RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 KHNYNO15037 678 aaKnown RBP14.15□□□□□ -0.14
SHKBP1-211ENST00000595945 RGS14O43566 566 aa14.15□□□□□ -0.14
SHKBP1-211ENST00000595945 RSL1D1O76021 490 aaKnown RBP14.15□□□□□ -0.14
SHKBP1-211ENST00000595945 UBXN7O94888 489 aa14.15□□□□□ -0.14
SHKBP1-211ENST00000595945 PROS1P07225 676 aa14.15□□□□□ -0.14
SHKBP1-211ENST00000595945 RETP07949 1114 aa14.15□□□□□ -0.14
SHKBP1-211ENST00000595945 ALDOCP09972 364 aaKnown RBP14.15□□□□□ -0.14
SHKBP1-211ENST00000595945 ZNF883P0CG24 379 aa14.15□□□□□ -0.14
SHKBP1-211ENST00000595945 ALPPL2P10696 532 aa14.15□□□□□ -0.14
SHKBP1-211ENST00000595945 ENGP17813 658 aa14.15□□□□□ -0.14
SHKBP1-211ENST00000595945 PIK3CBP42338 1070 aa14.15□□□□□ -0.14
SHKBP1-211ENST00000595945 CAPZBP47756 277 aa14.15□□□□□ -0.14
SHKBP1-211ENST00000595945 SCTRP47872 440 aa14.15□□□□□ -0.14
SHKBP1-211ENST00000595945 LSSP48449 732 aa14.15□□□□□ -0.14
SHKBP1-211ENST00000595945 MRPL19P49406 292 aaKnown RBP14.15□□□□□ -0.14
SHKBP1-211ENST00000595945 HMGCS1Q01581 520 aa14.15□□□□□ -0.14
SHKBP1-211ENST00000595945 TCF15Q12870 199 aa14.15□□□□□ -0.14
SHKBP1-211ENST00000595945 ZSCAN26Q16670 478 aa14.15□□□□□ -0.14
SHKBP1-211ENST00000595945 GALNTL6Q49A17 601 aa14.15□□□□□ -0.14
SHKBP1-211ENST00000595945 KLHL35Q6PF15 583 aa14.15□□□□□ -0.14
SHKBP1-211ENST00000595945 CLNKQ7Z7G1 428 aa14.15□□□□□ -0.14
SHKBP1-211ENST00000595945 TRIM73Q86UV7 250 aa14.15□□□□□ -0.14
SHKBP1-211ENST00000595945 RNF175Q8N4F7 328 aa14.15□□□□□ -0.14
SHKBP1-211ENST00000595945 ANKRD53Q8N9V6 530 aa14.15□□□□□ -0.14
SHKBP1-211ENST00000595945 SUMF1Q8NBK3 374 aa14.15□□□□□ -0.14
SHKBP1-211ENST00000595945 PRSS33Q8NF86 280 aa14.15□□□□□ -0.14
SHKBP1-211ENST00000595945 OR10G6Q8NH81 332 aa14.15□□□□□ -0.14
SHKBP1-211ENST00000595945 HUS1BQ8NHY5 278 aa14.15□□□□□ -0.14
SHKBP1-211ENST00000595945 ERP27Q96DN0 273 aa14.15□□□□□ -0.14
SHKBP1-211ENST00000595945 PPP3R2Q96LZ3 170 aa14.15□□□□□ -0.14
SHKBP1-211ENST00000595945 CATSPER2Q96P56 530 aa14.15□□□□□ -0.14
SHKBP1-211ENST00000595945 SLC38A3Q99624 504 aa14.15□□□□□ -0.14
SHKBP1-211ENST00000595945 LRFN3Q9BTN0 628 aa14.15□□□□□ -0.14
SHKBP1-211ENST00000595945 CCDC106Q9BWC9 280 aa14.15□□□□□ -0.14
SHKBP1-211ENST00000595945 ABCG4Q9H172 646 aa14.15□□□□□ -0.14
SHKBP1-211ENST00000595945 EVA1BQ9NVM1 165 aa14.15□□□□□ -0.14
SHKBP1-211ENST00000595945 ADGRE2Q9UHX3 823 aa14.15□□□□□ -0.14
SHKBP1-211ENST00000595945 ZFP69BQ9UJL9 534 aa14.15□□□□□ -0.14
SHKBP1-211ENST00000595945 COL5A1P20908 1838 aaPredicted RBP14.15□□□□□ -0.14
SHKBP1-211ENST00000595945 CROCCQ5TZA2 2017 aa14.14□□□□□ -0.15
SHKBP1-211ENST00000595945 A0A0J9YY10 115 aa14.14□□□□□ -0.15
SHKBP1-211ENST00000595945 GSAPA4D1B5 854 aa14.14□□□□□ -0.15
SHKBP1-211ENST00000595945 RHPN2P1A8MT19 583 aa14.14□□□□□ -0.15
SHKBP1-211ENST00000595945 CAPN14A8MX76 684 aa14.14□□□□□ -0.15
SHKBP1-211ENST00000595945 HAT1O14929 419 aa14.14□□□□□ -0.15
SHKBP1-211ENST00000595945 UBDO15205 165 aa14.14□□□□□ -0.15
SHKBP1-211ENST00000595945 SIGLEC6O43699 453 aa14.14□□□□□ -0.15
SHKBP1-211ENST00000595945 LCMT2O60294 686 aaKnown RBP14.14□□□□□ -0.15
SHKBP1-211ENST00000595945 PEX11AO75192 247 aa14.14□□□□□ -0.15
SHKBP1-211ENST00000595945 GLB1P16278 677 aa14.14□□□□□ -0.15
SHKBP1-211ENST00000595945 TYRP1P17643 537 aa14.14□□□□□ -0.15
SHKBP1-211ENST00000595945 SERPINB1P30740 379 aa14.14□□□□□ -0.15
SHKBP1-211ENST00000595945 GPR3P46089 330 aa14.14□□□□□ -0.15
SHKBP1-211ENST00000595945 ATP4BP51164 291 aa14.14□□□□□ -0.15
SHKBP1-211ENST00000595945 PPP1CAP62136 330 aa14.14□□□□□ -0.15
SHKBP1-211ENST00000595945 ERVK-8P63133 956 aa14.14□□□□□ -0.15
SHKBP1-211ENST00000595945 IRX1P78414 480 aaPredicted RBP14.14□□□□□ -0.15
SHKBP1-211ENST00000595945 RELAQ04206 551 aa14.14□□□□□ -0.15
SHKBP1-211ENST00000595945 EMX2Q04743 252 aa14.14□□□□□ -0.15
SHKBP1-211ENST00000595945 NR6A1Q15406 480 aa14.14□□□□□ -0.15
SHKBP1-211ENST00000595945 CCDC6Q16204 474 aa14.14□□□□□ -0.15
SHKBP1-211ENST00000595945 ATP6AP1LQ52LC2 224 aa14.14□□□□□ -0.15
SHKBP1-211ENST00000595945 FCRL6Q6DN72 434 aa14.14□□□□□ -0.15
SHKBP1-211ENST00000595945 TCEAL6Q6IPX3 200 aa14.14□□□□□ -0.15
SHKBP1-211ENST00000595945 SPATA19Q7Z5L4 167 aa14.14□□□□□ -0.15
SHKBP1-211ENST00000595945 ZFAND4Q86XD8 727 aa14.14□□□□□ -0.15
SHKBP1-211ENST00000595945 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.14□□□□□ -0.15
SHKBP1-211ENST00000595945 TCEAL3Q969E4 200 aa14.14□□□□□ -0.15
SHKBP1-211ENST00000595945 CMTM7Q96FZ5 175 aa14.14□□□□□ -0.15
SHKBP1-211ENST00000595945 FCRL1Q96LA6 429 aa14.14□□□□□ -0.15
SHKBP1-211ENST00000595945 RAB33BQ9H082 229 aa14.14□□□□□ -0.15
SHKBP1-211ENST00000595945 EPB41L1Q9H4G0 881 aa14.14□□□□□ -0.15
SHKBP1-211ENST00000595945 DMRT3Q9NQL9 472 aa14.14□□□□□ -0.15
SHKBP1-211ENST00000595945 ASIC5Q9NY37 505 aa14.14□□□□□ -0.15
SHKBP1-211ENST00000595945 LRIT1Q9P2V4 623 aa14.14□□□□□ -0.15
SHKBP1-211ENST00000595945 EPHA6Q9UF33 1036 aa14.14□□□□□ -0.15
SHKBP1-211ENST00000595945 GMEB2Q9UKD1 530 aa14.14□□□□□ -0.15
SHKBP1-211ENST00000595945 PADI4Q9UM07 663 aa14.14□□□□□ -0.15
SHKBP1-211ENST00000595945 COPG1Q9Y678 874 aaKnown RBP14.14□□□□□ -0.15
SHKBP1-211ENST00000595945 VPS13AQ96RL7 3174 aa14.13□□□□□ -0.15
SHKBP1-211ENST00000595945 FEZF1A0PJY2 475 aa14.13□□□□□ -0.15
SHKBP1-211ENST00000595945 MAGEB17A8MXT2 336 aa14.13□□□□□ -0.15
SHKBP1-211ENST00000595945 SLC22A2O15244 555 aa14.13□□□□□ -0.15
SHKBP1-211ENST00000595945 NRP2O60462 931 aa14.13□□□□□ -0.15
SHKBP1-211ENST00000595945 ETHE1O95571 254 aa14.13□□□□□ -0.15
SHKBP1-211ENST00000595945 TBX6O95947 436 aaPredicted RBP14.13□□□□□ -0.15
SHKBP1-211ENST00000595945 PCNAP12004 261 aa14.13□□□□□ -0.15
SHKBP1-211ENST00000595945 PNLIPP16233 465 aa14.13□□□□□ -0.15
SHKBP1-211ENST00000595945 NCF2P19878 526 aaPredicted RBP14.13□□□□□ -0.15
SHKBP1-211ENST00000595945 ADSLP30566 484 aaPredicted RBP14.13□□□□□ -0.15
SHKBP1-211ENST00000595945 BCL6P41182 706 aa14.13□□□□□ -0.15
SHKBP1-211ENST00000595945 RPS13P62277 151 aaKnown RBP14.13□□□□□ -0.15
SHKBP1-211ENST00000595945 DDX39BQ13838 428 aaKnown RBP14.13□□□□□ -0.15
SHKBP1-211ENST00000595945 UBAP2LQ14157 1087 aaKnown RBP14.13□□□□□ -0.15
SHKBP1-211ENST00000595945 KRT72Q14CN4 511 aa14.13□□□□□ -0.15
SHKBP1-211ENST00000595945 NAA25Q14CX7 972 aa14.13□□□□□ -0.15
SHKBP1-211ENST00000595945 KIAA0040Q15053 153 aa14.13□□□□□ -0.15
SHKBP1-211ENST00000595945 IMPG1Q17R60 797 aa14.13□□□□□ -0.15
SHKBP1-211ENST00000595945 AP5B1Q2VPB7 878 aa14.13□□□□□ -0.15
SHKBP1-211ENST00000595945 FIGLAQ6QHK4 219 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms