RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 NEMP2A6NFY4 417 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 GLTPD2A6NH11 291 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 EPOPA6NHQ4 379 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 LRRC72A6NJI9 287 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 SERPINE3A8MV23 424 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 TRIM49D1C9J1S8 452 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 MEIS2O14770 477 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 INPP4BO15327 924 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 PPM1GO15355 546 aaPredicted RBP0.43□□□□□ -2.34
COPB1-212ENST00000534771 TNFSF12O43508 249 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 CREG1O75629 220 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 ZWINTO95229 277 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 IGKV1-17P01599 117 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 IGHV2-70P01814 119 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 CD5P06127 495 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 VPREB1P12018 145 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 IRF2P14316 349 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 GDF1P27539 372 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 PMELP40967 661 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 CETN2P41208 172 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 RGS2P41220 211 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 SLC15A1P46059 708 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 SUOXP51687 545 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 VAMP7P51809 220 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 HMGCS2P54868 508 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 TMF1P82094 1093 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 PRKCEQ02156 737 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 ZNF33BQ06732 778 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 OPCMLQ14982 345 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 KCTD19Q17RG1 926 aaPredicted RBP0.43□□□□□ -2.34
COPB1-212ENST00000534771 KNOP1Q1ED39 458 aaKnown RBP0.43□□□□□ -2.34
COPB1-212ENST00000534771 ASTE1Q2TB18 679 aaPredicted RBP0.43□□□□□ -2.34
COPB1-212ENST00000534771 FAM106AQ4KMX7 169 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 VWA2Q5GFL6 755 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 C10orf62Q5T681 223 aaPredicted RBP0.43□□□□□ -2.34
COPB1-212ENST00000534771 ATP1A1-AS1Q5TC04 95 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 ZNF691Q5VV52 312 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 KIAA0930Q6ICG6 404 aaPredicted RBP0.43□□□□□ -2.34
COPB1-212ENST00000534771 KLHL35Q6PF15 583 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 TMPRSS11BQ86T26 416 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 ZNF589Q86UQ0 364 aaPredicted RBP0.43□□□□□ -2.34
COPB1-212ENST00000534771 TMEM173Q86WV6 379 aaPredicted RBP0.43□□□□□ -2.34
COPB1-212ENST00000534771 ZNF547Q8IVP9 402 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 NAXDQ8IW45 347 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 MMD2Q8IY49 270 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 DIS3L2Q8IYB7 885 aaKnown RBP0.43□□□□□ -2.34
COPB1-212ENST00000534771 FBXO39Q8N4B4 442 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 TPRX1Q8N7U7 411 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 PDILTQ8N807 584 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 NOA1Q8NC60 698 aaKnown RBP0.43□□□□□ -2.34
COPB1-212ENST00000534771 ZNF540Q8NDQ6 660 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 OR9Q2Q8NGE9 314 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 OR1B1Q8NGR6 318 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 ZNF564Q8TBZ8 553 aaPredicted RBP0.43□□□□□ -2.34
COPB1-212ENST00000534771 ADAMTS16Q8TE57 1224 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 PIK3R3Q92569 461 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 ZUFSPQ96AP4 578 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 CMTM3Q96MX0 182 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 RUNDC3BQ96NL0 473 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 ZNF184Q99676 751 aaPredicted RBP0.43□□□□□ -2.34
COPB1-212ENST00000534771 BARD1Q99728 777 aaKnown RBP0.43□□□□□ -2.34
COPB1-212ENST00000534771 SPATC1LQ9H0A9 340 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 SP140LQ9H930 580 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 TBC1D17Q9HA65 648 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 WDR41Q9HAD4 459 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 PREBQ9HCU5 417 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 DPP3Q9NY33 737 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 THYN1Q9P016 225 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 STK26Q9P289 416 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 ARMCX1Q9P291 453 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 SPATA2Q9UM82 520 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 MOKQ9UQ07 419 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 SESN1Q9Y6P5 492 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 COL1A2P08123 1366 aa0.43□□□□□ -2.34
COPB1-212ENST00000534771 ASTN1O14525 1302 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 NEDD4P46934 1319 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 RNF123Q5XPI4 1314 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 RALGAPA1Q6GYQ0 2036 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 FBN1P35555 2871 aaKnown RBP0.42□□□□□ -2.34
COPB1-212ENST00000534771 KIR2DS1A0A191URI9 304 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 TMEM221A6NGB7 291 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 LIPT2A6NK58 231 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 ZFP92A6NM28 416 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 A8MZ25 164 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 MYO1GB0I1T2 1018 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 E2F3O00716 465 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 ZNF861PO60384 105 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 MITFO75030 526 aaPredicted RBP0.42□□□□□ -2.34
COPB1-212ENST00000534771 TSC22D2O75157 780 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 SAP30O75446 220 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 IGHG1P01857 330 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 HSPA1AP0DMV8 641 aaKnown RBP0.42□□□□□ -2.34
COPB1-212ENST00000534771 HSPA1BP0DMV9 641 aaKnown RBP0.42□□□□□ -2.34
COPB1-212ENST00000534771 HAPLN1P10915 354 aaPredicted RBP0.42□□□□□ -2.34
COPB1-212ENST00000534771 MMP9P14780 707 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 CD1DP15813 335 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 GJA1P17302 382 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 C4BPBP20851 252 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 ALDH1B1P30837 517 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 PRKAR2BP31323 418 aa0.42□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms