RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 H3F3CQ6NXT2 135 aa16.38■□□□□ 0.21
RETREG3-210ENST00000590541 TTC23LQ6PF05 361 aa16.38■□□□□ 0.21
RETREG3-210ENST00000590541 ARHGEF39Q8N4T4 335 aa16.38■□□□□ 0.21
RETREG3-210ENST00000590541 MCUQ8NE86 351 aa16.38■□□□□ 0.21
RETREG3-210ENST00000590541 GRK7Q8WTQ7 553 aa16.38■□□□□ 0.21
RETREG3-210ENST00000590541 CA5BP1Q8WTZ4 195 aa16.38■□□□□ 0.21
RETREG3-210ENST00000590541 RAD51AP1Q96B01 352 aa16.38■□□□□ 0.21
RETREG3-210ENST00000590541 VKORC1Q9BQB6 163 aa16.38■□□□□ 0.21
RETREG3-210ENST00000590541 P2RY12Q9H244 342 aa16.38■□□□□ 0.21
RETREG3-210ENST00000590541 XAB2Q9HCS7 855 aaKnown RBP16.38■□□□□ 0.21
RETREG3-210ENST00000590541 ANKRD10Q9NXR5 420 aa16.38■□□□□ 0.21
RETREG3-210ENST00000590541 SAMD15Q9P1V8 674 aa16.38■□□□□ 0.21
RETREG3-210ENST00000590541 MKL2Q9ULH7 1088 aa16.38■□□□□ 0.21
RETREG3-210ENST00000590541 VPS9D1Q9Y2B5 631 aa16.38■□□□□ 0.21
RETREG3-210ENST00000590541 NFS1Q9Y697 457 aa16.38■□□□□ 0.21
RETREG3-210ENST00000590541 IGHV3-20A0A0C4DH32 117 aa16.37■□□□□ 0.21
RETREG3-210ENST00000590541 GOLGA6L10A0A0M3HER8 536 aa16.37■□□□□ 0.21
RETREG3-210ENST00000590541 SEC24DO94855 1032 aaPredicted RBP16.37■□□□□ 0.21
RETREG3-210ENST00000590541 VAPBO95292 243 aa16.37■□□□□ 0.21
RETREG3-210ENST00000590541 C1orf105O95561 183 aa16.37■□□□□ 0.21
RETREG3-210ENST00000590541 C8orf89P0DMQ9 161 aa16.37■□□□□ 0.21
RETREG3-210ENST00000590541 EEF1DP29692 281 aaKnown RBP16.37■□□□□ 0.21
RETREG3-210ENST00000590541 COILP38432 576 aaPredicted RBP16.37■□□□□ 0.21
RETREG3-210ENST00000590541 CD96P40200 585 aa16.37■□□□□ 0.21
RETREG3-210ENST00000590541 KIAA0930Q6ICG6 404 aaPredicted RBP16.37■□□□□ 0.21
RETREG3-210ENST00000590541 SPINK14Q6IE38 97 aa16.37■□□□□ 0.21
RETREG3-210ENST00000590541 CCDC137Q6PK04 289 aaKnown RBP16.37■□□□□ 0.21
RETREG3-210ENST00000590541 KRT222Q8N1A0 295 aa16.37■□□□□ 0.21
RETREG3-210ENST00000590541 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.37■□□□□ 0.21
RETREG3-210ENST00000590541 ACTRT1Q8TDG2 376 aa16.37■□□□□ 0.21
RETREG3-210ENST00000590541 MFSD3Q96ES6 412 aa16.37■□□□□ 0.21
RETREG3-210ENST00000590541 ZNF354BQ96LW1 612 aa16.37■□□□□ 0.21
RETREG3-210ENST00000590541 NPAS2Q99743 824 aa16.37■□□□□ 0.21
RETREG3-210ENST00000590541 DPH7Q9BTV6 452 aa16.37■□□□□ 0.21
RETREG3-210ENST00000590541 SYBUQ9NX95 663 aa16.37■□□□□ 0.21
RETREG3-210ENST00000590541 MARCH4Q9P2E8 410 aaPredicted RBP16.37■□□□□ 0.21
RETREG3-210ENST00000590541 ASB1Q9Y576 335 aa16.37■□□□□ 0.21
RETREG3-210ENST00000590541 A0A0A6YYC8 382 aaPredicted RBP16.36■□□□□ 0.21
RETREG3-210ENST00000590541 I3L1I5 382 aaPredicted RBP16.36■□□□□ 0.21
RETREG3-210ENST00000590541 KIF5CO60282 957 aa16.36■□□□□ 0.21
RETREG3-210ENST00000590541 ANXA5P08758 320 aa16.36■□□□□ 0.21
RETREG3-210ENST00000590541 OGNP20774 298 aaKnown RBP16.36■□□□□ 0.21
RETREG3-210ENST00000590541 FNTAP49354 379 aa16.36■□□□□ 0.21
RETREG3-210ENST00000590541 SNRPNP63162 240 aaKnown RBP16.36■□□□□ 0.21
RETREG3-210ENST00000590541 MAT1AQ00266 395 aaKnown RBP16.36■□□□□ 0.21
RETREG3-210ENST00000590541 FASTKQ14296 549 aaKnown RBP16.36■□□□□ 0.21
RETREG3-210ENST00000590541 OR1C1Q15619 314 aa16.36■□□□□ 0.21
RETREG3-210ENST00000590541 TRIP13Q15645 432 aaPredicted RBP16.36■□□□□ 0.21
RETREG3-210ENST00000590541 TYSND1Q2T9J0 566 aa16.36■□□□□ 0.21
RETREG3-210ENST00000590541 BTBD16Q32M84 506 aa16.36■□□□□ 0.21
RETREG3-210ENST00000590541 PLAG1Q6DJT9 500 aa16.36■□□□□ 0.21
RETREG3-210ENST00000590541 LANCL3Q6ZV70 420 aa16.36■□□□□ 0.21
RETREG3-210ENST00000590541 OTOAQ7RTW8 1153 aa16.36■□□□□ 0.21
RETREG3-210ENST00000590541 FGD2Q7Z6J4 655 aa16.36■□□□□ 0.21
RETREG3-210ENST00000590541 REXO1L1PQ8IX06 675 aa16.36■□□□□ 0.21
RETREG3-210ENST00000590541 SHISA5Q8N114 240 aa16.36■□□□□ 0.21
RETREG3-210ENST00000590541 GHDCQ8N2G8 530 aa16.36■□□□□ 0.21
RETREG3-210ENST00000590541 RAB42Q8N4Z0 105 aa16.36■□□□□ 0.21
RETREG3-210ENST00000590541 OTUD6BQ8N6M0 293 aa16.36■□□□□ 0.21
RETREG3-210ENST00000590541 CSNK1A1LQ8N752 337 aa16.36■□□□□ 0.21
RETREG3-210ENST00000590541 MAGEC3Q8TD91 643 aa16.36■□□□□ 0.21
RETREG3-210ENST00000590541 PPT2Q9UMR5 302 aa16.36■□□□□ 0.21
RETREG3-210ENST00000590541 RUVBL2Q9Y230 463 aaKnown RBP16.36■□□□□ 0.21
RETREG3-210ENST00000590541 NIPBLQ6KC79 2804 aaeCLIP16.36■□□□□ 0.21
RETREG3-210ENST00000590541 FAM237BA0A1B0GVD1 139 aa16.35■□□□□ 0.21
RETREG3-210ENST00000590541 TCRBV7S3A2A0A539 114 aa16.35■□□□□ 0.21
RETREG3-210ENST00000590541 FAM221AA4D161 298 aa16.35■□□□□ 0.21
RETREG3-210ENST00000590541 SDR42E2A6NKP2 422 aa16.35■□□□□ 0.21
RETREG3-210ENST00000590541 MAN1A2O60476 641 aa16.35■□□□□ 0.21
RETREG3-210ENST00000590541 TSPAN12O95859 305 aa16.35■□□□□ 0.21
RETREG3-210ENST00000590541 ESR1P03372 595 aa16.35■□□□□ 0.21
RETREG3-210ENST00000590541 ARNTP27540 789 aa16.35■□□□□ 0.21
RETREG3-210ENST00000590541 CCNFP41002 786 aa16.35■□□□□ 0.21
RETREG3-210ENST00000590541 GARNL3Q5VVW2 1013 aa16.35■□□□□ 0.21
RETREG3-210ENST00000590541 TTC27Q6P3X3 843 aa16.35■□□□□ 0.21
RETREG3-210ENST00000590541 CASC4Q6P4E1 433 aa16.35■□□□□ 0.21
RETREG3-210ENST00000590541 GALNTL5Q7Z4T8 443 aa16.35■□□□□ 0.21
RETREG3-210ENST00000590541 CPEB2Q7Z5Q1 589 aaKnown RBP16.35■□□□□ 0.21
RETREG3-210ENST00000590541 LDB1Q86U70 411 aaPredicted RBP16.35■□□□□ 0.21
RETREG3-210ENST00000590541 CRLF3Q8IUI8 442 aa16.35■□□□□ 0.21
RETREG3-210ENST00000590541 ANP32BQ92688 251 aaKnown RBP16.35■□□□□ 0.21
RETREG3-210ENST00000590541 MS4A14Q96JA4 679 aa16.35■□□□□ 0.21
RETREG3-210ENST00000590541 FOPNLQ96NB1 174 aa16.35■□□□□ 0.21
RETREG3-210ENST00000590541 OSBPL9Q96SU4 736 aa16.35■□□□□ 0.21
RETREG3-210ENST00000590541 PLCD4Q9BRC7 762 aa16.35■□□□□ 0.21
RETREG3-210ENST00000590541 UTP23Q9BRU9 249 aaKnown RBP16.35■□□□□ 0.21
RETREG3-210ENST00000590541 ACAT2Q9BWD1 397 aa16.35■□□□□ 0.21
RETREG3-210ENST00000590541 VN1R1Q9GZP7 353 aa16.35■□□□□ 0.21
RETREG3-210ENST00000590541 NPDC1Q9NQX5 325 aaPredicted RBP16.35■□□□□ 0.21
RETREG3-210ENST00000590541 COQ3Q9NZJ6 369 aa16.35■□□□□ 0.21
RETREG3-210ENST00000590541 GTF3C1Q12789 2109 aa16.34■□□□□ 0.21
RETREG3-210ENST00000590541 SPG11Q96JI7 2443 aa16.34■□□□□ 0.21
RETREG3-210ENST00000590541 IGKV1-8A0A0C4DH67 115 aa16.34■□□□□ 0.21
RETREG3-210ENST00000590541 PHF2O75151 1096 aa16.34■□□□□ 0.21
RETREG3-210ENST00000590541 VPS26AO75436 327 aa16.34■□□□□ 0.21
RETREG3-210ENST00000590541 CD46P15529 392 aa16.34■□□□□ 0.21
RETREG3-210ENST00000590541 ATP5DP30049 168 aa16.34■□□□□ 0.21
RETREG3-210ENST00000590541 CMPK1P30085 196 aa16.34■□□□□ 0.21
RETREG3-210ENST00000590541 DNAJA1P31689 397 aaKnown RBP16.34■□□□□ 0.21
RETREG3-210ENST00000590541 VPS41P49754 854 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms