RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 SNAI1O95863 264 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 PEX11BO96011 259 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 F10P00742 488 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 FGBP02675 491 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 FCER2P06734 321 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 ADH4P08319 380 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 OR2T7P0C7T2 308 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 SPATA31D3P0C874 917 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 SMIM6P0DI80 62 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 CBSLP0DN79 551 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 CALCBP10092 127 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 MYF5P13349 255 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 GNAZP19086 355 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 TUBG1P23258 451 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 TEAD1P28347 426 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 HSD11B1P28845 292 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 OR1E1P30953 314 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 RCVRNP35243 200 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 CBSP35520 551 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 PCK1P35558 622 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 KHKP50053 298 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 PRELPP51888 382 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 CACNA2D1P54289 1103 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 PKNOX1P55347 436 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 CDK16Q00536 496 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 COL10A1Q03692 680 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 HGFACQ04756 655 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 VEZF1Q14119 521 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 LRRC32Q14392 662 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 DRAP1Q14919 205 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 EMC2Q15006 297 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 EIF4HQ15056 248 aaKnown RBP4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 BTBD16Q32M84 506 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 NADK2Q4G0N4 442 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 ANO6Q4KMQ2 910 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 EARS2Q5JPH6 523 aaKnown RBP4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 PLEKHS1Q5SXH7 462 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 NKAIN2Q5VXU1 208 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 WSCD1Q658N2 575 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 DCDC5Q6ZRR9 648 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 SPATA31D4Q6ZUB0 917 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 C1orf186Q6ZWK4 172 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 USP30Q70CQ3 517 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 CXXC5Q7LFL8 322 aaKnown RBP4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 SMIM15Q7Z3B0 74 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 P4HA3Q7Z4N8 544 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 FGD2Q7Z6J4 655 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 DPPA2Q7Z7J5 298 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 MRGPRGQ86SM5 289 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 SYVN1Q86TM6 617 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 ULK2Q8IYT8 1036 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 MICU2Q8IYU8 434 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 RNF113BQ8IZP6 322 aaKnown RBP4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 FAM185AQ8N0U4 392 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 SIX6OS1Q8N1H7 587 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 SH2D3CQ8N5H7 860 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 MB21D1Q8N884 522 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 ANKRD44Q8N8A2 993 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 OR2T3Q8NH03 318 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 ZNF596Q8TC21 504 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 RAET1EQ8TD07 263 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 CORO2AQ92828 525 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 MRGPRFQ96AM1 343 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 TMEM186Q96B77 213 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 DGCR14Q96DF8 476 aaKnown RBP4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 C18orf8Q96DM3 657 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 SGTBQ96EQ0 304 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 RNF125Q96EQ8 232 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 MRPL48Q96GC5 212 aaKnown RBP4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 C5orf34Q96MH7 638 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 RILPQ96NA2 401 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 PPP1R2P1Q96PQ5 205 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 TWNKQ96RR1 684 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 C11orf70Q9BRQ4 267 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 PELOQ9BRX2 385 aaKnown RBP4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 GSDMCQ9BYG8 508 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 PKIBQ9C010 78 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 SEMA4CQ9C0C4 833 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 VCX2Q9H322 139 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 MUC13Q9H3R2 512 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 LRRN3Q9H3W5 708 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 PLEKHA4Q9H4M7 779 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 NARFLQ9H6Q4 476 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 KAT14Q9H8E8 782 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 SIAEQ9HAT2 523 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 IL21RQ9HBE5 538 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 MCCC2Q9HCC0 563 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 XPNPEP1Q9NQW7 623 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 ZNF302Q9NR11 478 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 SLC2A4RGQ9NR83 387 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 TLR8Q9NR97 1041 aaKnown RBP4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 TUBG2Q9NRH3 451 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 PRMT7Q9NVM4 692 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 DNAJC17Q9NVM6 304 aaKnown RBP4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 CLEC5AQ9NY25 188 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 PLEK2Q9NYT0 353 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 SH3BP4Q9P0V3 963 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 LEF1Q9UJU2 399 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 CDC42EP3Q9UKI2 254 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms