RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 PRELID3BQ9Y3B1 194 aa12.39□□□□□ -0.43
HERC3-203ENST00000407637 WWP2O00308 870 aa12.38□□□□□ -0.43
HERC3-203ENST00000407637 CA12O43570 354 aa12.38□□□□□ -0.43
HERC3-203ENST00000407637 SGTAO43765 313 aa12.38□□□□□ -0.43
HERC3-203ENST00000407637 SLC43A1O75387 559 aa12.38□□□□□ -0.43
HERC3-203ENST00000407637 CDRT1O95170 752 aa12.38□□□□□ -0.43
HERC3-203ENST00000407637 BMP8BP34820 402 aa12.38□□□□□ -0.43
HERC3-203ENST00000407637 GZMMP51124 257 aa12.38□□□□□ -0.43
HERC3-203ENST00000407637 ERVFC1P60507 584 aa12.38□□□□□ -0.43
HERC3-203ENST00000407637 RPL38P63173 70 aaKnown RBP12.38□□□□□ -0.43
HERC3-203ENST00000407637 AP5B1Q2VPB7 878 aa12.38□□□□□ -0.43
HERC3-203ENST00000407637 INTS6LQ5JSJ4 861 aaKnown RBP12.38□□□□□ -0.43
HERC3-203ENST00000407637 BMP8AQ7Z5Y6 402 aa12.38□□□□□ -0.43
HERC3-203ENST00000407637 KRTCAP2Q8N6L1 136 aa12.38□□□□□ -0.43
HERC3-203ENST00000407637 DUSP18Q8NEJ0 188 aa12.38□□□□□ -0.43
HERC3-203ENST00000407637 OR7G3Q8NG95 312 aa12.38□□□□□ -0.43
HERC3-203ENST00000407637 NT5C3BQ969T7 300 aa12.38□□□□□ -0.43
HERC3-203ENST00000407637 MTERF3Q96E29 417 aa12.38□□□□□ -0.43
HERC3-203ENST00000407637 SORCS2Q96PQ0 1159 aa12.38□□□□□ -0.43
HERC3-203ENST00000407637 RBP7Q96R05 134 aa12.38□□□□□ -0.43
HERC3-203ENST00000407637 ZBTB18Q99592 522 aa12.38□□□□□ -0.43
HERC3-203ENST00000407637 MARVELD1Q9BSK0 173 aa12.38□□□□□ -0.43
HERC3-203ENST00000407637 MRIQ9BWK5 157 aa12.38□□□□□ -0.43
HERC3-203ENST00000407637 FZD8Q9H461 694 aa12.38□□□□□ -0.43
HERC3-203ENST00000407637 PIGUQ9H490 435 aa12.38□□□□□ -0.43
HERC3-203ENST00000407637 TFB2MQ9H5Q4 396 aaKnown RBP12.38□□□□□ -0.43
HERC3-203ENST00000407637 NRBP2Q9NSY0 501 aa12.38□□□□□ -0.43
HERC3-203ENST00000407637 CUEDC1Q9NWM3 386 aaPredicted RBP12.38□□□□□ -0.43
HERC3-203ENST00000407637 CD274Q9NZQ7 290 aa12.38□□□□□ -0.43
HERC3-203ENST00000407637 CSNK1G3Q9Y6M4 447 aa12.38□□□□□ -0.43
HERC3-203ENST00000407637 ANKRD36A6QL64 1941 aa12.38□□□□□ -0.43
HERC3-203ENST00000407637 INMT-MINDY4F8WBC2 141 aa12.38□□□□□ -0.43
HERC3-203ENST00000407637 CDC7O00311 574 aa12.38□□□□□ -0.43
HERC3-203ENST00000407637 CHP2O43745 196 aa12.38□□□□□ -0.43
HERC3-203ENST00000407637 CFDP00746 253 aaPredicted RBP12.38□□□□□ -0.43
HERC3-203ENST00000407637 HLA-DQB2P05538 268 aa12.38□□□□□ -0.43
HERC3-203ENST00000407637 PRKAR1AP10644 381 aa12.38□□□□□ -0.43
HERC3-203ENST00000407637 NUP62P37198 522 aaPredicted RBP12.38□□□□□ -0.43
HERC3-203ENST00000407637 RPL35P42766 123 aaKnown RBP12.38□□□□□ -0.43
HERC3-203ENST00000407637 CLCN4P51793 760 aa12.38□□□□□ -0.43
HERC3-203ENST00000407637 RAB14P61106 215 aa12.38□□□□□ -0.43
HERC3-203ENST00000407637 EIF4HQ15056 248 aaKnown RBP12.38□□□□□ -0.43
HERC3-203ENST00000407637 TRAPPC3LQ5T215 181 aa12.38□□□□□ -0.43
HERC3-203ENST00000407637 WDR48Q8TAF3 677 aa12.38□□□□□ -0.43
HERC3-203ENST00000407637 UTP15Q8TED0 518 aaKnown RBP12.38□□□□□ -0.43
HERC3-203ENST00000407637 ULK4Q96C45 1275 aa12.38□□□□□ -0.43
HERC3-203ENST00000407637 EXOC2Q96KP1 924 aa12.38□□□□□ -0.43
HERC3-203ENST00000407637 ZSWIM3Q96MP5 696 aa12.38□□□□□ -0.43
HERC3-203ENST00000407637 CPPED1Q9BRF8 314 aaPredicted RBP12.38□□□□□ -0.43
HERC3-203ENST00000407637 WACQ9BTA9 647 aa12.38□□□□□ -0.43
HERC3-203ENST00000407637 B3GAT2Q9NPZ5 323 aa12.38□□□□□ -0.43
HERC3-203ENST00000407637 KCMF1Q9P0J7 381 aa12.38□□□□□ -0.43
HERC3-203ENST00000407637 ZNF222Q9UK12 451 aa12.38□□□□□ -0.43
HERC3-203ENST00000407637 KCNMB2Q9Y691 235 aa12.38□□□□□ -0.43
HERC3-203ENST00000407637 GBF1Q92538 1859 aa12.38□□□□□ -0.43
HERC3-203ENST00000407637 COL11A1P12107 1806 aaPredicted RBP12.37□□□□□ -0.43
HERC3-203ENST00000407637 NPEPPSL1A6NEC2 478 aa12.37□□□□□ -0.43
HERC3-203ENST00000407637 ZNF670-ZNF695F2Z2N8 137 aa12.37□□□□□ -0.43
HERC3-203ENST00000407637 GTPBP1O00178 669 aaKnown RBP12.37□□□□□ -0.43
HERC3-203ENST00000407637 ZNF81P51508 661 aa12.37□□□□□ -0.43
HERC3-203ENST00000407637 ERVPABLB-1P60509 514 aa12.37□□□□□ -0.43
HERC3-203ENST00000407637 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.37□□□□□ -0.43
HERC3-203ENST00000407637 CSTF3Q12996 717 aaKnown RBP12.37□□□□□ -0.43
HERC3-203ENST00000407637 ELOAQ14241 798 aaKnown RBP12.37□□□□□ -0.43
HERC3-203ENST00000407637 SPDYE7PQ495Y7 208 aa12.37□□□□□ -0.43
HERC3-203ENST00000407637 DCAF15Q66K64 600 aa12.37□□□□□ -0.43
HERC3-203ENST00000407637 RANBP10Q6VN20 620 aa12.37□□□□□ -0.43
HERC3-203ENST00000407637 MILR1Q7Z6M3 343 aa12.37□□□□□ -0.43
HERC3-203ENST00000407637 GHDCQ8N2G8 530 aa12.37□□□□□ -0.43
HERC3-203ENST00000407637 Q8N402 240 aa12.37□□□□□ -0.43
HERC3-203ENST00000407637 OR8K3Q8NH51 312 aa12.37□□□□□ -0.43
HERC3-203ENST00000407637 C9orf43Q8TAL5 461 aaPredicted RBP12.37□□□□□ -0.43
HERC3-203ENST00000407637 STAG3L4Q8TBR4 150 aa12.37□□□□□ -0.43
HERC3-203ENST00000407637 CREB3L4Q8TEY5 395 aa12.37□□□□□ -0.43
HERC3-203ENST00000407637 SLC16A10Q8TF71 515 aa12.37□□□□□ -0.43
HERC3-203ENST00000407637 TSGA13Q96PP4 275 aa12.37□□□□□ -0.43
HERC3-203ENST00000407637 PPP1R16BQ96T49 567 aa12.37□□□□□ -0.43
HERC3-203ENST00000407637 C12orf57Q99622 126 aa12.37□□□□□ -0.43
HERC3-203ENST00000407637 SEC22CQ9BRL7 303 aa12.37□□□□□ -0.43
HERC3-203ENST00000407637 CD244Q9BZW8 370 aa12.37□□□□□ -0.43
HERC3-203ENST00000407637 SHARPINQ9H0F6 387 aa12.37□□□□□ -0.43
HERC3-203ENST00000407637 CLEC4MQ9H2X3 399 aaPredicted RBP12.37□□□□□ -0.43
HERC3-203ENST00000407637 RGS17Q9UGC6 210 aaPredicted RBP12.37□□□□□ -0.43
HERC3-203ENST00000407637 CCNL1Q9UK58 526 aaPredicted RBP12.37□□□□□ -0.43
HERC3-203ENST00000407637 TNFSF13BQ9Y275 285 aa12.37□□□□□ -0.43
HERC3-203ENST00000407637 KCTD3Q9Y597 815 aa12.37□□□□□ -0.43
HERC3-203ENST00000407637 FKBP7Q9Y680 259 aa12.37□□□□□ -0.43
HERC3-203ENST00000407637 hCG_1807616A0A1W2PRN6 198 aa12.37□□□□□ -0.43
HERC3-203ENST00000407637 B3GALT4O96024 378 aa12.37□□□□□ -0.43
HERC3-203ENST00000407637 LHCGRP22888 699 aa12.37□□□□□ -0.43
HERC3-203ENST00000407637 POU1F1P28069 291 aa12.37□□□□□ -0.43
HERC3-203ENST00000407637 ICAM3P32942 547 aa12.37□□□□□ -0.43
HERC3-203ENST00000407637 CRYBB2P43320 205 aa12.37□□□□□ -0.43
HERC3-203ENST00000407637 RPL34P49207 117 aaKnown RBP12.37□□□□□ -0.43
HERC3-203ENST00000407637 AKR1D1P51857 326 aa12.37□□□□□ -0.43
HERC3-203ENST00000407637 MBTD1Q05BQ5 628 aa12.37□□□□□ -0.43
HERC3-203ENST00000407637 DDI2Q5TDH0 399 aa12.37□□□□□ -0.43
HERC3-203ENST00000407637 ATG9BQ674R7 924 aa12.37□□□□□ -0.43
HERC3-203ENST00000407637 RETSATQ6NUM9 610 aa12.37□□□□□ -0.43
HERC3-203ENST00000407637 TFAP2EQ6VUC0 442 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms