2T5 733 aaKnown RBP4.36□□□□□ -1.71
CCDC58P3-201ENST00000590792 PM20D2Q8IYS1 436 aa4.36□□□□□ -1.71
CCDC58P3-201ENST00000590792 METTL27Q8N6F8 245 aaPredicted RBP4.36□□□□□ -1.71
CCDC58P3-201ENST00000590792 EMC1Q8N766 993 aa4.36□□□□□ -1.71
CCDC58P3-201ENST00000590792 TRIML1Q8N9V2 468 aa4.36□□□□□ -1.71
CCDC58P3-201ENST00000590792 CHDHQ8NE62 594 aaPredicted RBP4.36□□□□□ -1.71
CCDC58P3-201ENST00000590792 GMCL1P1Q8NEA9 526 aa4.36□□□□□ -1.71
CCDC58P3-201ENST00000590792 PPHLN1Q8NEY8 458 aaKnown RBP4.36□□□□□ -1.71
CCDC58P3-201ENST00000590792 CCDC26Q8TAB7 109 aa4.36□□□□□ -1.71
CCDC58P3-201ENST00000590792 C9orf43Q8TAL5 461 aaPredicted RBP4.36□□□□□ -1.71
CCDC58P3-201ENST00000590792 NDRG1Q92597 394 aaKnown RBP4.36□□□□□ -1.71
CCDC58P3-201ENST00000590792 PHF21AQ96BD5 680 aa4.36□□□□□ -1.71
CCDC58P3-201ENST00000590792 ARSGQ96EG1 525 aa4.36□□□□□ -1.71
CCDC58P3-201ENST00000590792 DYNLL2Q96FJ2 89 aa4.36□□□□□ -1.71
CCDC58P3-201ENST00000590792 IWS1Q96ST2 819 aa4.36□□□□□ -1.71
CCDC58P3-201ENST00000590792 P2RY13Q9BPV8 354 aa4.36□□□□□ -1.71
CCDC58P3-201ENST00000590792 ZHX3Q9H4I2 956 aa4.36□□□□□ -1.71
CCDC58P3-201ENST00000590792 MAGIXQ9H6Y5 334 aa4.36□□□□□ -1.71
CCDC58P3-201ENST00000590792 FKRPQ9H9S5 495 aa4.36□□□□□ -1.71
CCDC58P3-201ENST00000590792 SEPT11Q9NVA2 429 aaKnown RBP4.36□□□□□ -1.71
CCDC58P3-201ENST00000590792 TBC1D13Q9NVG8 400 aa4.36□□□□□ -1.71
CCDC58P3-201ENST00000590792 DNAJB4Q9UDY4 337 aa4.36□□□□□ -1.71
CCDC58P3-201ENST00000590792 ISY1Q9ULR0 285 aaKnown RBP4.36□□□□□ -1.71
CCDC58P3-201ENST00000590792 FRMD3A2A2Y4 597 aa4.35□□□□□ -1.71
CCDC58P3-201ENST00000590792 MYO1GB0I1T2 1018 aa4.35□□□□□ -1.71
CCDC58P3-201ENST00000590792 F5H0A9 414 aaPredicted RBP4.35□□□□□ -1.71
CCDC58P3-201ENST00000590792 CCER2I3L3R5 266 aa4.35□□□□□ -1.71
CCDC58P3-201ENST00000590792 ZNF197O14709 1029 aa4.35□□□□□ -1.71
CCDC58P3-201ENST00000590792 SCAMP1O15126 338 aa4.35□□□□□ -1.71
CCDC58P3-201ENST00000590792 KRT86O43790 486 aa4.35□□□□□ -1.71
CCDC58P3-201ENST00000590792 DAB1O75553 588 aa4.35□□□□□ -1.71
CCDC58P3-201ENST00000590792 SP1P08047 785 aa4.35□□□□□ -1.71
CCDC58P3-201ENST00000590792 TMEM11P17152 192 aa4.35□□□□□ -1.71
CCDC58P3-201ENST00000590792 NR2F2P24468 414 aa4.35□□□□□ -1.71
CCDC58P3-201ENST00000590792 ACADLP28330 430 aa4.35□□□□□ -1.71
CCDC58P3-201ENST00000590792 RBMS1P29558 406 aaKnown RBP4.35□□□□□ -1.71
CCDC58P3-201ENST00000590792 MSH2P43246 934 aa4.35□□□□□ -1.71
CCDC58P3-201ENST00000590792 CAMPP49913 170 aa4.35□□□□□ -1.71
CCDC58P3-201ENST00000590792 KRT81Q14533 505 aa4.35□□□□□ -1.71
CCDC58P3-201ENST00000590792 PCGF3Q3KNV8 242 aa4.35□□□□□ -1.71
CCDC58P3-201ENST00000590792 ITPRIPL2Q3MIP1 535 aa4.35□□□□□ -1.71
CCDC58P3-201ENST00000590792 MARCH8Q5T0T0 291 aa4.35□□□□□ -1.71
CCDC58P3-201ENST00000590792 JADE1Q6IE81 842 aa4.35□□□□□ -1.71
CCDC58P3-201ENST00000590792 SARM1Q6SZW1 724 aa4.35□□□□□ -1.71
CCDC58P3-201ENST00000590792 CFAP77Q6ZQR2 320 aa4.35□□□□□ -1.71
CCDC58P3-201ENST00000590792 C1orf122Q6ZSJ8 110 aa4.35□□□□□ -1.71
CCDC58P3-201ENST00000590792 Q71RC1 249 aaPredicted RBP4.35□□□□□ -1.71
CCDC58P3-201ENST00000590792 Q75L30 129 aa4.35□□□□□ -1.71
CCDC58P3-201ENST00000590792 TSPAN33Q86UF1 283 aa4.35□□□□□ -1.71
CCDC58P3-201ENST00000590792 NME8Q8N427 588 aa4.35□□□□□ -1.71
CCDC58P3-201ENST00000590792 DEFB119Q8N690 84 aa4.35□□□□□ -1.71
CCDC58P3-201ENST00000590792 GSDMBQ8TAX9 411 aa4.35□□□□□ -1.71
CCDC58P3-201ENST00000590792 EXOC4Q96A65 974 aa4.35□□□□□ -1.71
CCDC58P3-201ENST00000590792 SKA1Q96BD8 255 aa4.35□□□□□ -1.71
CCDC58P3-201ENST00000590792 OXNAD1Q96HP4 312 aaPredicted RBP4.35□□□□□ -1.71
CCDC58P3-201ENST00000590792 NCAPGQ9BPX3 1015 aa4.35□□□□□ -1.71
CCDC58P3-201ENST00000590792 ZNF71Q9NQZ8 489 aaPredicted RBP4.35□□□□□ -1.71
CCDC58P3-201ENST00000590792 EIF2B3Q9NR50 452 aaKnown RBP4.35□□□□□ -1.71
CCDC58P3-201ENST00000590792 LYVE1Q9Y5Y7 322 aa4.35□□□□□ -1.71
CCDC58P3-201ENST00000590792 SESN1Q9Y6P5 492 aa4.35□□□□□ -1.71
CCDC58P3-201ENST00000590792 NFASCO94856 1347 aa4.35□□□□□ -1.71
CCDC58P3-201ENST00000590792 MYH4Q9Y623 1939 aa4.34□□□□□ -1.71
CCDC58P3-201ENST00000590792 KMT2CQ8NEZ4 4911 aaKnown RBP4.34□□□□□ -1.71
CCDC58P3-201ENST00000590792 CTAGE9A4FU28 777 aa4.34□□□□□ -1.71
CCDC58P3-201ENST00000590792 SMAD9O15198 467 aaKnown RBP4.34□□□□□ -1.71
CCDC58P3-201ENST00000590792 HS6ST1O60243 411 aa4.34□□□□□ -1.71
CCDC58P3-201ENST00000590792 SHOX2O60902 331 aaPredicted RBP4.34□□□□□ -1.71
CCDC58P3-201ENST00000590792 OR2C1O95371 312 aa4.34□□□□□ -1.71
CCDC58P3-201ENST00000590792 HIST1H2ABP04908 130 aa4.34□□□□□ -1.71
CCDC58P3-201ENST00000590792 SRPRAP08240 638 aaKnown RBP4.34□□□□□ -1.71
CCDC58P3-201ENST00000590792 CTAGE8P0CG41 777 aa4.34□□□□□ -1.71
CCDC58P3-201ENST00000590792 GABRB1P18505 474 aa4.34□□□□□ -1.71
CCDC58P3-201ENST00000590792 HIST1H2ADP20671 130 aa4.34□□□□□ -1.71
CCDC58P3-201ENST00000590792 HRH2P25021 359 aa4.34□□□□□ -1.71
CCDC58P3-201ENST00000590792 ITGA3P26006 1051 aa4.34□□□□□ -1.71
CCDC58P3-201ENST00000590792 AHRP35869 848 aa4.34□□□□□ -1.71
CCDC58P3-201ENST00000590792 LEPRP48357 1165 aaKnown RBP4.34□□□□□ -1.71
CCDC58P3-201ENST00000590792 GPR143P51810 404 aa4.34□□□□□ -1.71
CCDC58P3-201ENST00000590792 TERF1P54274 439 aa4.34□□□□□ -1.71
CCDC58P3-201ENST00000590792 CDH8P55286 799 aa4.34□□□□□ -1.71
CCDC58P3-201ENST00000590792 LINC01547P58512 204 aaPredicted RBP4.34□□□□□ -1.71
CCDC58P3-201ENST00000590792 CD81P60033 236 aa4.34□□□□□ -1.71
CCDC58P3-201ENST00000590792 KRTAP10-7P60409 375 aaPredicted RBP4.34□□□□□ -1.71
CCDC58P3-201ENST00000590792 SNAP25P60880 206 aa4.34□□□□□ -1.71
CCDC58P3-201ENST00000590792 PRAMEP78395 509 aa4.34□□□□□ -1.71
CCDC58P3-201ENST00000590792 RPL24P83731 157 aaKnown RBP4.34□□□□□ -1.71
CCDC58P3-201ENST00000590792 DNAJC3Q13217 504 aa4.34□□□□□ -1.71
CCDC58P3-201ENST00000590792 C14orf28Q4W4Y0 310 aa4.34□□□□□ -1.71
CCDC58P3-201ENST00000590792 CHST9Q7L1S5 443 aa4.34□□□□□ -1.71
CCDC58P3-201ENST00000590792 HIST3H2AQ7L7L0 130 aa4.34□□□□□ -1.71
CCDC58P3-201ENST00000590792 FAM228AQ86W67 206 aa4.34□□□□□ -1.71
CCDC58P3-201ENST00000590792 CTAGE4Q8IX94 777 aa4.34□□□□□ -1.71
CCDC58P3-201ENST00000590792 SLC5A8Q8N695 610 aa4.34□□□□□ -1.71
CCDC58P3-201ENST00000590792 RBM15BQ8NDT2 890 aaKnown RBP4.34□□□□□ -1.71
CCDC58P3-201ENST00000590792 TRPC4APQ8TEL6 797 aa4.34□□□□□ -1.71
CCDC58P3-201ENST00000590792 PPP4R1Q8TF05 950 aa4.34□□□□□ -1.71
CCDC58P3-201ENST00000590792 NR4A3Q92570 626 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms