RNA–Protein interactions for RNA: ENST00000419334.1

EPCAM-203, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-203ENST00000419334 SMIM23A6NLE4 172 aa16.83■□□□□ 0.28
EPCAM-203ENST00000419334 K7EPI3 171 aa16.83■□□□□ 0.28
EPCAM-203ENST00000419334 TK2O00142 265 aa16.83■□□□□ 0.28
EPCAM-203ENST00000419334 CLGNO14967 610 aa16.83■□□□□ 0.28
EPCAM-203ENST00000419334 P2RX6O15547 441 aa16.83■□□□□ 0.28
EPCAM-203ENST00000419334 LCMT2O60294 686 aaKnown RBP16.83■□□□□ 0.28
EPCAM-203ENST00000419334 ONECUT2O95948 504 aa16.83■□□□□ 0.28
EPCAM-203ENST00000419334 CAPN1P07384 714 aa16.83■□□□□ 0.28
EPCAM-203ENST00000419334 GSTA1P08263 222 aa16.83■□□□□ 0.28
EPCAM-203ENST00000419334 C1GALT1C1LP0DN25 315 aa16.83■□□□□ 0.28
EPCAM-203ENST00000419334 ALAS2P22557 587 aa16.83■□□□□ 0.28
EPCAM-203ENST00000419334 AGTR2P50052 363 aa16.83■□□□□ 0.28
EPCAM-203ENST00000419334 RPS15P62841 145 aaKnown RBP16.83■□□□□ 0.28
EPCAM-203ENST00000419334 PFKFB4Q16877 469 aa16.83■□□□□ 0.28
EPCAM-203ENST00000419334 CRTC2Q53ET0 693 aaPredicted RBP16.83■□□□□ 0.28
EPCAM-203ENST00000419334 CYP4X1Q8N118 509 aa16.83■□□□□ 0.28
EPCAM-203ENST00000419334 ARHGEF39Q8N4T4 335 aa16.83■□□□□ 0.28
EPCAM-203ENST00000419334 SNX31Q8N9S9 440 aa16.83■□□□□ 0.28
EPCAM-203ENST00000419334 OR2W6PQ8NHA6 318 aa16.83■□□□□ 0.28
EPCAM-203ENST00000419334 STARD8Q92502 1023 aa16.83■□□□□ 0.28
EPCAM-203ENST00000419334 ROPN1BQ9BZX4 212 aaPredicted RBP16.83■□□□□ 0.28
EPCAM-203ENST00000419334 ROPN1Q9HAT0 212 aaPredicted RBP16.83■□□□□ 0.28
EPCAM-203ENST00000419334 CPSF2Q9P2I0 782 aaKnown RBP16.83■□□□□ 0.28
EPCAM-203ENST00000419334 OPTCQ9UBM4 332 aa16.83■□□□□ 0.28
EPCAM-203ENST00000419334 NDOR1Q9UHB4 597 aa16.83■□□□□ 0.28
EPCAM-203ENST00000419334 CFAP47Q6ZTR5 3102 aa16.83■□□□□ 0.28
EPCAM-203ENST00000419334 A0A1W2PPM1 405 aa16.82■□□□□ 0.28
EPCAM-203ENST00000419334 ZNF891A8MT65 544 aaPredicted RBP16.82■□□□□ 0.28
EPCAM-203ENST00000419334 C9J4A7 227 aa16.82■□□□□ 0.28
EPCAM-203ENST00000419334 GOLGA8RI6L899 631 aa16.82■□□□□ 0.28
EPCAM-203ENST00000419334 OR1F1O43749 312 aa16.82■□□□□ 0.28
EPCAM-203ENST00000419334 MED26O95402 600 aa16.82■□□□□ 0.28
EPCAM-203ENST00000419334 PYGBP11216 843 aa16.82■□□□□ 0.28
EPCAM-203ENST00000419334 KRT15P19012 456 aa16.82■□□□□ 0.28
EPCAM-203ENST00000419334 EPORP19235 508 aa16.82■□□□□ 0.28
EPCAM-203ENST00000419334 ITGAXP20702 1163 aa16.82■□□□□ 0.28
EPCAM-203ENST00000419334 CXCR2P25025 360 aa16.82■□□□□ 0.28
EPCAM-203ENST00000419334 VARSP26640 1264 aaKnown RBP16.82■□□□□ 0.28
EPCAM-203ENST00000419334 AHRP35869 848 aa16.82■□□□□ 0.28
EPCAM-203ENST00000419334 SCTRP47872 440 aa16.82■□□□□ 0.28
EPCAM-203ENST00000419334 MC1RQ01726 317 aa16.82■□□□□ 0.28
EPCAM-203ENST00000419334 IFFO1Q0D2I5 559 aa16.82■□□□□ 0.28
EPCAM-203ENST00000419334 PCBP2Q15366 365 aaKnown RBP eCLIP16.82■□□□□ 0.28
EPCAM-203ENST00000419334 NKAIN1Q4KMZ8 207 aa16.82■□□□□ 0.28
EPCAM-203ENST00000419334 ARHGAP40Q5TG30 622 aa16.82■□□□□ 0.28
EPCAM-203ENST00000419334 METTL2BQ6P1Q9 378 aaKnown RBP16.82■□□□□ 0.28
EPCAM-203ENST00000419334 PRMT9Q6P2P2 845 aa16.82■□□□□ 0.28
EPCAM-203ENST00000419334 SH2D5Q6ZV89 423 aa16.82■□□□□ 0.28
EPCAM-203ENST00000419334 GPR155Q7Z3F1 870 aa16.82■□□□□ 0.28
EPCAM-203ENST00000419334 ASPGQ86U10 573 aa16.82■□□□□ 0.28
EPCAM-203ENST00000419334 TMEM151AQ8N4L1 468 aa16.82■□□□□ 0.28
EPCAM-203ENST00000419334 CAMKVQ8NCB2 501 aa16.82■□□□□ 0.28
EPCAM-203ENST00000419334 ZNF740Q8NDX6 193 aa16.82■□□□□ 0.28
EPCAM-203ENST00000419334 WDR34Q96EX3 536 aa16.82■□□□□ 0.28
EPCAM-203ENST00000419334 MVB12AQ96EY5 273 aa16.82■□□□□ 0.28
EPCAM-203ENST00000419334 RUFY1Q96T51 708 aa16.82■□□□□ 0.28
EPCAM-203ENST00000419334 PITHD1Q9GZP4 211 aaPredicted RBP16.82■□□□□ 0.28
EPCAM-203ENST00000419334 GEMIN8Q9NWZ8 242 aaKnown RBP16.82■□□□□ 0.28
EPCAM-203ENST00000419334 TMEM216Q9P0N5 145 aa16.82■□□□□ 0.28
EPCAM-203ENST00000419334 COPG2Q9UBF2 871 aa16.82■□□□□ 0.28
EPCAM-203ENST00000419334 FARSAQ9Y285 508 aaKnown RBP16.82■□□□□ 0.28
EPCAM-203ENST00000419334 TNPO3Q9Y5L0 923 aaKnown RBP16.82■□□□□ 0.28
EPCAM-203ENST00000419334 MRPS18BQ9Y676 258 aaKnown RBP16.82■□□□□ 0.28
EPCAM-203ENST00000419334 CCDC88CQ9P219 2028 aa16.82■□□□□ 0.28
EPCAM-203ENST00000419334 STX16-NPEPL1H3BU86 382 aa16.81■□□□□ 0.28
EPCAM-203ENST00000419334 STX16O14662 325 aa16.81■□□□□ 0.28
EPCAM-203ENST00000419334 PRAMEF4O60810 478 aa16.81■□□□□ 0.28
EPCAM-203ENST00000419334 SMIM24O75264 130 aa16.81■□□□□ 0.28
EPCAM-203ENST00000419334 H2AFYO75367 372 aaKnown RBP16.81■□□□□ 0.28
EPCAM-203ENST00000419334 KATNA1O75449 491 aa16.81■□□□□ 0.28
EPCAM-203ENST00000419334 RECKO95980 971 aa16.81■□□□□ 0.28
EPCAM-203ENST00000419334 SBK3P0C264 359 aa16.81■□□□□ 0.28
EPCAM-203ENST00000419334 SLC35G6P0C7Q6 338 aa16.81■□□□□ 0.28
EPCAM-203ENST00000419334 PIM1P11309 404 aaPredicted RBP16.81■□□□□ 0.28
EPCAM-203ENST00000419334 PTPN4P29074 926 aa16.81■□□□□ 0.28
EPCAM-203ENST00000419334 PCDH1Q08174 1060 aa16.81■□□□□ 0.28
EPCAM-203ENST00000419334 PWP1Q13610 501 aa16.81■□□□□ 0.28
EPCAM-203ENST00000419334 COL9A2Q14055 689 aaPredicted RBP16.81■□□□□ 0.28
EPCAM-203ENST00000419334 FAM53BQ14153 422 aa16.81■□□□□ 0.28
EPCAM-203ENST00000419334 E2F2Q14209 437 aa16.81■□□□□ 0.28
EPCAM-203ENST00000419334 NCF4Q15080 339 aa16.81■□□□□ 0.28
EPCAM-203ENST00000419334 TBCCQ15814 346 aa16.81■□□□□ 0.28
EPCAM-203ENST00000419334 NDUFA9Q16795 377 aa16.81■□□□□ 0.28
EPCAM-203ENST00000419334 PRAMEF9Q5VWM5 478 aa16.81■□□□□ 0.28
EPCAM-203ENST00000419334 PTGR2Q8N8N7 351 aaPredicted RBP16.81■□□□□ 0.28
EPCAM-203ENST00000419334 ENDOVQ8N8Q3 282 aaKnown RBP16.81■□□□□ 0.28
EPCAM-203ENST00000419334 SLC13A3Q8WWT9 602 aa16.81■□□□□ 0.28
EPCAM-203ENST00000419334 PTCD3Q96EY7 689 aaKnown RBP16.81■□□□□ 0.28
EPCAM-203ENST00000419334 ACTL8Q9H568 366 aa16.81■□□□□ 0.28
EPCAM-203ENST00000419334 NT5DC2Q9H857 520 aa16.81■□□□□ 0.28
EPCAM-203ENST00000419334 SLC22A11Q9NSA0 550 aa16.81■□□□□ 0.28
EPCAM-203ENST00000419334 IFT80Q9P2H3 777 aaPredicted RBP16.81■□□□□ 0.28
EPCAM-203ENST00000419334 DCDC2Q9UHG0 476 aa16.81■□□□□ 0.28
EPCAM-203ENST00000419334 LGALS13Q9UHV8 139 aa16.81■□□□□ 0.28
EPCAM-203ENST00000419334 ZFP69BQ9UJL9 534 aa16.81■□□□□ 0.28
EPCAM-203ENST00000419334 TLDC2A0PJX2 215 aa16.8■□□□□ 0.28
EPCAM-203ENST00000419334 GLRA3O75311 464 aa16.8■□□□□ 0.28
EPCAM-203ENST00000419334 CREG1O75629 220 aa16.8■□□□□ 0.28
EPCAM-203ENST00000419334 CD63P08962 238 aa16.8■□□□□ 0.28
EPCAM-203ENST00000419334 EPB42P16452 691 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms