RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 PRAMEF17Q5VTA0 474 aa17.31■□□□□ 0.36
VEGFA-222ENST00000520948 PLD3Q8IV08 490 aa17.31■□□□□ 0.36
VEGFA-222ENST00000520948 SLC38A9Q8NBW4 561 aa17.31■□□□□ 0.36
VEGFA-222ENST00000520948 ZNF740Q8NDX6 193 aa17.31■□□□□ 0.36
VEGFA-222ENST00000520948 APOBEC4Q8WW27 367 aaKnown RBP17.31■□□□□ 0.36
VEGFA-222ENST00000520948 TM4SF19Q96DZ7 209 aa17.31■□□□□ 0.36
VEGFA-222ENST00000520948 THAP11Q96EK4 314 aa17.31■□□□□ 0.36
VEGFA-222ENST00000520948 ABHD17AQ96GS6 310 aa17.31■□□□□ 0.36
VEGFA-222ENST00000520948 EFHD1Q9BUP0 239 aa17.31■□□□□ 0.36
VEGFA-222ENST00000520948 EHD1Q9H4M9 534 aa17.31■□□□□ 0.36
VEGFA-222ENST00000520948 COPG2Q9UBF2 871 aa17.31■□□□□ 0.36
VEGFA-222ENST00000520948 ANAPC2Q9UJX6 822 aa17.31■□□□□ 0.36
VEGFA-222ENST00000520948 TRBC2A0A5B9 178 aa17.3■□□□□ 0.36
VEGFA-222ENST00000520948 FEZF1A0PJY2 475 aa17.3■□□□□ 0.36
VEGFA-222ENST00000520948 H0YGG7 62 aa17.3■□□□□ 0.36
VEGFA-222ENST00000520948 CLGNO14967 610 aa17.3■□□□□ 0.36
VEGFA-222ENST00000520948 OR2B3O76000 313 aa17.3■□□□□ 0.36
VEGFA-222ENST00000520948 EPB42P16452 691 aa17.3■□□□□ 0.36
VEGFA-222ENST00000520948 F8A1P23610 371 aa17.3■□□□□ 0.36
VEGFA-222ENST00000520948 VARSP26640 1264 aaKnown RBP17.3■□□□□ 0.36
VEGFA-222ENST00000520948 EEF1DP29692 281 aaKnown RBP17.3■□□□□ 0.36
VEGFA-222ENST00000520948 STAT5AP42229 794 aa17.3■□□□□ 0.36
VEGFA-222ENST00000520948 ARF3P61204 181 aaPredicted RBP17.3■□□□□ 0.36
VEGFA-222ENST00000520948 RPS15AP62244 130 aaKnown RBP17.3■□□□□ 0.36
VEGFA-222ENST00000520948 REEP5Q00765 189 aa17.3■□□□□ 0.36
VEGFA-222ENST00000520948 MEF2AQ02078 507 aaPredicted RBP17.3■□□□□ 0.36
VEGFA-222ENST00000520948 UBAP2LQ14157 1087 aaKnown RBP17.3■□□□□ 0.36
VEGFA-222ENST00000520948 TBCCQ15814 346 aa17.3■□□□□ 0.36
VEGFA-222ENST00000520948 PRTGQ2VWP7 1150 aa17.3■□□□□ 0.36
VEGFA-222ENST00000520948 WASHC2DQ5SRD0 308 aa17.3■□□□□ 0.36
VEGFA-222ENST00000520948 TLDC1Q6P9B6 456 aa17.3■□□□□ 0.36
VEGFA-222ENST00000520948 ZYG11AQ6WRX3 759 aa17.3■□□□□ 0.36
VEGFA-222ENST00000520948 VN1R4Q7Z5H5 301 aa17.3■□□□□ 0.36
VEGFA-222ENST00000520948 ADCK2Q7Z695 626 aa17.3■□□□□ 0.36
VEGFA-222ENST00000520948 TEX9Q8N6V9 391 aa17.3■□□□□ 0.36
VEGFA-222ENST00000520948 SNX31Q8N9S9 440 aa17.3■□□□□ 0.36
VEGFA-222ENST00000520948 N4BP2L2Q92802 583 aaPredicted RBP17.3■□□□□ 0.36
VEGFA-222ENST00000520948 ZBTB9Q96C00 473 aa17.3■□□□□ 0.36
VEGFA-222ENST00000520948 SMC6Q96SB8 1091 aa17.3■□□□□ 0.36
VEGFA-222ENST00000520948 SELENOSQ9BQE4 189 aa17.3■□□□□ 0.36
VEGFA-222ENST00000520948 ULBP3Q9BZM4 244 aa17.3■□□□□ 0.36
VEGFA-222ENST00000520948 NT5DC2Q9H857 520 aa17.3■□□□□ 0.36
VEGFA-222ENST00000520948 TMBIM4Q9HC24 238 aa17.3■□□□□ 0.36
VEGFA-222ENST00000520948 ZBTB26Q9HCK0 441 aa17.3■□□□□ 0.36
VEGFA-222ENST00000520948 SSU72Q9NP77 194 aaKnown RBP17.3■□□□□ 0.36
VEGFA-222ENST00000520948 PCTPQ9UKL6 214 aa17.3■□□□□ 0.36
VEGFA-222ENST00000520948 ACTL7BQ9Y614 415 aa17.3■□□□□ 0.36
VEGFA-222ENST00000520948 RELNP78509 3460 aa17.3■□□□□ 0.36
VEGFA-222ENST00000520948 SPTBP11277 2137 aa17.29■□□□□ 0.36
VEGFA-222ENST00000520948 ZNF749O43361 778 aa17.29■□□□□ 0.36
VEGFA-222ENST00000520948 SPAG7O75391 227 aa17.29■□□□□ 0.36
VEGFA-222ENST00000520948 SCRG1O75711 98 aa17.29■□□□□ 0.36
VEGFA-222ENST00000520948 KIAA0754O94854 1291 aa17.29■□□□□ 0.36
VEGFA-222ENST00000520948 RPS17P08708 135 aaKnown RBP17.29■□□□□ 0.36
VEGFA-222ENST00000520948 CD22P20273 847 aa17.29■□□□□ 0.36
VEGFA-222ENST00000520948 NR1D1P20393 614 aa17.29■□□□□ 0.36
VEGFA-222ENST00000520948 IMPDH1P20839 514 aa17.29■□□□□ 0.36
VEGFA-222ENST00000520948 DLSTP36957 453 aa17.29■□□□□ 0.36
VEGFA-222ENST00000520948 BCL6P41182 706 aa17.29■□□□□ 0.36
VEGFA-222ENST00000520948 SCTRP47872 440 aa17.29■□□□□ 0.36
VEGFA-222ENST00000520948 PRKAA2P54646 552 aa17.29■□□□□ 0.36
VEGFA-222ENST00000520948 VSX2P58304 361 aaPredicted RBP17.29■□□□□ 0.36
VEGFA-222ENST00000520948 MC1RQ01726 317 aa17.29■□□□□ 0.36
VEGFA-222ENST00000520948 GTF2H2Q13888 395 aa17.29■□□□□ 0.36
VEGFA-222ENST00000520948 DOC2AQ14183 400 aa17.29■□□□□ 0.36
VEGFA-222ENST00000520948 MAP7Q14244 749 aa17.29■□□□□ 0.36
VEGFA-222ENST00000520948 LACTB2Q53H82 288 aaPredicted RBP17.29■□□□□ 0.36
VEGFA-222ENST00000520948 GTF2H2CQ6P1K8 395 aa17.29■□□□□ 0.36
VEGFA-222ENST00000520948 HDXQ7Z353 690 aa17.29■□□□□ 0.36
VEGFA-222ENST00000520948 GOLGA7Q7Z5G4 137 aa17.29■□□□□ 0.36
VEGFA-222ENST00000520948 TMPRSS11BQ86T26 416 aa17.29■□□□□ 0.36
VEGFA-222ENST00000520948 TMEM126BQ8IUX1 230 aa17.29■□□□□ 0.36
VEGFA-222ENST00000520948 SLC22A9Q8IVM8 553 aa17.29■□□□□ 0.36
VEGFA-222ENST00000520948 GPR135Q8IZ08 494 aa17.29■□□□□ 0.36
VEGFA-222ENST00000520948 ARHGEF39Q8N4T4 335 aa17.29■□□□□ 0.36
VEGFA-222ENST00000520948 ESX1Q8N693 406 aa17.29■□□□□ 0.36
VEGFA-222ENST00000520948 MFSD9Q8NBP5 474 aa17.29■□□□□ 0.36
VEGFA-222ENST00000520948 RDH11Q8TC12 318 aa17.29■□□□□ 0.36
VEGFA-222ENST00000520948 L3HYPDHQ96EM0 354 aa17.29■□□□□ 0.36
VEGFA-222ENST00000520948 PTCD3Q96EY7 689 aaKnown RBP17.29■□□□□ 0.36
VEGFA-222ENST00000520948 LRFN5Q96NI6 719 aa17.29■□□□□ 0.36
VEGFA-222ENST00000520948 AIF1LQ9BQI0 150 aa17.29■□□□□ 0.36
VEGFA-222ENST00000520948 PITHD1Q9GZP4 211 aaPredicted RBP17.29■□□□□ 0.36
VEGFA-222ENST00000520948 VIPAS39Q9H9C1 493 aa17.29■□□□□ 0.36
VEGFA-222ENST00000520948 ZNF490Q9ULM2 529 aaPredicted RBP17.29■□□□□ 0.36
VEGFA-222ENST00000520948 AP1M2Q9Y6Q5 423 aa17.29■□□□□ 0.36
VEGFA-222ENST00000520948 H2AFYO75367 372 aaKnown RBP17.28■□□□□ 0.36
VEGFA-222ENST00000520948 NTRK1P04629 796 aa17.28■□□□□ 0.36
VEGFA-222ENST00000520948 MYZAPP0CAP1 466 aa17.28■□□□□ 0.36
VEGFA-222ENST00000520948 CXCR2P25025 360 aa17.28■□□□□ 0.36
VEGFA-222ENST00000520948 GRK3P35626 688 aa17.28■□□□□ 0.36
VEGFA-222ENST00000520948 EMP3P54852 163 aa17.28■□□□□ 0.36
VEGFA-222ENST00000520948 HERVK_113P63132 956 aa17.28■□□□□ 0.36
VEGFA-222ENST00000520948 CHIT1Q13231 466 aa17.28■□□□□ 0.36
VEGFA-222ENST00000520948 UNC50Q53HI1 259 aa17.28■□□□□ 0.36
VEGFA-222ENST00000520948 ZNF678Q5SXM1 525 aa17.28■□□□□ 0.36
VEGFA-222ENST00000520948 ZNF385CQ66K41 422 aaPredicted RBP17.28■□□□□ 0.36
VEGFA-222ENST00000520948 RHBDD2Q6NTF9 364 aa17.28■□□□□ 0.36
VEGFA-222ENST00000520948 ZNF517Q6ZMY9 492 aaPredicted RBP17.28■□□□□ 0.36
VEGFA-222ENST00000520948 ANKRD53Q8N9V6 530 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms