RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 SNRPNP63162 240 aaKnown RBP5.7□□□□□ -1.5
USP39-213ENST00000467885 GPLD1P80108 840 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 BTKQ06187 659 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 ZNF33BQ06732 778 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 SF3A3Q12874 501 aaKnown RBP eCLIP5.7□□□□□ -1.5
USP39-213ENST00000467885 HYAL2Q12891 473 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 TSTA3Q13630 321 aaPredicted RBP5.7□□□□□ -1.5
USP39-213ENST00000467885 RBBP7Q16576 425 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 AMZ1Q400G9 498 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 SLC9B1Q4ZJI4 515 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 DEPDC1Q5TB30 811 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 FRG2Q64ET8 278 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 GRHL2Q6ISB3 625 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 MED27Q6P2C8 311 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 SPESP1Q6UW49 350 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 TMIGD1Q6UXZ0 262 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 UBE3DQ7Z6J8 389 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 CPLX4Q7Z7G2 160 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 GLRX5Q86SX6 157 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 SLCO6A1Q86UG4 719 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 OOSP2Q86WS3 158 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 PLXDC1Q8IUK5 500 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 PLD3Q8IV08 490 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 MCATQ8IVS2 390 aaKnown RBP5.7□□□□□ -1.5
USP39-213ENST00000467885 OR4N4Q8N0Y3 316 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 CHCHD4Q8N4Q1 142 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 MFSD9Q8NBP5 474 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 OR2T11Q8NH01 316 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 HUS1BQ8NHY5 278 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 IFI44Q8TCB0 444 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 AGR3Q8TD06 166 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 ZNF473Q8WTR7 871 aaKnown RBP5.7□□□□□ -1.5
USP39-213ENST00000467885 CHTF18Q8WVB6 975 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 C11orf24Q96F05 449 aaPredicted RBP5.7□□□□□ -1.5
USP39-213ENST00000467885 THOC1Q96FV9 657 aaKnown RBP5.7□□□□□ -1.5
USP39-213ENST00000467885 ZDHHC12Q96GR4 267 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 TCTN2Q96GX1 697 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 SMIM10Q96HG1 83 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 MAELQ96JY0 434 aaKnown RBP5.7□□□□□ -1.5
USP39-213ENST00000467885 FAR2Q96K12 515 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 CNDP2Q96KP4 475 aaKnown RBP5.7□□□□□ -1.5
USP39-213ENST00000467885 ZNF285Q96NJ3 590 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 TGM7Q96PF1 710 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 FCRL4Q96PJ5 515 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 FRG2BQ96QU4 278 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 MACROD1Q9BQ69 325 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 AIF1LQ9BQI0 150 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 CCDC3Q9BQI4 270 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 EBF4Q9BQW3 602 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 NUDT22Q9BRQ3 303 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 EFCAB11Q9BUY7 163 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 EDEM2Q9BV94 578 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 SLC29A3Q9BZD2 475 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 AICDAQ9GZX7 198 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 KLHL25Q9H0H3 589 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 RABEP2Q9H5N1 569 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 STN1Q9H668 368 aaKnown RBP5.7□□□□□ -1.5
USP39-213ENST00000467885 MEAF6Q9HAF1 191 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 ENAMQ9NRM1 1142 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 ATXN7L1Q9ULK2 861 aaPredicted RBP5.7□□□□□ -1.5
USP39-213ENST00000467885 STK38LQ9Y2H1 464 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 AP1M2Q9Y6Q5 423 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 SPAG17Q6Q759 2223 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 ARID1BQ8NFD5 2236 aaPredicted RBP5.7□□□□□ -1.5
USP39-213ENST00000467885 CABIN1Q9Y6J0 2220 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 IGHV5-10-1A0A0J9YXX1 117 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 A0A0J9YY10 115 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.69□□□□□ -1.5
USP39-213ENST00000467885 ATP6AP2A0A1C7CYW4 349 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 GSAPA4D1B5 854 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 LRIT2A6NDA9 550 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 A8MU76 341 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 MAGEB17A8MXT2 336 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 H0YGG7 62 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 SLC28A1O00337 649 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 HAT1O14929 419 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 PIP5K1BO14986 540 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 TOX3O15405 576 aaPredicted RBP5.69□□□□□ -1.5
USP39-213ENST00000467885 OR1F1O43749 312 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 SRPX2O60687 465 aaPredicted RBP5.69□□□□□ -1.5
USP39-213ENST00000467885 DNAJB6O75190 326 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 ATP6AP2O75787 350 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 DKK1O94907 266 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 CCNDBP1O95273 360 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 ETHE1O95571 254 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 CPNE6O95741 557 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 TGFB1P01137 390 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 KRT6AP02538 564 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 KRT6BP04259 564 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 GP1BAP07359 652 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 PRR35P0CG20 571 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 FOLR1P15328 257 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 CD1EP15812 388 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 MAGP20916 626 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 CXCR2P25025 360 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 EPHA3P29320 983 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 CSF2RBP32927 897 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 AHRP35869 848 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 BCL6P41182 706 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 CAPZBP47756 277 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms