RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 TMPRSS11BQ86T26 416 aa17.09■□□□□ 0.33
SNRPA1-201ENST00000254193 ASPGQ86U10 573 aa17.09■□□□□ 0.33
SNRPA1-201ENST00000254193 CENPLQ8N0S6 344 aaPredicted RBP17.09■□□□□ 0.33
SNRPA1-201ENST00000254193 ZNF843Q8N446 348 aa17.09■□□□□ 0.33
SNRPA1-201ENST00000254193 MFSD9Q8NBP5 474 aa17.09■□□□□ 0.33
SNRPA1-201ENST00000254193 STAG3L4Q8TBR4 150 aa17.09■□□□□ 0.33
SNRPA1-201ENST00000254193 SLC13A3Q8WWT9 602 aa17.09■□□□□ 0.33
SNRPA1-201ENST00000254193 TM4SF19Q96DZ7 209 aa17.09■□□□□ 0.33
SNRPA1-201ENST00000254193 TMEM79Q9BSE2 394 aa17.09■□□□□ 0.33
SNRPA1-201ENST00000254193 TRIM55Q9BYV6 548 aa17.09■□□□□ 0.33
SNRPA1-201ENST00000254193 DRC3Q9H069 523 aa17.09■□□□□ 0.33
SNRPA1-201ENST00000254193 ADNPQ9H2P0 1102 aa17.09■□□□□ 0.33
SNRPA1-201ENST00000254193 CDC14AQ9UNH5 594 aa17.09■□□□□ 0.33
SNRPA1-201ENST00000254193 IKBKGQ9Y6K9 419 aa17.09■□□□□ 0.33
SNRPA1-201ENST00000254193 FFAR3O14843 346 aa17.08■□□□□ 0.32
SNRPA1-201ENST00000254193 GPR42O15529 346 aa17.08■□□□□ 0.32
SNRPA1-201ENST00000254193 FOXS1O43638 330 aa17.08■□□□□ 0.32
SNRPA1-201ENST00000254193 MYBL2P10244 700 aa17.08■□□□□ 0.32
SNRPA1-201ENST00000254193 FBLP22087 321 aaKnown RBP17.08■□□□□ 0.32
SNRPA1-201ENST00000254193 VARSP26640 1264 aaKnown RBP17.08■□□□□ 0.32
SNRPA1-201ENST00000254193 GLRBP48167 497 aa17.08■□□□□ 0.32
SNRPA1-201ENST00000254193 HSPA7P48741 367 aa17.08■□□□□ 0.32
SNRPA1-201ENST00000254193 SERPINB8P50452 374 aa17.08■□□□□ 0.32
SNRPA1-201ENST00000254193 NDUFA9Q16795 377 aa17.08■□□□□ 0.32
SNRPA1-201ENST00000254193 CDKL4Q5MAI5 379 aa17.08■□□□□ 0.32
SNRPA1-201ENST00000254193 CCDC91Q7Z6B0 441 aa17.08■□□□□ 0.32
SNRPA1-201ENST00000254193 MRGPREQ86SM8 312 aa17.08■□□□□ 0.32
SNRPA1-201ENST00000254193 RAB43Q86YS6 212 aa17.08■□□□□ 0.32
SNRPA1-201ENST00000254193 KLHDC8AQ8IYD2 350 aa17.08■□□□□ 0.32
SNRPA1-201ENST00000254193 PRSS58Q8IYP2 241 aa17.08■□□□□ 0.32
SNRPA1-201ENST00000254193 TCAIMQ8N3R3 496 aa17.08■□□□□ 0.32
SNRPA1-201ENST00000254193 KCT2Q8NC54 265 aa17.08■□□□□ 0.32
SNRPA1-201ENST00000254193 DCAKDQ8WVC6 231 aa17.08■□□□□ 0.32
SNRPA1-201ENST00000254193 MOCOSQ96EN8 888 aa17.08■□□□□ 0.32
SNRPA1-201ENST00000254193 MMABQ96EY8 250 aaPredicted RBP17.08■□□□□ 0.32
SNRPA1-201ENST00000254193 SPSB2Q99619 263 aa17.08■□□□□ 0.32
SNRPA1-201ENST00000254193 YIPF2Q9BWQ6 316 aa17.08■□□□□ 0.32
SNRPA1-201ENST00000254193 TXLNGYQ9BZA5 131 aa17.08■□□□□ 0.32
SNRPA1-201ENST00000254193 VPS11Q9H270 941 aa17.08■□□□□ 0.32
SNRPA1-201ENST00000254193 SLC26A1Q9H2B4 701 aa17.08■□□□□ 0.32
SNRPA1-201ENST00000254193 SOX17Q9H6I2 414 aaPredicted RBP17.08■□□□□ 0.32
SNRPA1-201ENST00000254193 WDR54Q9H977 334 aa17.08■□□□□ 0.32
SNRPA1-201ENST00000254193 PELI2Q9HAT8 420 aa17.08■□□□□ 0.32
SNRPA1-201ENST00000254193 PTBP2Q9UKA9 531 aaKnown RBP17.08■□□□□ 0.32
SNRPA1-201ENST00000254193 TRBC2A0A5B9 178 aa17.07■□□□□ 0.32
SNRPA1-201ENST00000254193 VSTM2BA6NLU5 285 aa17.07■□□□□ 0.32
SNRPA1-201ENST00000254193 SUPT3HB4E1H0 165 aa17.07■□□□□ 0.32
SNRPA1-201ENST00000254193 UBXN8O00124 270 aa17.07■□□□□ 0.32
SNRPA1-201ENST00000254193 RIPK2O43353 540 aa17.07■□□□□ 0.32
SNRPA1-201ENST00000254193 KERAO60938 352 aa17.07■□□□□ 0.32
SNRPA1-201ENST00000254193 SUPT3HO75486 399 aa17.07■□□□□ 0.32
SNRPA1-201ENST00000254193 RFPL1O75677 317 aa17.07■□□□□ 0.32
SNRPA1-201ENST00000254193 S100BP04271 92 aaPredicted RBP17.07■□□□□ 0.32
SNRPA1-201ENST00000254193 SERPIND1P05546 499 aa17.07■□□□□ 0.32
SNRPA1-201ENST00000254193 ABHD2P08910 425 aa17.07■□□□□ 0.32
SNRPA1-201ENST00000254193 SFTPCP11686 197 aa17.07■□□□□ 0.32
SNRPA1-201ENST00000254193 GGT5P36269 586 aa17.07■□□□□ 0.32
SNRPA1-201ENST00000254193 SCTRP47872 440 aa17.07■□□□□ 0.32
SNRPA1-201ENST00000254193 SERPINB9P50453 376 aa17.07■□□□□ 0.32
SNRPA1-201ENST00000254193 REEP5Q00765 189 aa17.07■□□□□ 0.32
SNRPA1-201ENST00000254193 DSG2Q14126 1118 aa17.07■□□□□ 0.32
SNRPA1-201ENST00000254193 FAM83EQ2M2I3 478 aa17.07■□□□□ 0.32
SNRPA1-201ENST00000254193 TMEM214Q6NUQ4 689 aaKnown RBP17.07■□□□□ 0.32
SNRPA1-201ENST00000254193 SLCO4C1Q6ZQN7 724 aa17.07■□□□□ 0.32
SNRPA1-201ENST00000254193 PRSS41Q7RTY9 318 aa17.07■□□□□ 0.32
SNRPA1-201ENST00000254193 PPP1R32Q7Z5V6 425 aa17.07■□□□□ 0.32
SNRPA1-201ENST00000254193 APLFQ8IW19 511 aaPredicted RBP17.07■□□□□ 0.32
SNRPA1-201ENST00000254193 AMER3Q8N944 861 aa17.07■□□□□ 0.32
SNRPA1-201ENST00000254193 CAMKVQ8NCB2 501 aa17.07■□□□□ 0.32
SNRPA1-201ENST00000254193 PDPRQ8NCN5 879 aa17.07■□□□□ 0.32
SNRPA1-201ENST00000254193 OR9A4Q8NGU2 314 aa17.07■□□□□ 0.32
SNRPA1-201ENST00000254193 ZCCHC10Q8TBK6 192 aa17.07■□□□□ 0.32
SNRPA1-201ENST00000254193 MVB12AQ96EY5 273 aa17.07■□□□□ 0.32
SNRPA1-201ENST00000254193 ABHD17AQ96GS6 310 aa17.07■□□□□ 0.32
SNRPA1-201ENST00000254193 ATOH8Q96SQ7 321 aa17.07■□□□□ 0.32
SNRPA1-201ENST00000254193 SARGQ9BW04 601 aa17.07■□□□□ 0.32
SNRPA1-201ENST00000254193 ING2Q9H160 280 aa17.07■□□□□ 0.32
SNRPA1-201ENST00000254193 ZNF71Q9NQZ8 489 aaPredicted RBP17.07■□□□□ 0.32
SNRPA1-201ENST00000254193 DNAJC11Q9NVH1 559 aa17.07■□□□□ 0.32
SNRPA1-201ENST00000254193 TRPC4Q9UBN4 977 aa17.07■□□□□ 0.32
SNRPA1-201ENST00000254193 ZNF282Q9UDV7 671 aaPredicted RBP17.07■□□□□ 0.32
SNRPA1-201ENST00000254193 TUBD1Q9UJT1 453 aa17.07■□□□□ 0.32
SNRPA1-201ENST00000254193 SEC16AO15027 2179 aa17.06■□□□□ 0.32
SNRPA1-201ENST00000254193 EXOC1LA0A1B0GW35 172 aa17.06■□□□□ 0.32
SNRPA1-201ENST00000254193 NDUFS4O43181 175 aa17.06■□□□□ 0.32
SNRPA1-201ENST00000254193 ZNF500O60304 480 aaPredicted RBP17.06■□□□□ 0.32
SNRPA1-201ENST00000254193 STK16O75716 305 aa17.06■□□□□ 0.32
SNRPA1-201ENST00000254193 KRT38O76015 456 aa17.06■□□□□ 0.32
SNRPA1-201ENST00000254193 IPO13O94829 963 aaKnown RBP17.06■□□□□ 0.32
SNRPA1-201ENST00000254193 GNAZP19086 355 aa17.06■□□□□ 0.32
SNRPA1-201ENST00000254193 AGTR2P50052 363 aa17.06■□□□□ 0.32
SNRPA1-201ENST00000254193 CCL11P51671 97 aa17.06■□□□□ 0.32
SNRPA1-201ENST00000254193 MAT1AQ00266 395 aaKnown RBP17.06■□□□□ 0.32
SNRPA1-201ENST00000254193 OCA2Q04671 838 aa17.06■□□□□ 0.32
SNRPA1-201ENST00000254193 NFATC3Q12968 1075 aa17.06■□□□□ 0.32
SNRPA1-201ENST00000254193 CDC16Q13042 620 aa17.06■□□□□ 0.32
SNRPA1-201ENST00000254193 FAM53BQ14153 422 aa17.06■□□□□ 0.32
SNRPA1-201ENST00000254193 RBBP5Q15291 538 aaKnown RBP17.06■□□□□ 0.32
SNRPA1-201ENST00000254193 SYT16Q17RD7 645 aa17.06■□□□□ 0.32
SNRPA1-201ENST00000254193 VWA2Q5GFL6 755 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms