RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 IST1P53990 364 aa16.34■□□□□ 0.21
RETREG3-210ENST00000590541 EIF3BP55884 814 aaKnown RBP16.34■□□□□ 0.21
RETREG3-210ENST00000590541 NAA25Q14CX7 972 aa16.34■□□□□ 0.21
RETREG3-210ENST00000590541 MEP1AQ16819 746 aa16.34■□□□□ 0.21
RETREG3-210ENST00000590541 RNFT1Q5M7Z0 435 aa16.34■□□□□ 0.21
RETREG3-210ENST00000590541 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.34■□□□□ 0.21
RETREG3-210ENST00000590541 CAND1Q86VP6 1230 aaKnown RBP16.34■□□□□ 0.21
RETREG3-210ENST00000590541 PAQR7Q86WK9 346 aa16.34■□□□□ 0.21
RETREG3-210ENST00000590541 LMNTD2Q8IXW0 634 aa16.34■□□□□ 0.21
RETREG3-210ENST00000590541 TMEM178AQ8NBL3 297 aa16.34■□□□□ 0.21
RETREG3-210ENST00000590541 METTL21AQ8WXB1 218 aa16.34■□□□□ 0.21
RETREG3-210ENST00000590541 NRGNQ92686 78 aa16.34■□□□□ 0.21
RETREG3-210ENST00000590541 OR2A5Q96R48 311 aa16.34■□□□□ 0.21
RETREG3-210ENST00000590541 CYTH2Q99418 400 aa16.34■□□□□ 0.21
RETREG3-210ENST00000590541 DRC3Q9H069 523 aa16.34■□□□□ 0.21
RETREG3-210ENST00000590541 CXXC4Q9H2H0 198 aa16.34■□□□□ 0.21
RETREG3-210ENST00000590541 KCNK13Q9HB14 408 aa16.34■□□□□ 0.21
RETREG3-210ENST00000590541 INTS10Q9NVR2 710 aaKnown RBP16.34■□□□□ 0.21
RETREG3-210ENST00000590541 SNX12Q9UMY4 172 aa16.34■□□□□ 0.21
RETREG3-210ENST00000590541 SCN2AQ99250 2005 aa16.34■□□□□ 0.21
RETREG3-210ENST00000590541 ABCA2Q9BZC7 2435 aa16.34■□□□□ 0.21
RETREG3-210ENST00000590541 A0A1B0GTL3 188 aa16.33■□□□□ 0.2
RETREG3-210ENST00000590541 PRRG2O14669 202 aa16.33■□□□□ 0.2
RETREG3-210ENST00000590541 NEURL1O76050 574 aa16.33■□□□□ 0.2
RETREG3-210ENST00000590541 TFF3Q07654 80 aa16.33■□□□□ 0.2
RETREG3-210ENST00000590541 DHX34Q14147 1143 aaKnown RBP16.33■□□□□ 0.2
RETREG3-210ENST00000590541 NEPROQ6NW34 567 aa16.33■□□□□ 0.2
RETREG3-210ENST00000590541 TGIF2LYQ8IUE0 185 aa16.33■□□□□ 0.2
RETREG3-210ENST00000590541 CILP2Q8IUL8 1156 aa16.33■□□□□ 0.2
RETREG3-210ENST00000590541 SLC35F6Q8N357 371 aa16.33■□□□□ 0.2
RETREG3-210ENST00000590541 MARVELD2Q8N4S9 558 aa16.33■□□□□ 0.2
RETREG3-210ENST00000590541 CALML6Q8TD86 181 aa16.33■□□□□ 0.2
RETREG3-210ENST00000590541 LPGAT1Q92604 370 aa16.33■□□□□ 0.2
RETREG3-210ENST00000590541 BIRC8Q96P09 236 aa16.33■□□□□ 0.2
RETREG3-210ENST00000590541 SPATA7Q9P0W8 599 aa16.33■□□□□ 0.2
RETREG3-210ENST00000590541 ANKHD1Q8IWZ3 2542 aaKnown RBP16.33■□□□□ 0.2
RETREG3-210ENST00000590541 P2RX6O15547 441 aa16.32■□□□□ 0.2
RETREG3-210ENST00000590541 AVILO75366 819 aa16.32■□□□□ 0.2
RETREG3-210ENST00000590541 SP1P08047 785 aa16.32■□□□□ 0.2
RETREG3-210ENST00000590541 TCP1P17987 556 aaKnown RBP16.32■□□□□ 0.2
RETREG3-210ENST00000590541 HCFC1P51610 2035 aa16.32■□□□□ 0.2
RETREG3-210ENST00000590541 FAM53BQ14153 422 aa16.32■□□□□ 0.2
RETREG3-210ENST00000590541 ANKRD20A4Q4UJ75 823 aa16.32■□□□□ 0.2
RETREG3-210ENST00000590541 ANKRD22Q5VYY1 191 aa16.32■□□□□ 0.2
RETREG3-210ENST00000590541 SLC25A25Q6KCM7 469 aa16.32■□□□□ 0.2
RETREG3-210ENST00000590541 SUSD1Q6UWL2 747 aa16.32■□□□□ 0.2
RETREG3-210ENST00000590541 CES3Q6UWW8 571 aa16.32■□□□□ 0.2
RETREG3-210ENST00000590541 DMRTC2Q8IXT2 367 aaPredicted RBP16.32■□□□□ 0.2
RETREG3-210ENST00000590541 PPIL6Q8IXY8 311 aa16.32■□□□□ 0.2
RETREG3-210ENST00000590541 EID3Q8N140 333 aa16.32■□□□□ 0.2
RETREG3-210ENST00000590541 GABPB2Q8TAK5 448 aaPredicted RBP16.32■□□□□ 0.2
RETREG3-210ENST00000590541 SKA2Q8WVK7 121 aaPredicted RBP16.32■□□□□ 0.2
RETREG3-210ENST00000590541 SERPINB12Q96P63 405 aa16.32■□□□□ 0.2
RETREG3-210ENST00000590541 MRPS30Q9NP92 439 aaKnown RBP16.32■□□□□ 0.2
RETREG3-210ENST00000590541 KLHL42Q9P2K6 505 aa16.32■□□□□ 0.2
RETREG3-210ENST00000590541 HRH3Q9Y5N1 445 aa16.32■□□□□ 0.2
RETREG3-210ENST00000590541 PRRC2AP48634 2157 aaKnown RBP16.31■□□□□ 0.2
RETREG3-210ENST00000590541 NKX2-6A6NCS4 301 aa16.31■□□□□ 0.2
RETREG3-210ENST00000590541 OR2W5A6NFC9 320 aa16.31■□□□□ 0.2
RETREG3-210ENST00000590541 GABRR3A8MPY1 467 aa16.31■□□□□ 0.2
RETREG3-210ENST00000590541 FOXO6A8MYZ6 492 aa16.31■□□□□ 0.2
RETREG3-210ENST00000590541 E5RI56 91 aa16.31■□□□□ 0.2
RETREG3-210ENST00000590541 CYC1P08574 325 aa16.31■□□□□ 0.2
RETREG3-210ENST00000590541 ERGP11308 486 aa16.31■□□□□ 0.2
RETREG3-210ENST00000590541 ZNF24P17028 368 aa16.31■□□□□ 0.2
RETREG3-210ENST00000590541 FMO4P31512 558 aa16.31■□□□□ 0.2
RETREG3-210ENST00000590541 MAGEA3P43357 314 aa16.31■□□□□ 0.2
RETREG3-210ENST00000590541 THOC5Q13769 683 aaKnown RBP16.31■□□□□ 0.2
RETREG3-210ENST00000590541 GBX1Q14549 363 aa16.31■□□□□ 0.2
RETREG3-210ENST00000590541 CTSL3PQ5NE16 218 aa16.31■□□□□ 0.2
RETREG3-210ENST00000590541 ZNF425Q6IV72 752 aa16.31■□□□□ 0.2
RETREG3-210ENST00000590541 CEP128Q6ZU80 1094 aa16.31■□□□□ 0.2
RETREG3-210ENST00000590541 ANKRD37Q7Z713 158 aa16.31■□□□□ 0.2
RETREG3-210ENST00000590541 PCGF5Q86SE9 256 aa16.31■□□□□ 0.2
RETREG3-210ENST00000590541 TMEM200AQ86VY9 491 aa16.31■□□□□ 0.2
RETREG3-210ENST00000590541 FAM98AQ8NCA5 519 aaKnown RBP16.31■□□□□ 0.2
RETREG3-210ENST00000590541 M1APQ8TC57 530 aa16.31■□□□□ 0.2
RETREG3-210ENST00000590541 FOXC2Q99958 501 aa16.31■□□□□ 0.2
RETREG3-210ENST00000590541 UCK2Q9BZX2 261 aa16.31■□□□□ 0.2
RETREG3-210ENST00000590541 MMP25Q9NPA2 562 aa16.31■□□□□ 0.2
RETREG3-210ENST00000590541 C19orf25Q9UFG5 118 aaPredicted RBP16.31■□□□□ 0.2
RETREG3-210ENST00000590541 COMMD10Q9Y6G5 202 aa16.31■□□□□ 0.2
RETREG3-210ENST00000590541 FAM155BO75949 473 aa16.3■□□□□ 0.2
RETREG3-210ENST00000590541 TOXO94900 526 aa16.3■□□□□ 0.2
RETREG3-210ENST00000590541 MATN4O95460 622 aa16.3■□□□□ 0.2
RETREG3-210ENST00000590541 PKMP14618 531 aaKnown RBP16.3■□□□□ 0.2
RETREG3-210ENST00000590541 KLK2P20151 261 aa16.3■□□□□ 0.2
RETREG3-210ENST00000590541 CHRM3P20309 590 aa16.3■□□□□ 0.2
RETREG3-210ENST00000590541 MSX1P28360 303 aa16.3■□□□□ 0.2
RETREG3-210ENST00000590541 PTGER1P34995 402 aa16.3■□□□□ 0.2
RETREG3-210ENST00000590541 OC90Q02509 493 aaPredicted RBP16.3■□□□□ 0.2
RETREG3-210ENST00000590541 PPP1R7Q15435 360 aa16.3■□□□□ 0.2
RETREG3-210ENST00000590541 EXT1Q16394 746 aa16.3■□□□□ 0.2
RETREG3-210ENST00000590541 TTLL9Q3SXZ7 439 aa16.3■□□□□ 0.2
RETREG3-210ENST00000590541 MINDY4Q4G0A6 757 aa16.3■□□□□ 0.2
RETREG3-210ENST00000590541 MFSD4BQ5TF39 518 aa16.3■□□□□ 0.2
RETREG3-210ENST00000590541 ZNF468Q5VIY5 522 aaPredicted RBP16.3■□□□□ 0.2
RETREG3-210ENST00000590541 CENPUQ71F23 418 aa16.3■□□□□ 0.2
RETREG3-210ENST00000590541 CPSF7Q8N684 471 aaKnown RBP16.3■□□□□ 0.2
RETREG3-210ENST00000590541 NAT8LQ8N9F0 302 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms