RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 FBXL8Q96CD0 374 aa8.4□□□□□ -1.06
CHD4-204ENST00000535810 PDLIM5Q96HC4 596 aaKnown RBP8.4□□□□□ -1.06
CHD4-204ENST00000535810 VPS39Q96JC1 886 aa8.4□□□□□ -1.06
CHD4-204ENST00000535810 OR4K3Q96R72 315 aa8.4□□□□□ -1.06
CHD4-204ENST00000535810 CRB3Q9BUF7 120 aa8.4□□□□□ -1.06
CHD4-204ENST00000535810 ATP13A2Q9NQ11 1180 aa8.4□□□□□ -1.06
CHD4-204ENST00000535810 NSMCE4AQ9NXX6 385 aa8.4□□□□□ -1.06
CHD4-204ENST00000535810 TRPC4Q9UBN4 977 aa8.4□□□□□ -1.06
CHD4-204ENST00000535810 C3orf18Q9UK00 162 aa8.4□□□□□ -1.06
CHD4-204ENST00000535810 UTP11Q9Y3A2 253 aaKnown RBP8.4□□□□□ -1.06
CHD4-204ENST00000535810 NUP210LQ5VU65 1888 aa8.4□□□□□ -1.07
CHD4-204ENST00000535810 A0A0A6YYC8 382 aaPredicted RBP8.39□□□□□ -1.07
CHD4-204ENST00000535810 FEZF1A0PJY2 475 aa8.39□□□□□ -1.07
CHD4-204ENST00000535810 PABPN1LA6NDY0 278 aaKnown RBP8.39□□□□□ -1.07
CHD4-204ENST00000535810 TTLL8A6PVC2 850 aa8.39□□□□□ -1.07
CHD4-204ENST00000535810 CXorf49A8MYA2 514 aaPredicted RBP8.39□□□□□ -1.07
CHD4-204ENST00000535810 I3L1I5 382 aaPredicted RBP8.39□□□□□ -1.07
CHD4-204ENST00000535810 CDC7O00311 574 aa8.39□□□□□ -1.07
CHD4-204ENST00000535810 PRPF4O43172 522 aaKnown RBP eCLIP8.39□□□□□ -1.073e-6■□□□□ 8.8
CHD4-204ENST00000535810 WISP3O95389 354 aaPredicted RBP8.39□□□□□ -1.07
CHD4-204ENST00000535810 GUCA1CO95843 209 aa8.39□□□□□ -1.07
CHD4-204ENST00000535810 C1QAP02745 245 aa8.39□□□□□ -1.07
CHD4-204ENST00000535810 ACPPP15309 386 aa8.39□□□□□ -1.07
CHD4-204ENST00000535810 NPPBP16860 134 aa8.39□□□□□ -1.07
CHD4-204ENST00000535810 ITGA3P26006 1051 aa8.39□□□□□ -1.07
CHD4-204ENST00000535810 CD97P48960 835 aa8.39□□□□□ -1.07
CHD4-204ENST00000535810 CCR8P51685 355 aa8.39□□□□□ -1.07
CHD4-204ENST00000535810 PLTPP55058 493 aa8.39□□□□□ -1.07
CHD4-204ENST00000535810 MAT1AQ00266 395 aaKnown RBP8.39□□□□□ -1.07
CHD4-204ENST00000535810 TRADDQ15628 312 aa8.39□□□□□ -1.07
CHD4-204ENST00000535810 SYT16Q17RD7 645 aa8.39□□□□□ -1.07
CHD4-204ENST00000535810 TUBB8Q3ZCM7 444 aa8.39□□□□□ -1.07
CHD4-204ENST00000535810 TEX35Q5T0J7 233 aa8.39□□□□□ -1.07
CHD4-204ENST00000535810 SLC6A19Q695T7 634 aa8.39□□□□□ -1.07
CHD4-204ENST00000535810 TMEM214Q6NUQ4 689 aaKnown RBP8.39□□□□□ -1.07
CHD4-204ENST00000535810 JMJD6Q6NYC1 403 aaPredicted RBP8.39□□□□□ -1.07
CHD4-204ENST00000535810 ZDHHC24Q6UX98 284 aa8.39□□□□□ -1.07
CHD4-204ENST00000535810 IGFL3Q6UXB1 125 aa8.39□□□□□ -1.07
CHD4-204ENST00000535810 PRSS41Q7RTY9 318 aa8.39□□□□□ -1.07
CHD4-204ENST00000535810 MTERF4Q7Z6M4 381 aaKnown RBP8.39□□□□□ -1.07
CHD4-204ENST00000535810 ASPGQ86U10 573 aa8.39□□□□□ -1.07
CHD4-204ENST00000535810 CEP97Q8IW35 865 aa8.39□□□□□ -1.07
CHD4-204ENST00000535810 ZC3H7AQ8IWR0 971 aaKnown RBP8.39□□□□□ -1.07
CHD4-204ENST00000535810 NKAPQ8N5F7 415 aaKnown RBP8.39□□□□□ -1.07
CHD4-204ENST00000535810 Q8NA96 180 aa8.39□□□□□ -1.07
CHD4-204ENST00000535810 ABHD11Q8NFV4 315 aa8.39□□□□□ -1.07
CHD4-204ENST00000535810 OR9A4Q8NGU2 314 aa8.39□□□□□ -1.07
CHD4-204ENST00000535810 FBXO25Q8TCJ0 367 aa8.39□□□□□ -1.07
CHD4-204ENST00000535810 ANKRD49Q8WVL7 239 aa8.39□□□□□ -1.07
CHD4-204ENST00000535810 ATL1Q8WXF7 558 aa8.39□□□□□ -1.07
CHD4-204ENST00000535810 ANKRD7Q92527 254 aa8.39□□□□□ -1.07
CHD4-204ENST00000535810 PNPLA2Q96AD5 504 aa8.39□□□□□ -1.07
CHD4-204ENST00000535810 MMABQ96EY8 250 aaPredicted RBP8.39□□□□□ -1.07
CHD4-204ENST00000535810 MACROD1Q9BQ69 325 aa8.39□□□□□ -1.07
CHD4-204ENST00000535810 HAUS8Q9BT25 410 aa8.39□□□□□ -1.07
CHD4-204ENST00000535810 TRIM54Q9BYV2 358 aa8.39□□□□□ -1.07
CHD4-204ENST00000535810 PHACTR1Q9C0D0 580 aa8.39□□□□□ -1.07
CHD4-204ENST00000535810 TGIF2Q9GZN2 237 aa8.39□□□□□ -1.07
CHD4-204ENST00000535810 RAB17Q9H0T7 212 aa8.39□□□□□ -1.07
CHD4-204ENST00000535810 ZNF552Q9H707 407 aaPredicted RBP8.39□□□□□ -1.07
CHD4-204ENST00000535810 POPDC3Q9HBV1 291 aa8.39□□□□□ -1.07
CHD4-204ENST00000535810 MKKSQ9NPJ1 570 aaPredicted RBP8.39□□□□□ -1.07
CHD4-204ENST00000535810 C14orf105Q9NVL8 296 aa8.39□□□□□ -1.07
CHD4-204ENST00000535810 LUZP4Q9P127 313 aa8.39□□□□□ -1.07
CHD4-204ENST00000535810 C5AR2Q9P296 337 aa8.39□□□□□ -1.07
CHD4-204ENST00000535810 NOVA2Q9UNW9 492 aaKnown RBP8.39□□□□□ -1.07
CHD4-204ENST00000535810 ITPR2Q14571 2701 aa8.39□□□□□ -1.07
CHD4-204ENST00000535810 DOCK10Q96BY6 2186 aa8.39□□□□□ -1.07
CHD4-204ENST00000535810 FBN2P35556 2912 aa8.39□□□□□ -1.07
CHD4-204ENST00000535810 SPTBN1Q01082 2364 aaKnown RBP8.39□□□□□ -1.07
CHD4-204ENST00000535810 UTP20O75691 2785 aaKnown RBP8.38□□□□□ -1.07
CHD4-204ENST00000535810 A0A1W2PQ72 361 aa8.38□□□□□ -1.07
CHD4-204ENST00000535810 ESYT3A0FGR9 886 aa8.38□□□□□ -1.07
CHD4-204ENST00000535810 FAM159BA6NKW6 160 aa8.38□□□□□ -1.07
CHD4-204ENST00000535810 IDSB3KWA1 339 aa8.38□□□□□ -1.07
CHD4-204ENST00000535810 H0YIG0 161 aa8.38□□□□□ -1.07
CHD4-204ENST00000535810 MAP2K7O14733 419 aa8.38□□□□□ -1.07
CHD4-204ENST00000535810 LCMT2O60294 686 aaKnown RBP8.38□□□□□ -1.07
CHD4-204ENST00000535810 IPO13O94829 963 aaKnown RBP8.38□□□□□ -1.07
CHD4-204ENST00000535810 NSA2O95478 260 aaKnown RBP8.38□□□□□ -1.07
CHD4-204ENST00000535810 TUBBP07437 444 aa8.38□□□□□ -1.07
CHD4-204ENST00000535810 ANXA5P08758 320 aa8.38□□□□□ -1.07
CHD4-204ENST00000535810 COX6A1P12074 109 aa8.38□□□□□ -1.07
CHD4-204ENST00000535810 IL1RNP18510 177 aa8.38□□□□□ -1.07
CHD4-204ENST00000535810 GRK3P35626 688 aa8.38□□□□□ -1.07
CHD4-204ENST00000535810 EFNA3P52797 238 aa8.38□□□□□ -1.07
CHD4-204ENST00000535810 GPX6P59796 221 aa8.38□□□□□ -1.07
CHD4-204ENST00000535810 POU4F1Q01851 419 aa8.38□□□□□ -1.07
CHD4-204ENST00000535810 MEF2AQ02078 507 aaPredicted RBP8.38□□□□□ -1.07
CHD4-204ENST00000535810 CAV1Q03135 178 aa8.38□□□□□ -1.07
CHD4-204ENST00000535810 Q0VFX4 171 aa8.38□□□□□ -1.07
CHD4-204ENST00000535810 ILF2Q12905 390 aaKnown RBP8.38□□□□□ -1.07
CHD4-204ENST00000535810 TSNQ15631 228 aaKnown RBP8.38□□□□□ -1.07
CHD4-204ENST00000535810 NDUFA9Q16795 377 aa8.38□□□□□ -1.07
CHD4-204ENST00000535810 PRR30Q53SZ7 412 aaPredicted RBP8.38□□□□□ -1.07
CHD4-204ENST00000535810 ATG9BQ674R7 924 aa8.38□□□□□ -1.07
CHD4-204ENST00000535810 CYS1Q717R9 158 aa8.38□□□□□ -1.07
CHD4-204ENST00000535810 ADAMTSL2Q86TH1 951 aa8.38□□□□□ -1.07
CHD4-204ENST00000535810 SHISA5Q8N114 240 aa8.38□□□□□ -1.07
CHD4-204ENST00000535810 MFSD9Q8NBP5 474 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 397.9 ms