RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 LEUTXA8MZ59 168 aa11.94□□□□□ -0.5
USP11-206ENST00000469080 KERAO60938 352 aa11.94□□□□□ -0.5
USP11-206ENST00000469080 UPK1BO75841 260 aa11.94□□□□□ -0.5
USP11-206ENST00000469080 SNAP29O95721 258 aa11.94□□□□□ -0.5
USP11-206ENST00000469080 ELFN1P0C7U0 828 aa11.94□□□□□ -0.5
USP11-206ENST00000469080 POU2F1P14859 743 aa11.94□□□□□ -0.5
USP11-206ENST00000469080 KELP23276 732 aa11.94□□□□□ -0.5
USP11-206ENST00000469080 HTR7P34969 479 aa11.94□□□□□ -0.5
USP11-206ENST00000469080 SPAM1P38567 509 aa11.94□□□□□ -0.5
USP11-206ENST00000469080 ZNF33AQ06730 810 aa11.94□□□□□ -0.5
USP11-206ENST00000469080 GALEQ14376 348 aa11.94□□□□□ -0.5
USP11-206ENST00000469080 KRT33BQ14525 404 aa11.94□□□□□ -0.5
USP11-206ENST00000469080 SETMARQ53H47 684 aaPredicted RBP11.94□□□□□ -0.5
USP11-206ENST00000469080 FAM109BQ6ICB4 259 aaPredicted RBP11.94□□□□□ -0.5
USP11-206ENST00000469080 NCEH1Q6PIU2 408 aa11.94□□□□□ -0.5
USP11-206ENST00000469080 GOLGA7Q7Z5G4 137 aa11.94□□□□□ -0.5
USP11-206ENST00000469080 SFTPA1Q8IWL2 248 aa11.94□□□□□ -0.5
USP11-206ENST00000469080 AADATQ8N5Z0 425 aa11.94□□□□□ -0.5
USP11-206ENST00000469080 ZBTB2Q8N680 514 aa11.94□□□□□ -0.5
USP11-206ENST00000469080 KIAA1191Q96A73 305 aa11.94□□□□□ -0.5
USP11-206ENST00000469080 PHF21AQ96BD5 680 aa11.94□□□□□ -0.5
USP11-206ENST00000469080 UBXN10Q96LJ8 280 aa11.94□□□□□ -0.5
USP11-206ENST00000469080 NRTNQ99748 197 aa11.94□□□□□ -0.5
USP11-206ENST00000469080 C6orf62Q9GZU0 229 aaPredicted RBP11.94□□□□□ -0.5
USP11-206ENST00000469080 C11orf49Q9H6J7 331 aa11.94□□□□□ -0.5
USP11-206ENST00000469080 LHX3Q9UBR4 397 aa11.94□□□□□ -0.5
USP11-206ENST00000469080 MAGED1Q9Y5V3 778 aaPredicted RBP11.94□□□□□ -0.5
USP11-206ENST00000469080 CTDSP2O14595 271 aa11.94□□□□□ -0.5
USP11-206ENST00000469080 SSX5O60225 188 aa11.94□□□□□ -0.5
USP11-206ENST00000469080 MYF6P23409 242 aa11.94□□□□□ -0.5
USP11-206ENST00000469080 DGKAP23743 735 aa11.94□□□□□ -0.5
USP11-206ENST00000469080 LIPEQ05469 1076 aa11.94□□□□□ -0.5
USP11-206ENST00000469080 TTLL9Q3SXZ7 439 aa11.94□□□□□ -0.5
USP11-206ENST00000469080 CYP27C1Q4G0S4 372 aa11.94□□□□□ -0.5
USP11-206ENST00000469080 LIX1Q8N485 282 aa11.94□□□□□ -0.5
USP11-206ENST00000469080 ITFG1Q8TB96 612 aa11.94□□□□□ -0.5
USP11-206ENST00000469080 RIT1Q92963 219 aa11.94□□□□□ -0.5
USP11-206ENST00000469080 TMEM159Q96B96 161 aa11.94□□□□□ -0.5
USP11-206ENST00000469080 SECISBP2Q96T21 854 aaKnown RBP11.94□□□□□ -0.5
USP11-206ENST00000469080 MYO16Q9Y6X6 1858 aa11.94□□□□□ -0.5
USP11-206ENST00000469080 CACNA1CQ13936 2221 aa11.94□□□□□ -0.5
USP11-206ENST00000469080 GRM6O15303 877 aa11.94□□□□□ -0.5
USP11-206ENST00000469080 F11P03951 625 aa11.94□□□□□ -0.5
USP11-206ENST00000469080 BDKRB1P46663 353 aa11.94□□□□□ -0.5
USP11-206ENST00000469080 ALDH9A1P49189 494 aa11.94□□□□□ -0.5
USP11-206ENST00000469080 POLR2JP52435 117 aaKnown RBP11.94□□□□□ -0.5
USP11-206ENST00000469080 C2orf27AQ580R0 203 aa11.94□□□□□ -0.5
USP11-206ENST00000469080 YIF1BQ5BJH7 314 aa11.94□□□□□ -0.5
USP11-206ENST00000469080 PIGGQ5H8A4 983 aa11.94□□□□□ -0.5
USP11-206ENST00000469080 CRTC1Q6UUV9 634 aa11.94□□□□□ -0.5
USP11-206ENST00000469080 NOXA1Q86UR1 476 aa11.94□□□□□ -0.5
USP11-206ENST00000469080 LSRQ86X29 649 aaPredicted RBP11.94□□□□□ -0.5
USP11-206ENST00000469080 NDNFQ8TB73 568 aa11.94□□□□□ -0.5
USP11-206ENST00000469080 FYTTD1Q96QD9 318 aaKnown RBP11.94□□□□□ -0.5
USP11-206ENST00000469080 ATOH8Q96SQ7 321 aa11.94□□□□□ -0.5
USP11-206ENST00000469080 ARNT2Q9HBZ2 717 aa11.94□□□□□ -0.5
USP11-206ENST00000469080 EVA1BQ9NVM1 165 aa11.94□□□□□ -0.5
USP11-206ENST00000469080 OR6C70A6NIJ9 312 aa11.93□□□□□ -0.5
USP11-206ENST00000469080 H3BNC9 293 aa11.93□□□□□ -0.5
USP11-206ENST00000469080 ATG13O75143 517 aa11.93□□□□□ -0.5
USP11-206ENST00000469080 CD9P21926 228 aa11.93□□□□□ -0.5
USP11-206ENST00000469080 PSMA4P25789 261 aaKnown RBP11.93□□□□□ -0.5
USP11-206ENST00000469080 PTGER1P34995 402 aa11.93□□□□□ -0.5
USP11-206ENST00000469080 TALDO1P37837 337 aa11.93□□□□□ -0.5
USP11-206ENST00000469080 PTGER3P43115 390 aa11.93□□□□□ -0.5
USP11-206ENST00000469080 DEFA1P59665 94 aa11.93□□□□□ -0.5
USP11-206ENST00000469080 DEFA3P59666 94 aa11.93□□□□□ -0.5
USP11-206ENST00000469080 VBP1P61758 197 aa11.93□□□□□ -0.5
USP11-206ENST00000469080 MESP2Q0VG99 397 aa11.93□□□□□ -0.5
USP11-206ENST00000469080 MAPKAPK3Q16644 382 aa11.93□□□□□ -0.5
USP11-206ENST00000469080 XKR6Q5GH73 641 aa11.93□□□□□ -0.5
USP11-206ENST00000469080 TPGS2Q68CL5 300 aa11.93□□□□□ -0.5
USP11-206ENST00000469080 C22orf39Q6P5X5 142 aa11.93□□□□□ -0.5
USP11-206ENST00000469080 TMEM150AQ86TG1 271 aa11.93□□□□□ -0.5
USP11-206ENST00000469080 VRK3Q8IV63 474 aa11.93□□□□□ -0.5
USP11-206ENST00000469080 AP2M1Q96CW1 435 aa11.93□□□□□ -0.5
USP11-206ENST00000469080 TUBA1CQ9BQE3 449 aa11.93□□□□□ -0.5
USP11-206ENST00000469080 IL20Q9NYY1 176 aa11.93□□□□□ -0.5
USP11-206ENST00000469080 CNOT6Q9ULM6 557 aaKnown RBP11.93□□□□□ -0.5
USP11-206ENST00000469080 TARM1B6A8C7 271 aa11.93□□□□□ -0.5
USP11-206ENST00000469080 MMP20O60882 483 aa11.93□□□□□ -0.5
USP11-206ENST00000469080 TNFRSF21O75509 655 aa11.93□□□□□ -0.5
USP11-206ENST00000469080 STK16O75716 305 aa11.93□□□□□ -0.5
USP11-206ENST00000469080 TRBC1P01850 177 aa11.93□□□□□ -0.5
USP11-206ENST00000469080 EPHX1P07099 455 aa11.93□□□□□ -0.5
USP11-206ENST00000469080 ANXA5P08758 320 aa11.93□□□□□ -0.5
USP11-206ENST00000469080 CYP4B1P13584 511 aa11.93□□□□□ -0.5
USP11-206ENST00000469080 CAPZA2P47755 286 aa11.93□□□□□ -0.5
USP11-206ENST00000469080 RAB33AQ14088 237 aa11.93□□□□□ -0.5
USP11-206ENST00000469080 PTCHD3Q3KNS1 767 aa11.93□□□□□ -0.5
USP11-206ENST00000469080 TMEM31Q5JXX7 168 aa11.93□□□□□ -0.5
USP11-206ENST00000469080 SPANXN4Q5MJ08 99 aa11.93□□□□□ -0.5
USP11-206ENST00000469080 SAMD4BQ5PRF9 694 aaKnown RBP11.93□□□□□ -0.5
USP11-206ENST00000469080 GPRC6AQ5T6X5 926 aa11.93□□□□□ -0.5
USP11-206ENST00000469080 ASTLQ6HA08 431 aaPredicted RBP11.93□□□□□ -0.5
USP11-206ENST00000469080 CCDC149Q6ZUS6 474 aa11.93□□□□□ -0.5
USP11-206ENST00000469080 EFL1Q7Z2Z2 1120 aaKnown RBP11.93□□□□□ -0.5
USP11-206ENST00000469080 PLD3Q8IV08 490 aa11.93□□□□□ -0.5
USP11-206ENST00000469080 CNTN4Q8IWV2 1026 aa11.93□□□□□ -0.5
USP11-206ENST00000469080 CHPFQ8IZ52 775 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms